RNA–Protein interactions for RNA: ENST00000629717.1

NRXN1-231, Transcript of neurexin 1, human

TSL 2

Gene NRXN1, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-231	ENST00000629717	C8orf37	Q96NL8	207 aa		12.67	□□□□□ -0.38
NRXN1-231	ENST00000629717	ADGRB2	O60241	1585 aa		12.67	□□□□□ -0.38
NRXN1-231	ENST00000629717	AFF2	P51816	1311 aa		12.66	□□□□□ -0.38
NRXN1-231	ENST00000629717	SPATA31A3	Q5VYP0	1347 aa		12.66	□□□□□ -0.38
NRXN1-231	ENST00000629717	KIAA1210	Q9ULL0	1709 aa		12.65	□□□□□ -0.38
NRXN1-231	ENST00000629717	KIF1A	Q12756	1690 aa		12.65	□□□□□ -0.38
NRXN1-231	ENST00000629717	NKX1-1	Q15270	411 aa	Predicted RBP	12.65	□□□□□ -0.38
NRXN1-231	ENST00000629717	PMFBP1	Q8TBY8	1022 aa		12.65	□□□□□ -0.38
NRXN1-231	ENST00000629717	NGLY1	Q96IV0	654 aa		12.65	□□□□□ -0.38
NRXN1-231	ENST00000629717	PRR36	Q9H6K5	1346 aa		12.64	□□□□□ -0.39
NRXN1-231	ENST00000629717	EFCAB3	Q8N7B9	438 aa		12.64	□□□□□ -0.39
NRXN1-231	ENST00000629717	GTF3C3	Q9Y5Q9	886 aa		12.64	□□□□□ -0.39
NRXN1-231	ENST00000629717	TULP4	Q9NRJ4	1543 aa		12.63	□□□□□ -0.39
NRXN1-231	ENST00000629717	COL22A1	Q8NFW1	1626 aa	Predicted RBP	12.63	□□□□□ -0.39
NRXN1-231	ENST00000629717	RXRB	P28702	533 aa		12.63	□□□□□ -0.39
NRXN1-231	ENST00000629717	FNBP4	Q8N3X1	1017 aa	Predicted RBP	12.63	□□□□□ -0.39
NRXN1-231	ENST00000629717	NUDT16	Q96DE0	195 aa	Known RBP	12.63	□□□□□ -0.39
NRXN1-231	ENST00000629717	CDK19	Q9BWU1	502 aa		12.63	□□□□□ -0.39
NRXN1-231	ENST00000629717	SBNO1	A3KN83	1393 aa		12.63	□□□□□ -0.39
NRXN1-231	ENST00000629717	QTRT2	Q9H974	415 aa	Known RBP	12.62	□□□□□ -0.39
NRXN1-231	ENST00000629717	ARHGEF28	Q8N1W1	1705 aa	Known RBP	12.62	□□□□□ -0.39
NRXN1-231	ENST00000629717	USP32	Q8NFA0	1604 aa		12.62	□□□□□ -0.39
NRXN1-231	ENST00000629717	TNS3	Q68CZ2	1445 aa		12.62	□□□□□ -0.39
NRXN1-231	ENST00000629717	CENPJ	Q9HC77	1338 aa	Predicted RBP	12.62	□□□□□ -0.39
NRXN1-231	ENST00000629717	GPRASP1	Q5JY77	1395 aa		12.61	□□□□□ -0.39
NRXN1-231	ENST00000629717	NGDN	Q8NEJ9	315 aa	Known RBP	12.61	□□□□□ -0.39
NRXN1-231	ENST00000629717	ARHGEF10	O15013	1369 aa		12.6	□□□□□ -0.39
NRXN1-231	ENST00000629717	USP21	Q9UK80	565 aa		12.6	□□□□□ -0.39
NRXN1-231	ENST00000629717	ATP7B	P35670	1465 aa		12.59	□□□□□ -0.39
NRXN1-231	ENST00000629717	ROCK2	O75116	1388 aa	Known RBP	12.59	□□□□□ -0.39
NRXN1-231	ENST00000629717	RGPD8	O14715	1765 aa	Predicted RBP	12.59	□□□□□ -0.39
NRXN1-231	ENST00000629717	RBM6	P78332	1123 aa	Known RBP	12.59	□□□□□ -0.39
NRXN1-231	ENST00000629717	LMOD2	Q6P5Q4	547 aa		12.59	□□□□□ -0.39
NRXN1-231	ENST00000629717	BCL11B	Q9C0K0	894 aa	Predicted RBP	12.59	□□□□□ -0.39
NRXN1-231	ENST00000629717	TONSL	Q96HA7	1378 aa		12.58	□□□□□ -0.4
NRXN1-231	ENST00000629717	NBPF8	Q3BBV2	869 aa		12.58	□□□□□ -0.4
NRXN1-231	ENST00000629717	PLEKHG3	A1L390	1219 aa		12.57	□□□□□ -0.4
NRXN1-231	ENST00000629717	SRPK2	P78362	688 aa	Known RBP	12.57	□□□□□ -0.4
NRXN1-231	ENST00000629717	DPY19L2	Q6NUT2	758 aa		12.57	□□□□□ -0.4
NRXN1-231	ENST00000629717	CABLES1	Q8TDN4	633 aa		12.57	□□□□□ -0.4
NRXN1-231	ENST00000629717	L3MBTL3	Q96JM7	780 aa	Predicted RBP	12.57	□□□□□ -0.4
NRXN1-231	ENST00000629717	TRPC5	Q9UL62	973 aa	Predicted RBP	12.57	□□□□□ -0.4
NRXN1-231	ENST00000629717	CDK12	Q9NYV4	1490 aa	Predicted RBP	12.57	□□□□□ -0.4
NRXN1-231	ENST00000629717	GTPBP6	O43824	516 aa	Predicted RBP	12.56	□□□□□ -0.4
NRXN1-231	ENST00000629717	BCL9L	Q86UU0	1499 aa		12.56	□□□□□ -0.4
NRXN1-231	ENST00000629717	POLR3A	O14802	1390 aa	Predicted RBP	12.56	□□□□□ -0.4
NRXN1-231	ENST00000629717	TRPM1	Q7Z4N2	1603 aa		12.55	□□□□□ -0.4
NRXN1-231	ENST00000629717	STK25	O00506	426 aa		12.55	□□□□□ -0.4
NRXN1-231	ENST00000629717	SOX12	O15370	315 aa		12.55	□□□□□ -0.4
NRXN1-231	ENST00000629717	STK24	Q9Y6E0	443 aa		12.55	□□□□□ -0.4
NRXN1-231	ENST00000629717	ACE	P12821	1306 aa		12.55	□□□□□ -0.4
NRXN1-231	ENST00000629717	UNC5CL	Q8IV45	518 aa		12.54	□□□□□ -0.4
NRXN1-231	ENST00000629717	EVC2	Q86UK5	1308 aa		12.54	□□□□□ -0.4
NRXN1-231	ENST00000629717	ATRN	O75882	1429 aa		12.54	□□□□□ -0.4
NRXN1-231	ENST00000629717	CARD11	Q9BXL7	1154 aa		12.53	□□□□□ -0.4
NRXN1-231	ENST00000629717	SLIT2	O94813	1529 aa		12.52	□□□□□ -0.4
NRXN1-231	ENST00000629717	TRPM3	Q9HCF6	1732 aa	Predicted RBP	12.52	□□□□□ -0.41
NRXN1-231	ENST00000629717	SLAIN1	Q8ND83	568 aa		12.52	□□□□□ -0.41
NRXN1-231	ENST00000629717	PPIP5K1	Q6PFW1	1433 aa		12.52	□□□□□ -0.41
NRXN1-231	ENST00000629717	ITSN1	Q15811	1721 aa		12.51	□□□□□ -0.41
NRXN1-231	ENST00000629717	EP400	Q96L91	3159 aa		12.51	□□□□□ -0.41
NRXN1-231	ENST00000629717	FAM83G	A6ND36	823 aa		12.51	□□□□□ -0.41
NRXN1-231	ENST00000629717	GJD4	Q96KN9	370 aa	Predicted RBP	12.51	□□□□□ -0.41
NRXN1-231	ENST00000629717	CABP1	Q9NZU7	370 aa		12.51	□□□□□ -0.41
NRXN1-231	ENST00000629717	RGS12	O14924	1447 aa		12.51	□□□□□ -0.41
NRXN1-231	ENST00000629717	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	12.5	□□□□□ -0.41
NRXN1-231	ENST00000629717	RALGAPB	Q86X10	1494 aa		12.5	□□□□□ -0.41
NRXN1-231	ENST00000629717	TOPAZ1	Q8N9V7	1692 aa		12.5	□□□□□ -0.41
NRXN1-231	ENST00000629717	ALS2	Q96Q42	1657 aa		12.5	□□□□□ -0.41
NRXN1-231	ENST00000629717	QRICH2	Q9H0J4	1663 aa		12.5	□□□□□ -0.41
NRXN1-231	ENST00000629717	MARF1	Q9Y4F3	1742 aa	Known RBP	12.49	□□□□□ -0.41
NRXN1-231	ENST00000629717	BRD4	O60885	1362 aa	Predicted RBP	12.49	□□□□□ -0.41
NRXN1-231	ENST00000629717	SBNO2	Q9Y2G9	1366 aa		12.49	□□□□□ -0.41
NRXN1-231	ENST00000629717	UPF1	Q92900	1129 aa	Known RBP eCLIP	12.49	□□□□□ -0.41
NRXN1-231	ENST00000629717	PCGF6	Q9BYE7	350 aa		12.49	□□□□□ -0.41
NRXN1-231	ENST00000629717	CLSPN	Q9HAW4	1339 aa		12.48	□□□□□ -0.41
NRXN1-231	ENST00000629717	VPS72	Q15906	364 aa		12.48	□□□□□ -0.41
NRXN1-231	ENST00000629717	NUTM2G	Q5VZR2	741 aa		12.48	□□□□□ -0.41
NRXN1-231	ENST00000629717	ABTB2	Q8N961	1025 aa		12.48	□□□□□ -0.41
NRXN1-231	ENST00000629717	MS4A4A	Q96JQ5	239 aa		12.48	□□□□□ -0.41
NRXN1-231	ENST00000629717	BOLA1	Q9Y3E2	137 aa		12.48	□□□□□ -0.41
NRXN1-231	ENST00000629717	C3orf67	Q6ZVT6	689 aa		12.47	□□□□□ -0.41
NRXN1-231	ENST00000629717	PRDM11	Q9NQV5	511 aa		12.47	□□□□□ -0.41
NRXN1-231	ENST00000629717	BTG4	Q9NY30	223 aa		12.47	□□□□□ -0.41
NRXN1-231	ENST00000629717	ATAD2	Q6PL18	1390 aa		12.46	□□□□□ -0.41
NRXN1-231	ENST00000629717	USP6	P35125	1406 aa		12.45	□□□□□ -0.42
NRXN1-231	ENST00000629717	ABCA3	Q99758	1704 aa		12.45	□□□□□ -0.42
NRXN1-231	ENST00000629717	NLRP13	Q86W25	1043 aa		12.45	□□□□□ -0.42
NRXN1-231	ENST00000629717	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	12.45	□□□□□ -0.42
NRXN1-231	ENST00000629717	KIAA0232	Q92628	1395 aa		12.44	□□□□□ -0.42
NRXN1-231	ENST00000629717	USP19	O94966	1318 aa		12.44	□□□□□ -0.42
NRXN1-231	ENST00000629717	ONECUT3	O60422	494 aa	Predicted RBP	12.44	□□□□□ -0.42
NRXN1-231	ENST00000629717	NLRP6	P59044	892 aa		12.44	□□□□□ -0.42
NRXN1-231	ENST00000629717	ZC3H6	P61129	1189 aa	Known RBP	12.44	□□□□□ -0.42
NRXN1-231	ENST00000629717	FBXO22	Q8NEZ5	403 aa		12.44	□□□□□ -0.42
NRXN1-231	ENST00000629717	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	12.44	□□□□□ -0.42
NRXN1-231	ENST00000629717	MFRP	Q9BY79	579 aa		12.44	□□□□□ -0.42
NRXN1-231	ENST00000629717	CCDC9	Q9Y3X0	531 aa	Known RBP	12.44	□□□□□ -0.42
NRXN1-231	ENST00000629717	SSH2	Q76I76	1423 aa		12.44	□□□□□ -0.42
NRXN1-231	ENST00000629717	NWD2	Q9ULI1	1742 aa		12.43	□□□□□ -0.42

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