RNA–Protein interactions for RNA: ENST00000629387.2

TCF4-268, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 3,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-268ENST00000629387 COPB2P35606 906 aa7.21□□□□□ -1.25
TCF4-268ENST00000629387 CTR9Q6PD62 1173 aa7.21□□□□□ -1.25
TCF4-268ENST00000629387 PRPF38AQ8NAV1 312 aaKnown RBP7.21□□□□□ -1.25
TCF4-268ENST00000629387 CCDC47Q96A33 483 aaKnown RBP7.21□□□□□ -1.25
TCF4-268ENST00000629387 UPF2Q9HAU5 1272 aaKnown RBP7.21□□□□□ -1.25
TCF4-268ENST00000629387 MAP3K20Q9NYL2 800 aaKnown RBP7.21□□□□□ -1.25
TCF4-268ENST00000629387 CEP126Q9P2H0 1117 aa7.21□□□□□ -1.25
TCF4-268ENST00000629387 USP25Q9UHP3 1055 aa7.21□□□□□ -1.25
TCF4-268ENST00000629387 HMMRO75330 724 aa7.21□□□□□ -1.26
TCF4-268ENST00000629387 CADPS2Q86UW7 1296 aa7.21□□□□□ -1.26
TCF4-268ENST00000629387 GPATCH3Q96I76 525 aa7.21□□□□□ -1.26
TCF4-268ENST00000629387 SUFUQ9UMX1 484 aa7.21□□□□□ -1.26
TCF4-268ENST00000629387 SMARCA4P51532 1647 aa7.21□□□□□ -1.26
TCF4-268ENST00000629387 FMNL2Q96PY5 1086 aa7.21□□□□□ -1.26
TCF4-268ENST00000629387 GNL3LQ9NVN8 582 aaKnown RBP7.21□□□□□ -1.26
TCF4-268ENST00000629387 TOP2AP11388 1531 aaKnown RBP7.21□□□□□ -1.26
TCF4-268ENST00000629387 PSMD2Q13200 908 aa7.2□□□□□ -1.26
TCF4-268ENST00000629387 NFKBIBQ15653 356 aa7.2□□□□□ -1.26
TCF4-268ENST00000629387 FBXO41Q8TF61 875 aa7.2□□□□□ -1.26
TCF4-268ENST00000629387 SLC26A8Q96RN1 970 aa7.2□□□□□ -1.26
TCF4-268ENST00000629387 KLF15Q9UIH9 416 aa7.2□□□□□ -1.26
TCF4-268ENST00000629387 U2SURPO15042 1029 aaKnown RBP7.2□□□□□ -1.26
TCF4-268ENST00000629387 CCDC146Q8IYE0 955 aa7.2□□□□□ -1.26
TCF4-268ENST00000629387 UHMK1Q8TAS1 419 aaKnown RBP7.2□□□□□ -1.26
TCF4-268ENST00000629387 RSPH1Q8WYR4 309 aa7.2□□□□□ -1.26
TCF4-268ENST00000629387 CALCOCO1Q9P1Z2 691 aa7.2□□□□□ -1.26
TCF4-268ENST00000629387 CPSF2Q9P2I0 782 aaKnown RBP7.2□□□□□ -1.26
TCF4-268ENST00000629387 KNSTRNQ9Y448 316 aa7.2□□□□□ -1.26
TCF4-268ENST00000629387 KIF16BQ96L93 1317 aa7.2□□□□□ -1.26
TCF4-268ENST00000629387 APLP1P51693 650 aa7.2□□□□□ -1.26
TCF4-268ENST00000629387 ICE2Q659A1 982 aa7.2□□□□□ -1.26
TCF4-268ENST00000629387 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.2□□□□□ -1.26
TCF4-268ENST00000629387 PHC3Q8NDX5 983 aa7.2□□□□□ -1.26
TCF4-268ENST00000629387 SREK1Q8WXA9 508 aaKnown RBP7.2□□□□□ -1.26
TCF4-268ENST00000629387 MRRFQ96E11 262 aaKnown RBP7.2□□□□□ -1.26
TCF4-268ENST00000629387 NEUROD6Q96NK8 337 aa7.2□□□□□ -1.26
TCF4-268ENST00000629387 CEP89Q96ST8 783 aa7.2□□□□□ -1.26
TCF4-268ENST00000629387 RANBP17Q9H2T7 1088 aaKnown RBP7.2□□□□□ -1.26
TCF4-268ENST00000629387 GTPBP6O43824 516 aaPredicted RBP7.19□□□□□ -1.26
TCF4-268ENST00000629387 NBPF7P0C2Y1 421 aaPredicted RBP7.19□□□□□ -1.26
TCF4-268ENST00000629387 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.19□□□□□ -1.26
TCF4-268ENST00000629387 RSPH9Q9H1X1 276 aaPredicted RBP7.19□□□□□ -1.26
TCF4-268ENST00000629387 RSPH14Q9UHP6 348 aa7.19□□□□□ -1.26
TCF4-268ENST00000629387 TNIKQ9UKE5 1360 aa7.19□□□□□ -1.26
TCF4-268ENST00000629387 ZC3H4Q9UPT8 1303 aaKnown RBP7.19□□□□□ -1.26
TCF4-268ENST00000629387 hCG_2014768A0A024R1R8 64 aa7.19□□□□□ -1.26
TCF4-268ENST00000629387 PPFIA3O75145 1194 aa7.19□□□□□ -1.26
TCF4-268ENST00000629387 CHAF1AQ13111 956 aaPredicted RBP7.19□□□□□ -1.26
TCF4-268ENST00000629387 UVSSAQ2YD98 709 aa7.19□□□□□ -1.26
TCF4-268ENST00000629387 SMC5Q8IY18 1101 aa7.19□□□□□ -1.26
TCF4-268ENST00000629387 ZNF396Q96N95 335 aaPredicted RBP7.19□□□□□ -1.26
TCF4-268ENST00000629387 KIF5CO60282 957 aa7.19□□□□□ -1.26
TCF4-268ENST00000629387 TRAK2O60296 914 aa7.19□□□□□ -1.26
TCF4-268ENST00000629387 COQ9O75208 318 aa7.19□□□□□ -1.26
TCF4-268ENST00000629387 CA8P35219 290 aa7.19□□□□□ -1.26
TCF4-268ENST00000629387 FAM184AQ8NB25 1140 aa7.19□□□□□ -1.26
TCF4-268ENST00000629387 FAM117AQ9C073 453 aa7.19□□□□□ -1.26
TCF4-268ENST00000629387 CHIC2Q9UKJ5 165 aa7.19□□□□□ -1.26
TCF4-268ENST00000629387 SHTN1A0MZ66 631 aa7.18□□□□□ -1.26
TCF4-268ENST00000629387 XBP1P17861 261 aa7.18□□□□□ -1.26
TCF4-268ENST00000629387 KIF2CQ99661 725 aa7.18□□□□□ -1.26
TCF4-268ENST00000629387 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.18□□□□□ -1.26
TCF4-268ENST00000629387 RABL2AQ9UBK7 228 aaPredicted RBP7.18□□□□□ -1.26
TCF4-268ENST00000629387 R3HCC1Q9Y3T6 440 aaKnown RBP7.18□□□□□ -1.26
TCF4-268ENST00000629387 CEP164Q9UPV0 1460 aa7.18□□□□□ -1.26
TCF4-268ENST00000629387 CCDC194A0A1B0GVG4 234 aa7.18□□□□□ -1.26
TCF4-268ENST00000629387 EXOC5O00471 708 aa7.18□□□□□ -1.26
TCF4-268ENST00000629387 GYS2P54840 703 aa7.18□□□□□ -1.26
TCF4-268ENST00000629387 MAMSTRQ6ZN01 415 aa7.18□□□□□ -1.26
TCF4-268ENST00000629387 NRBP1Q9UHY1 535 aa7.18□□□□□ -1.26
TCF4-268ENST00000629387 PAF1Q8N7H5 531 aa7.18□□□□□ -1.26
TCF4-268ENST00000629387 TAF4BQ92750 862 aa7.18□□□□□ -1.26
TCF4-268ENST00000629387 DEF6Q9H4E7 631 aa7.18□□□□□ -1.26
TCF4-268ENST00000629387 ZNF219Q9P2Y4 722 aaPredicted RBP7.18□□□□□ -1.26
TCF4-268ENST00000629387 SYNPO2Q9UMS6 1093 aa7.18□□□□□ -1.26
TCF4-268ENST00000629387 ENOX2Q16206 610 aaKnown RBP7.17□□□□□ -1.26
TCF4-268ENST00000629387 KLHL23Q8NBE8 558 aa7.17□□□□□ -1.26
TCF4-268ENST00000629387 IRF2BPLQ9H1B7 796 aa7.17□□□□□ -1.26
TCF4-268ENST00000629387 MTUS2Q5JR59 1369 aa7.17□□□□□ -1.26
TCF4-268ENST00000629387 RRM1P23921 792 aa7.17□□□□□ -1.26
TCF4-268ENST00000629387 PSMC1P62191 440 aaKnown RBP7.17□□□□□ -1.26
TCF4-268ENST00000629387 DUSP27Q5VZP5 1158 aa7.17□□□□□ -1.26
TCF4-268ENST00000629387 PAGR1Q9BTK6 254 aa7.17□□□□□ -1.26
TCF4-268ENST00000629387 CHMP3Q9Y3E7 222 aa7.17□□□□□ -1.26
TCF4-268ENST00000629387 CCDC92Q53HC0 331 aaPredicted RBP7.17□□□□□ -1.26
TCF4-268ENST00000629387 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.17□□□□□ -1.26
TCF4-268ENST00000629387 UQCRHLA0A096LP55 91 aa7.16□□□□□ -1.26
TCF4-268ENST00000629387 KIF3CO14782 793 aa7.16□□□□□ -1.26
TCF4-268ENST00000629387 OATP04181 439 aa7.16□□□□□ -1.26
TCF4-268ENST00000629387 UQCRHP07919 91 aa7.16□□□□□ -1.26
TCF4-268ENST00000629387 MPHOSPH6Q99547 160 aaKnown RBP7.16□□□□□ -1.26
TCF4-268ENST00000629387 ITM2BQ9Y287 266 aa7.16□□□□□ -1.26
TCF4-268ENST00000629387 FAM200BP0CF97 657 aa7.16□□□□□ -1.26
TCF4-268ENST00000629387 MCCD1P59942 119 aaPredicted RBP7.16□□□□□ -1.26
TCF4-268ENST00000629387 MORC1Q86VD1 984 aa7.16□□□□□ -1.26
TCF4-268ENST00000629387 TNPO1Q92973 898 aaKnown RBP7.16□□□□□ -1.26
TCF4-268ENST00000629387 TRIM11Q96F44 468 aa7.16□□□□□ -1.26
TCF4-268ENST00000629387 KIAA1522Q9P206 1035 aaPredicted RBP7.16□□□□□ -1.26
TCF4-268ENST00000629387 CARMIL1Q5VZK9 1371 aa7.16□□□□□ -1.26
TCF4-268ENST00000629387 KLHL33A6NCF5 533 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms