RNA–Protein interactions for RNA: ENST00000628906.2

LINC00649-220, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 625 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-220ENST00000628906 AKT1S1Q96B36 256 aa9.51□□□□□ -0.89
LINC00649-220ENST00000628906 CD2APQ9Y5K6 639 aa9.51□□□□□ -0.89
LINC00649-220ENST00000628906 ALS2Q96Q42 1657 aa9.51□□□□□ -0.89
LINC00649-220ENST00000628906 RGPD8O14715 1765 aaPredicted RBP9.5□□□□□ -0.89
LINC00649-220ENST00000628906 PAPPAQ13219 1627 aa9.5□□□□□ -0.89
LINC00649-220ENST00000628906 CRYBG1Q9Y4K1 1723 aa9.5□□□□□ -0.89
LINC00649-220ENST00000628906 ABCC11Q96J66 1382 aa9.5□□□□□ -0.89
LINC00649-220ENST00000628906 PLEKHH1Q9ULM0 1364 aa9.5□□□□□ -0.89
LINC00649-220ENST00000628906 PHRF1Q9P1Y6 1649 aaKnown RBP9.49□□□□□ -0.89
LINC00649-220ENST00000628906 TRPM3Q9HCF6 1732 aaPredicted RBP9.49□□□□□ -0.89
LINC00649-220ENST00000628906 ZC3H6P61129 1189 aaKnown RBP9.49□□□□□ -0.89
LINC00649-220ENST00000628906 C16orf71Q8IYS4 520 aaPredicted RBP9.49□□□□□ -0.89
LINC00649-220ENST00000628906 PNPLA7Q6ZV29 1317 aa9.49□□□□□ -0.89
LINC00649-220ENST00000628906 FOXN1O15353 648 aa9.48□□□□□ -0.89
LINC00649-220ENST00000628906 SIRT1Q96EB6 747 aa9.48□□□□□ -0.89
LINC00649-220ENST00000628906 LRRC4BQ9NT99 713 aa9.48□□□□□ -0.89
LINC00649-220ENST00000628906 STK26Q9P289 416 aa9.48□□□□□ -0.89
LINC00649-220ENST00000628906 GPRASP1Q5JY77 1395 aa9.48□□□□□ -0.89
LINC00649-220ENST00000628906 TOPAZ1Q8N9V7 1692 aa9.47□□□□□ -0.89
LINC00649-220ENST00000628906 ACIN1Q9UKV3 1341 aaKnown RBP9.47□□□□□ -0.89
LINC00649-220ENST00000628906 KANK4Q5T7N3 995 aaPredicted RBP9.46□□□□□ -0.9
LINC00649-220ENST00000628906 RPGRIP1LQ68CZ1 1315 aa9.46□□□□□ -0.9
LINC00649-220ENST00000628906 BRD4O60885 1362 aaPredicted RBP9.46□□□□□ -0.9
LINC00649-220ENST00000628906 CLTCL1P53675 1640 aa9.45□□□□□ -0.9
LINC00649-220ENST00000628906 QSER1Q2KHR3 1735 aa9.45□□□□□ -0.9
LINC00649-220ENST00000628906 CTCFP49711 727 aaPredicted RBP9.44□□□□□ -0.9
LINC00649-220ENST00000628906 SMC1BQ8NDV3 1235 aa9.44□□□□□ -0.9
LINC00649-220ENST00000628906 CRB1P82279 1406 aa9.44□□□□□ -0.9
LINC00649-220ENST00000628906 C10orf71Q711Q0 1435 aa9.43□□□□□ -0.9
LINC00649-220ENST00000628906 CPDO75976 1380 aa9.43□□□□□ -0.9
LINC00649-220ENST00000628906 ANKRD30BQ9BXX2 1392 aa9.43□□□□□ -0.9
LINC00649-220ENST00000628906 PAK3O75914 559 aaPredicted RBP9.43□□□□□ -0.9
LINC00649-220ENST00000628906 LRRC37A3O60309 1634 aa9.42□□□□□ -0.9
LINC00649-220ENST00000628906 ANKARQ7Z5J8 1434 aa9.42□□□□□ -0.9
LINC00649-220ENST00000628906 NUP155O75694 1391 aa9.42□□□□□ -0.9
LINC00649-220ENST00000628906 CCDC85CA6NKD9 419 aa9.42□□□□□ -0.9
LINC00649-220ENST00000628906 CDCA7Q9BWT1 371 aaPredicted RBP9.42□□□□□ -0.9
LINC00649-220ENST00000628906 TFCP2L1Q9NZI6 479 aa9.42□□□□□ -0.9
LINC00649-220ENST00000628906 LMO7Q8WWI1 1683 aa9.42□□□□□ -0.9
LINC00649-220ENST00000628906 IGSF1Q8N6C5 1336 aa9.41□□□□□ -0.9
LINC00649-220ENST00000628906 SLC27A3Q5K4L6 730 aa9.41□□□□□ -0.9
LINC00649-220ENST00000628906 COL5A2P05997 1499 aaPredicted RBP9.4□□□□□ -0.9
LINC00649-220ENST00000628906 TMEM132EQ6IEE7 984 aa9.4□□□□□ -0.9
LINC00649-220ENST00000628906 CICQ96RK0 1608 aaPredicted RBP9.4□□□□□ -0.9
LINC00649-220ENST00000628906 IFT172Q9UG01 1749 aa9.39□□□□□ -0.91
LINC00649-220ENST00000628906 EXOC5O00471 708 aa9.39□□□□□ -0.91
LINC00649-220ENST00000628906 LBX1P52954 281 aa9.39□□□□□ -0.91
LINC00649-220ENST00000628906 HIRIP3Q9BW71 556 aaPredicted RBP9.39□□□□□ -0.91
LINC00649-220ENST00000628906 RRAGCQ9HB90 399 aa9.39□□□□□ -0.91
LINC00649-220ENST00000628906 PXDNLA1KZ92 1463 aa9.39□□□□□ -0.91
LINC00649-220ENST00000628906 COL23A1Q86Y22 540 aaPredicted RBP9.38□□□□□ -0.91
LINC00649-220ENST00000628906 KDM2BQ8NHM5 1336 aa9.37□□□□□ -0.91
LINC00649-220ENST00000628906 NGDNQ8NEJ9 315 aaKnown RBP9.37□□□□□ -0.91
LINC00649-220ENST00000628906 SLC4A1APQ9BWU0 796 aaKnown RBP9.37□□□□□ -0.91
LINC00649-220ENST00000628906 WBP1LQ9NX94 342 aa9.37□□□□□ -0.91
LINC00649-220ENST00000628906 KNDC1Q76NI1 1749 aa9.36□□□□□ -0.91
LINC00649-220ENST00000628906 NUTM2GQ5VZR2 741 aa9.36□□□□□ -0.91
LINC00649-220ENST00000628906 AIDAQ96BJ3 306 aa9.36□□□□□ -0.91
LINC00649-220ENST00000628906 ACSBG1Q96GR2 724 aa9.36□□□□□ -0.91
LINC00649-220ENST00000628906 AKAP12Q02952 1782 aa9.36□□□□□ -0.91
LINC00649-220ENST00000628906 USP6P35125 1406 aa9.36□□□□□ -0.91
LINC00649-220ENST00000628906 YTHDC2Q9H6S0 1430 aaKnown RBP9.36□□□□□ -0.91
LINC00649-220ENST00000628906 KIF1BO60333 1816 aa9.35□□□□□ -0.91
LINC00649-220ENST00000628906 ADGRF5Q8IZF2 1346 aa9.35□□□□□ -0.91
LINC00649-220ENST00000628906 PRR36Q9H6K5 1346 aa9.35□□□□□ -0.91
LINC00649-220ENST00000628906 PRPF38BQ5VTL8 546 aaKnown RBP9.35□□□□□ -0.91
LINC00649-220ENST00000628906 MSL1Q68DK7 614 aa9.35□□□□□ -0.91
LINC00649-220ENST00000628906 TOM1L2Q6ZVM7 507 aa9.35□□□□□ -0.91
LINC00649-220ENST00000628906 VPS8Q8N3P4 1428 aa9.35□□□□□ -0.91
LINC00649-220ENST00000628906 NHSQ6T4R5 1651 aa9.35□□□□□ -0.91
LINC00649-220ENST00000628906 PLEKHG2Q9H7P9 1386 aa9.35□□□□□ -0.91
LINC00649-220ENST00000628906 A0A0C4DFX4 3053 aa9.35□□□□□ -0.91
LINC00649-220ENST00000628906 GCP02774 474 aa9.34□□□□□ -0.91
LINC00649-220ENST00000628906 CREBZFQ9NS37 354 aa9.34□□□□□ -0.91
LINC00649-220ENST00000628906 MKRN1Q9UHC7 482 aaKnown RBP9.34□□□□□ -0.91
LINC00649-220ENST00000628906 TUBGCP6Q96RT7 1819 aa9.33□□□□□ -0.92
LINC00649-220ENST00000628906 KCPQ6ZWJ8 1503 aa9.33□□□□□ -0.92
LINC00649-220ENST00000628906 HSPA8P11142 646 aaKnown RBP9.33□□□□□ -0.92
LINC00649-220ENST00000628906 C9orf131Q5VYM1 1079 aa9.33□□□□□ -0.92
LINC00649-220ENST00000628906 ARHGAP27Q6ZUM4 889 aa9.33□□□□□ -0.92
LINC00649-220ENST00000628906 CUL9Q8IWT3 2517 aa9.32□□□□□ -0.92
LINC00649-220ENST00000628906 PRAM1Q96QH2 718 aa9.32□□□□□ -0.92
LINC00649-220ENST00000628906 PPLO60437 1756 aa9.32□□□□□ -0.92
LINC00649-220ENST00000628906 WDR17Q8IZU2 1322 aa9.31□□□□□ -0.92
LINC00649-220ENST00000628906 BTAF1O14981 1849 aa9.31□□□□□ -0.92
LINC00649-220ENST00000628906 KCNQ4P56696 695 aa9.31□□□□□ -0.92
LINC00649-220ENST00000628906 SAFB2Q14151 953 aaKnown RBP eCLIP9.31□□□□□ -0.92
LINC00649-220ENST00000628906 CARD10Q9BWT7 1032 aa9.31□□□□□ -0.92
LINC00649-220ENST00000628906 CNTNAP1P78357 1384 aa9.3□□□□□ -0.92
LINC00649-220ENST00000628906 VEGFAP15692 232 aaPredicted RBP9.3□□□□□ -0.92
LINC00649-220ENST00000628906 EIF3AQ14152 1382 aaKnown RBP9.29□□□□□ -0.92
LINC00649-220ENST00000628906 ABTB2Q8N961 1025 aa9.29□□□□□ -0.92
LINC00649-220ENST00000628906 FLAD1Q8NFF5 587 aa9.29□□□□□ -0.92
LINC00649-220ENST00000628906 BCS1LQ9Y276 419 aa9.29□□□□□ -0.92
LINC00649-220ENST00000628906 AXIN2Q9Y2T1 843 aa9.29□□□□□ -0.92
LINC00649-220ENST00000628906 TRPM1Q7Z4N2 1603 aa9.29□□□□□ -0.92
LINC00649-220ENST00000628906 KAT6BQ8WYB5 2073 aa9.28□□□□□ -0.92
LINC00649-220ENST00000628906 VEGFBP49765 207 aa9.28□□□□□ -0.92
LINC00649-220ENST00000628906 NLRP13Q86W25 1043 aa9.28□□□□□ -0.92
LINC00649-220ENST00000628906 TNRC6CQ9HCJ0 1690 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms