RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 CC2D1AQ6P1N0 951 aaPredicted RBP4.71□□□□□ -1.66
R3HDM1-220ENST00000628915 TMC1Q8TDI8 760 aa4.71□□□□□ -1.66
R3HDM1-220ENST00000628915 CEP89Q96ST8 783 aa4.71□□□□□ -1.66
R3HDM1-220ENST00000628915 NUDCQ9Y266 331 aa4.71□□□□□ -1.66
R3HDM1-220ENST00000628915 SUGT1Q9Y2Z0 365 aa4.71□□□□□ -1.66
R3HDM1-220ENST00000628915 KNSTRNQ9Y448 316 aa4.71□□□□□ -1.66
R3HDM1-220ENST00000628915 NME8Q8N427 588 aa4.7□□□□□ -1.66
R3HDM1-220ENST00000628915 DEF6Q9H4E7 631 aa4.7□□□□□ -1.66
R3HDM1-220ENST00000628915 RRBP1Q9P2E9 1410 aaKnown RBP4.7□□□□□ -1.66
R3HDM1-220ENST00000628915 SMAPO00193 183 aa4.7□□□□□ -1.66
R3HDM1-220ENST00000628915 DDX46Q7L014 1031 aaKnown RBP4.7□□□□□ -1.66
R3HDM1-220ENST00000628915 TAX1BP1Q86VP1 789 aa4.7□□□□□ -1.66
R3HDM1-220ENST00000628915 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.7□□□□□ -1.66
R3HDM1-220ENST00000628915 KDM4CQ9H3R0 1056 aa4.7□□□□□ -1.66
R3HDM1-220ENST00000628915 KIAA0556O60303 1618 aa4.7□□□□□ -1.66
R3HDM1-220ENST00000628915 EVI5LQ96CN4 794 aa4.7□□□□□ -1.66
R3HDM1-220ENST00000628915 RMI1Q9H9A7 625 aa4.7□□□□□ -1.66
R3HDM1-220ENST00000628915 EFCC1Q9HA90 598 aa4.7□□□□□ -1.66
R3HDM1-220ENST00000628915 ZMYM4Q5VZL5 1548 aa4.7□□□□□ -1.66
R3HDM1-220ENST00000628915 U2AF1L5P0DN76 240 aaPredicted RBP4.7□□□□□ -1.66
R3HDM1-220ENST00000628915 MSNP26038 577 aaKnown RBP4.7□□□□□ -1.66
R3HDM1-220ENST00000628915 VASPP50552 380 aaPredicted RBP4.7□□□□□ -1.66
R3HDM1-220ENST00000628915 U2AF1Q01081 240 aaKnown RBP eCLIP4.7□□□□□ -1.66
R3HDM1-220ENST00000628915 KIAA1211Q6ZU35 1233 aa4.7□□□□□ -1.66
R3HDM1-220ENST00000628915 CWC15Q9P013 229 aaKnown RBP4.7□□□□□ -1.66
R3HDM1-220ENST00000628915 CALCOCO1Q9P1Z2 691 aa4.7□□□□□ -1.66
R3HDM1-220ENST00000628915 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.7□□□□□ -1.66
R3HDM1-220ENST00000628915 ABCA9Q8IUA7 1624 aa4.7□□□□□ -1.66
R3HDM1-220ENST00000628915 DYTNA2CJ06 578 aa4.69□□□□□ -1.66
R3HDM1-220ENST00000628915 NPHP1O15259 732 aa4.69□□□□□ -1.66
R3HDM1-220ENST00000628915 LMNB1P20700 586 aa4.69□□□□□ -1.66
R3HDM1-220ENST00000628915 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.69□□□□□ -1.66
R3HDM1-220ENST00000628915 ZNF662Q6ZS27 426 aa4.69□□□□□ -1.66
R3HDM1-220ENST00000628915 UBA5Q9GZZ9 404 aa4.69□□□□□ -1.66
R3HDM1-220ENST00000628915 EFCAB5A4FU69 1503 aa4.69□□□□□ -1.66
R3HDM1-220ENST00000628915 FRAT2O75474 233 aaPredicted RBP4.69□□□□□ -1.66
R3HDM1-220ENST00000628915 DRC1Q96MC2 740 aa4.69□□□□□ -1.66
R3HDM1-220ENST00000628915 CPSF2Q9P2I0 782 aaKnown RBP4.69□□□□□ -1.66
R3HDM1-220ENST00000628915 G3BP2Q9UN86 482 aaKnown RBP4.69□□□□□ -1.66
R3HDM1-220ENST00000628915 DDX49Q9Y6V7 483 aaKnown RBP4.69□□□□□ -1.66
R3HDM1-220ENST00000628915 KIF5CO60282 957 aa4.69□□□□□ -1.66
R3HDM1-220ENST00000628915 TRIM29Q14134 588 aa4.69□□□□□ -1.66
R3HDM1-220ENST00000628915 hCG_2014768A0A024R1R8 64 aa4.68□□□□□ -1.66
R3HDM1-220ENST00000628915 INF2Q27J81 1249 aa4.68□□□□□ -1.66
R3HDM1-220ENST00000628915 C16orf87Q6PH81 154 aa4.68□□□□□ -1.66
R3HDM1-220ENST00000628915 NCAPGQ9BPX3 1015 aa4.68□□□□□ -1.66
R3HDM1-220ENST00000628915 MRS2Q9HD23 443 aa4.68□□□□□ -1.66
R3HDM1-220ENST00000628915 IRAK4Q9NWZ3 460 aa4.68□□□□□ -1.66
R3HDM1-220ENST00000628915 SDR16C5Q8N3Y7 309 aa4.68□□□□□ -1.66
R3HDM1-220ENST00000628915 ARHGEF1Q92888 912 aaKnown RBP4.68□□□□□ -1.66
R3HDM1-220ENST00000628915 ITFG2Q969R8 447 aa4.68□□□□□ -1.66
R3HDM1-220ENST00000628915 CCNB3Q8WWL7 1395 aa4.68□□□□□ -1.66
R3HDM1-220ENST00000628915 IQGAP2Q13576 1575 aa4.68□□□□□ -1.66
R3HDM1-220ENST00000628915 ESPNB1AK53 854 aa4.68□□□□□ -1.66
R3HDM1-220ENST00000628915 KIF1CO43896 1103 aaKnown RBP4.68□□□□□ -1.66
R3HDM1-220ENST00000628915 NBPF7P0C2Y1 421 aaPredicted RBP4.68□□□□□ -1.66
R3HDM1-220ENST00000628915 ABCD1P33897 745 aa4.68□□□□□ -1.66
R3HDM1-220ENST00000628915 PUS10Q3MIT2 529 aaKnown RBP4.68□□□□□ -1.66
R3HDM1-220ENST00000628915 KCNV2Q8TDN2 545 aa4.68□□□□□ -1.66
R3HDM1-220ENST00000628915 NAP1L4Q99733 375 aaKnown RBP4.68□□□□□ -1.66
R3HDM1-220ENST00000628915 ZRANB1Q9UGI0 708 aa4.68□□□□□ -1.66
R3HDM1-220ENST00000628915 PUF60Q9UHX1 559 aaKnown RBP4.68□□□□□ -1.66
R3HDM1-220ENST00000628915 COMMD10Q9Y6G5 202 aa4.68□□□□□ -1.66
R3HDM1-220ENST00000628915 PDE6BP35913 854 aa4.68□□□□□ -1.66
R3HDM1-220ENST00000628915 BECN1Q14457 450 aa4.68□□□□□ -1.66
R3HDM1-220ENST00000628915 PPP2R5AQ15172 486 aa4.68□□□□□ -1.66
R3HDM1-220ENST00000628915 LCA5Q86VQ0 697 aa4.68□□□□□ -1.66
R3HDM1-220ENST00000628915 SIN3AQ96ST3 1273 aa4.68□□□□□ -1.66
R3HDM1-220ENST00000628915 TOMM22Q9NS69 142 aa4.68□□□□□ -1.66
R3HDM1-220ENST00000628915 CHCHD3Q9NX63 227 aaKnown RBP4.68□□□□□ -1.66
R3HDM1-220ENST00000628915 RAB3GAP2Q9H2M9 1393 aa4.67□□□□□ -1.66
R3HDM1-220ENST00000628915 CTAGE5O15320 804 aa4.67□□□□□ -1.66
R3HDM1-220ENST00000628915 MRE11P49959 708 aa4.67□□□□□ -1.66
R3HDM1-220ENST00000628915 ENOX2Q16206 610 aaKnown RBP4.67□□□□□ -1.66
R3HDM1-220ENST00000628915 TTC30BQ8N4P2 665 aa4.67□□□□□ -1.66
R3HDM1-220ENST00000628915 ERCC4Q92889 916 aaPredicted RBP4.67□□□□□ -1.66
R3HDM1-220ENST00000628915 CCDC47Q96A33 483 aaKnown RBP4.67□□□□□ -1.66
R3HDM1-220ENST00000628915 USP25Q9UHP3 1055 aa4.67□□□□□ -1.66
R3HDM1-220ENST00000628915 SOGA1O94964 1423 aa4.67□□□□□ -1.66
R3HDM1-220ENST00000628915 ABCC2Q92887 1545 aa4.67□□□□□ -1.66
R3HDM1-220ENST00000628915 COPB2P35606 906 aa4.67□□□□□ -1.66
R3HDM1-220ENST00000628915 USP5P45974 858 aa4.67□□□□□ -1.66
R3HDM1-220ENST00000628915 IRX5P78411 483 aaPredicted RBP4.67□□□□□ -1.66
R3HDM1-220ENST00000628915 SLC26A8Q96RN1 970 aa4.67□□□□□ -1.66
R3HDM1-220ENST00000628915 NOL10Q9BSC4 688 aaKnown RBP4.67□□□□□ -1.66
R3HDM1-220ENST00000628915 TONSLQ96HA7 1378 aa4.67□□□□□ -1.66
R3HDM1-220ENST00000628915 SETD5Q9C0A6 1442 aa4.67□□□□□ -1.66
R3HDM1-220ENST00000628915 IBSPP21815 317 aaPredicted RBP4.67□□□□□ -1.66
R3HDM1-220ENST00000628915 MECOMQ03112 1051 aa4.67□□□□□ -1.66
R3HDM1-220ENST00000628915 IRF5Q13568 498 aa4.67□□□□□ -1.66
R3HDM1-220ENST00000628915 FAM161AQ3B820 660 aa4.67□□□□□ -1.66
R3HDM1-220ENST00000628915 ANKRD23Q86SG2 305 aa4.67□□□□□ -1.66
R3HDM1-220ENST00000628915 DZIP1Q86YF9 867 aaKnown RBP4.67□□□□□ -1.66
R3HDM1-220ENST00000628915 CCAR1Q8IX12 1150 aaKnown RBP4.67□□□□□ -1.66
R3HDM1-220ENST00000628915 ZHX3Q9H4I2 956 aa4.67□□□□□ -1.66
R3HDM1-220ENST00000628915 FBXO9Q9UK97 447 aaPredicted RBP4.67□□□□□ -1.66
R3HDM1-220ENST00000628915 IQSEC3Q9UPP2 1182 aaPredicted RBP4.67□□□□□ -1.66
R3HDM1-220ENST00000628915 MROH2AA6NES4 1674 aa4.67□□□□□ -1.66
R3HDM1-220ENST00000628915 PPFIA3O75145 1194 aa4.66□□□□□ -1.66
R3HDM1-220ENST00000628915 ATICP31939 592 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms