RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 NHSL1Q5SYE7 1610 aa13.39□□□□□ -0.27
FOXCUT-201ENST00000628509 FCHSD2O94868 740 aa13.39□□□□□ -0.27
FOXCUT-201ENST00000628509 GCP02774 474 aa13.39□□□□□ -0.27
FOXCUT-201ENST00000628509 RUNDC1Q96C34 613 aa13.39□□□□□ -0.27
FOXCUT-201ENST00000628509 ADAMTS8Q9UP79 889 aa13.39□□□□□ -0.27
FOXCUT-201ENST00000628509 SLIT3O75094 1523 aa13.39□□□□□ -0.27
FOXCUT-201ENST00000628509 XPCQ01831 940 aaPredicted RBP13.38□□□□□ -0.27
FOXCUT-201ENST00000628509 RRS1Q15050 365 aaKnown RBP13.38□□□□□ -0.27
FOXCUT-201ENST00000628509 ZRANB1Q9UGI0 708 aa13.38□□□□□ -0.27
FOXCUT-201ENST00000628509 ABCC6O95255 1503 aa13.38□□□□□ -0.27
FOXCUT-201ENST00000628509 MAP3K19Q56UN5 1328 aa13.38□□□□□ -0.27
FOXCUT-201ENST00000628509 MED1Q15648 1581 aaPredicted RBP13.37□□□□□ -0.27
FOXCUT-201ENST00000628509 SOX12O15370 315 aa13.37□□□□□ -0.27
FOXCUT-201ENST00000628509 NUTM2GQ5VZR2 741 aa13.37□□□□□ -0.27
FOXCUT-201ENST00000628509 EMILIN1Q9Y6C2 1016 aa13.37□□□□□ -0.27
FOXCUT-201ENST00000628509 AHDC1Q5TGY3 1603 aaPredicted RBP13.37□□□□□ -0.27
FOXCUT-201ENST00000628509 PHRF1Q9P1Y6 1649 aaKnown RBP13.36□□□□□ -0.27
FOXCUT-201ENST00000628509 IP6K1Q92551 441 aa13.36□□□□□ -0.27
FOXCUT-201ENST00000628509 ROBO1Q9Y6N7 1651 aa13.36□□□□□ -0.27
FOXCUT-201ENST00000628509 UBAP1LF5GYI3 381 aa13.35□□□□□ -0.27
FOXCUT-201ENST00000628509 LMOD3Q0VAK6 560 aa13.35□□□□□ -0.27
FOXCUT-201ENST00000628509 COL3A1P02461 1466 aaPredicted RBP13.35□□□□□ -0.27
FOXCUT-201ENST00000628509 LTN1O94822 1766 aa13.35□□□□□ -0.27
FOXCUT-201ENST00000628509 SHPRHQ149N8 1683 aa13.34□□□□□ -0.27
FOXCUT-201ENST00000628509 HOXC9P31274 260 aa13.34□□□□□ -0.27
FOXCUT-201ENST00000628509 CALD1Q05682 793 aaKnown RBP13.34□□□□□ -0.27
FOXCUT-201ENST00000628509 CERKQ8TCT0 537 aa13.34□□□□□ -0.27
FOXCUT-201ENST00000628509 NFAT5O94916 1531 aa13.34□□□□□ -0.27
FOXCUT-201ENST00000628509 CPDO75976 1380 aa13.33□□□□□ -0.27
FOXCUT-201ENST00000628509 IL13P35225 146 aa13.33□□□□□ -0.28
FOXCUT-201ENST00000628509 ARHGEF25Q86VW2 580 aa13.33□□□□□ -0.28
FOXCUT-201ENST00000628509 MARF1Q9Y4F3 1742 aaKnown RBP13.33□□□□□ -0.28
FOXCUT-201ENST00000628509 ZBTB7CA1YPR0 619 aa13.31□□□□□ -0.28
FOXCUT-201ENST00000628509 EIF4A2Q14240 407 aaKnown RBP13.31□□□□□ -0.28
FOXCUT-201ENST00000628509 CCDC27Q2M243 656 aa13.31□□□□□ -0.28
FOXCUT-201ENST00000628509 PHLPP1O60346 1717 aa13.3□□□□□ -0.28
FOXCUT-201ENST00000628509 HSP90AB2PQ58FF8 381 aa13.3□□□□□ -0.28
FOXCUT-201ENST00000628509 PRDM11Q9NQV5 511 aa13.3□□□□□ -0.28
FOXCUT-201ENST00000628509 FAM208AQ9UK61 1670 aaKnown RBP13.3□□□□□ -0.28
FOXCUT-201ENST00000628509 PLEKHG2Q9H7P9 1386 aa13.3□□□□□ -0.28
FOXCUT-201ENST00000628509 APAF1O14727 1248 aa13.29□□□□□ -0.28
FOXCUT-201ENST00000628509 PIP4K2BP78356 416 aa13.29□□□□□ -0.28
FOXCUT-201ENST00000628509 TCP11L2Q8N4U5 519 aa13.29□□□□□ -0.28
FOXCUT-201ENST00000628509 DDX17Q92841 729 aaKnown RBP13.29□□□□□ -0.28
FOXCUT-201ENST00000628509 PRKAR2BP31323 418 aa13.28□□□□□ -0.28
FOXCUT-201ENST00000628509 GOLGA2Q08379 1002 aa13.28□□□□□ -0.28
FOXCUT-201ENST00000628509 CCDC146Q8IYE0 955 aa13.28□□□□□ -0.28
FOXCUT-201ENST00000628509 GAS2L2Q8NHY3 880 aa13.28□□□□□ -0.28
FOXCUT-201ENST00000628509 PEAK1Q9H792 1746 aa13.27□□□□□ -0.28
FOXCUT-201ENST00000628509 CSB-PGBD3P0DP91 1061 aa13.27□□□□□ -0.29
FOXCUT-201ENST00000628509 FBLN1P23142 703 aa13.27□□□□□ -0.29
FOXCUT-201ENST00000628509 ZC3H6P61129 1189 aaKnown RBP13.27□□□□□ -0.29
FOXCUT-201ENST00000628509 SULT6B1Q6IMI4 303 aa13.27□□□□□ -0.29
FOXCUT-201ENST00000628509 WDR63Q8IWG1 891 aa13.27□□□□□ -0.29
FOXCUT-201ENST00000628509 RSPH6AQ9H0K4 717 aa13.27□□□□□ -0.29
FOXCUT-201ENST00000628509 IGSF1Q8N6C5 1336 aa13.27□□□□□ -0.29
FOXCUT-201ENST00000628509 COL22A1Q8NFW1 1626 aaPredicted RBP13.27□□□□□ -0.29
FOXCUT-201ENST00000628509 MYCNP04198 464 aaPredicted RBP13.26□□□□□ -0.29
FOXCUT-201ENST00000628509 RBM42Q9BTD8 480 aaKnown RBP13.26□□□□□ -0.29
FOXCUT-201ENST00000628509 CRYBG1Q9Y4K1 1723 aa13.25□□□□□ -0.29
FOXCUT-201ENST00000628509 KDRP35968 1356 aa13.25□□□□□ -0.29
FOXCUT-201ENST00000628509 E9PSI1 815 aa13.25□□□□□ -0.29
FOXCUT-201ENST00000628509 PLEKHG5O94827 1062 aa13.25□□□□□ -0.29
FOXCUT-201ENST00000628509 HMOX1P09601 288 aa13.25□□□□□ -0.29
FOXCUT-201ENST00000628509 EVA1CP58658 441 aa13.25□□□□□ -0.29
FOXCUT-201ENST00000628509 NFE2L2Q16236 605 aa13.25□□□□□ -0.29
FOXCUT-201ENST00000628509 AMOTQ4VCS5 1084 aa13.25□□□□□ -0.29
FOXCUT-201ENST00000628509 ANKRD24Q8TF21 1146 aa13.25□□□□□ -0.29
FOXCUT-201ENST00000628509 LTV1Q96GA3 475 aaPredicted RBP13.25□□□□□ -0.29
FOXCUT-201ENST00000628509 PLEKHF1Q96S99 279 aa13.25□□□□□ -0.29
FOXCUT-201ENST00000628509 MYH16Q9H6N6 1097 aa13.25□□□□□ -0.29
FOXCUT-201ENST00000628509 RGPD1P0DJD0 1748 aa13.25□□□□□ -0.29
FOXCUT-201ENST00000628509 KIAA0232Q92628 1395 aa13.24□□□□□ -0.29
FOXCUT-201ENST00000628509 JCADQ9P266 1359 aa13.24□□□□□ -0.29
FOXCUT-201ENST00000628509 ERBB3P21860 1342 aa13.24□□□□□ -0.29
FOXCUT-201ENST00000628509 TMPOP42166 694 aaKnown RBP13.24□□□□□ -0.29
FOXCUT-201ENST00000628509 RIPK4P57078 832 aa13.24□□□□□ -0.29
FOXCUT-201ENST00000628509 RTF1Q92541 710 aaKnown RBP13.24□□□□□ -0.29
FOXCUT-201ENST00000628509 EYA1Q99502 592 aa13.24□□□□□ -0.29
FOXCUT-201ENST00000628509 IL16Q14005 1332 aa13.23□□□□□ -0.29
FOXCUT-201ENST00000628509 HTATSF1O43719 755 aaKnown RBP13.23□□□□□ -0.29
FOXCUT-201ENST00000628509 NEFLP07196 543 aa13.23□□□□□ -0.29
FOXCUT-201ENST00000628509 PLEKHO1Q53GL0 409 aaPredicted RBP13.23□□□□□ -0.29
FOXCUT-201ENST00000628509 RAPGEF4Q8WZA2 1011 aa13.23□□□□□ -0.29
FOXCUT-201ENST00000628509 SALL2Q9Y467 1007 aaPredicted RBP13.23□□□□□ -0.29
FOXCUT-201ENST00000628509 COL16A1Q07092 1604 aaPredicted RBP13.23□□□□□ -0.29
FOXCUT-201ENST00000628509 ABCA3Q99758 1704 aa13.22□□□□□ -0.29
FOXCUT-201ENST00000628509 SPATA31A6Q5VVP1 1343 aa13.22□□□□□ -0.29
FOXCUT-201ENST00000628509 NEUROD2Q15784 382 aa13.22□□□□□ -0.29
FOXCUT-201ENST00000628509 WWC1Q8IX03 1113 aa13.22□□□□□ -0.29
FOXCUT-201ENST00000628509 CABLES1Q8TDN4 633 aa13.22□□□□□ -0.29
FOXCUT-201ENST00000628509 COL14A1Q05707 1796 aaKnown RBP13.22□□□□□ -0.29
FOXCUT-201ENST00000628509 NLRP2Q9NX02 1062 aa13.21□□□□□ -0.29
FOXCUT-201ENST00000628509 TATP17735 454 aaPredicted RBP13.2□□□□□ -0.3
FOXCUT-201ENST00000628509 WDR17Q8IZU2 1322 aa13.19□□□□□ -0.3
FOXCUT-201ENST00000628509 CT47B1P0C2W7 299 aaPredicted RBP13.19□□□□□ -0.3
FOXCUT-201ENST00000628509 C1orf141Q5JVX7 400 aa13.19□□□□□ -0.3
FOXCUT-201ENST00000628509 TOM1L2Q6ZVM7 507 aa13.19□□□□□ -0.3
FOXCUT-201ENST00000628509 CHMP4AQ9BY43 222 aa13.19□□□□□ -0.3
FOXCUT-201ENST00000628509 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms