RNA–Protein interactions for RNA: ENST00000626584.2

TCF4-254, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 1,701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-254ENST00000626584 ZBTB40Q9NUA8 1239 aa12.73□□□□□ -0.37
TCF4-254ENST00000626584 PIK3R4Q99570 1358 aa12.73□□□□□ -0.37
TCF4-254ENST00000626584 TOPAZ1Q8N9V7 1692 aa12.73□□□□□ -0.37
TCF4-254ENST00000626584 PTCH1Q13635 1447 aa12.72□□□□□ -0.37
TCF4-254ENST00000626584 DLG5Q8TDM6 1919 aa12.72□□□□□ -0.37
TCF4-254ENST00000626584 PLEKHG5O94827 1062 aa12.72□□□□□ -0.37
TCF4-254ENST00000626584 ARHGAP45Q92619 1136 aa12.72□□□□□ -0.37
TCF4-254ENST00000626584 TNRQ92752 1358 aa12.71□□□□□ -0.37
TCF4-254ENST00000626584 ZNF853P0CG23 659 aa12.71□□□□□ -0.37
TCF4-254ENST00000626584 ITPRIPQ8IWB1 547 aa12.71□□□□□ -0.37
TCF4-254ENST00000626584 TMEM57Q8N5G2 664 aa12.71□□□□□ -0.37
TCF4-254ENST00000626584 NUDT16Q96DE0 195 aaKnown RBP12.71□□□□□ -0.37
TCF4-254ENST00000626584 UPF2Q9HAU5 1272 aaKnown RBP12.71□□□□□ -0.37
TCF4-254ENST00000626584 IFT57Q9NWB7 429 aa12.71□□□□□ -0.37
TCF4-254ENST00000626584 ZNF692Q9BU19 519 aaPredicted RBP12.71□□□□□ -0.38
TCF4-254ENST00000626584 CCDC61Q9Y6R9 512 aa12.71□□□□□ -0.38
TCF4-254ENST00000626584 GNAI1P63096 354 aa12.7□□□□□ -0.38
TCF4-254ENST00000626584 LMOD3Q0VAK6 560 aa12.7□□□□□ -0.38
TCF4-254ENST00000626584 CHMP4BQ9H444 224 aaKnown RBP12.7□□□□□ -0.38
TCF4-254ENST00000626584 VAMP4O75379 141 aa12.69□□□□□ -0.38
TCF4-254ENST00000626584 NME9Q86XW9 330 aa12.69□□□□□ -0.38
TCF4-254ENST00000626584 MRPL50Q8N5N7 158 aaKnown RBP12.69□□□□□ -0.38
TCF4-254ENST00000626584 PHACTR3Q96KR7 559 aa12.69□□□□□ -0.38
TCF4-254ENST00000626584 EMILIN1Q9Y6C2 1016 aa12.69□□□□□ -0.38
TCF4-254ENST00000626584 TMEM2Q9UHN6 1383 aa12.69□□□□□ -0.38
TCF4-254ENST00000626584 NALCNQ8IZF0 1738 aa12.69□□□□□ -0.38
TCF4-254ENST00000626584 COG3Q96JB2 828 aa12.68□□□□□ -0.38
TCF4-254ENST00000626584 ADAMTS13Q76LX8 1427 aa12.68□□□□□ -0.38
TCF4-254ENST00000626584 MLECQ14165 292 aa12.68□□□□□ -0.38
TCF4-254ENST00000626584 TXNDC2Q86VQ3 553 aa12.68□□□□□ -0.38
TCF4-254ENST00000626584 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.67□□□□□ -0.38
TCF4-254ENST00000626584 KIF24Q5T7B8 1368 aa12.67□□□□□ -0.38
TCF4-254ENST00000626584 GSE1Q14687 1217 aa12.67□□□□□ -0.38
TCF4-254ENST00000626584 ESF1Q9H501 851 aaKnown RBP12.67□□□□□ -0.38
TCF4-254ENST00000626584 PLEKHG1Q9ULL1 1385 aa12.67□□□□□ -0.38
TCF4-254ENST00000626584 FBLN1P23142 703 aa12.66□□□□□ -0.38
TCF4-254ENST00000626584 NUCB1Q02818 461 aa12.66□□□□□ -0.38
TCF4-254ENST00000626584 PRR36Q9H6K5 1346 aa12.66□□□□□ -0.38
TCF4-254ENST00000626584 RGPD1P0DJD0 1748 aa12.66□□□□□ -0.38
TCF4-254ENST00000626584 OVOS2A0A0J9YW53 1432 aa12.66□□□□□ -0.38
TCF4-254ENST00000626584 OVOS2Q6IE36 1432 aa12.66□□□□□ -0.38
TCF4-254ENST00000626584 HMOX1P09601 288 aa12.65□□□□□ -0.38
TCF4-254ENST00000626584 CFAP44Q96MT7 982 aa12.65□□□□□ -0.38
TCF4-254ENST00000626584 ZRANB1Q9UGI0 708 aa12.65□□□□□ -0.38
TCF4-254ENST00000626584 ABCC4O15439 1325 aa12.65□□□□□ -0.38
TCF4-254ENST00000626584 PLEKHG3A1L390 1219 aa12.65□□□□□ -0.38
TCF4-254ENST00000626584 ZBTB7BO15156 539 aaPredicted RBP12.65□□□□□ -0.38
TCF4-254ENST00000626584 ROBO2Q9HCK4 1378 aa12.65□□□□□ -0.39
TCF4-254ENST00000626584 ANTXR1Q9H6X2 564 aa12.64□□□□□ -0.39
TCF4-254ENST00000626584 MBIPQ9NS73 344 aa12.64□□□□□ -0.39
TCF4-254ENST00000626584 FRAT2O75474 233 aaPredicted RBP12.63□□□□□ -0.39
TCF4-254ENST00000626584 GCC1Q96CN9 775 aa12.63□□□□□ -0.39
TCF4-254ENST00000626584 TTC21BQ7Z4L5 1316 aa12.63□□□□□ -0.39
TCF4-254ENST00000626584 USP31Q70CQ4 1352 aa12.62□□□□□ -0.39
TCF4-254ENST00000626584 TSPYL6Q8N831 410 aa12.62□□□□□ -0.39
TCF4-254ENST00000626584 TBC1D2Q9BYX2 928 aa12.62□□□□□ -0.39
TCF4-254ENST00000626584 PEAK1Q9H792 1746 aa12.62□□□□□ -0.39
TCF4-254ENST00000626584 RIMS1Q86UR5 1692 aaKnown RBP12.62□□□□□ -0.39
TCF4-254ENST00000626584 USP6P35125 1406 aa12.62□□□□□ -0.39
TCF4-254ENST00000626584 SSH2Q76I76 1423 aa12.62□□□□□ -0.39
TCF4-254ENST00000626584 TWISTNBQ3B726 338 aaPredicted RBP12.62□□□□□ -0.39
TCF4-254ENST00000626584 CHD1LQ86WJ1 897 aa12.62□□□□□ -0.39
TCF4-254ENST00000626584 THUMPD2Q9BTF0 503 aaKnown RBP12.62□□□□□ -0.39
TCF4-254ENST00000626584 C22orf23Q9BZE7 217 aa12.62□□□□□ -0.39
TCF4-254ENST00000626584 API5Q9BZZ5 524 aaKnown RBP12.62□□□□□ -0.39
TCF4-254ENST00000626584 NCKAP5LQ9HCH0 1330 aa12.61□□□□□ -0.39
TCF4-254ENST00000626584 RRS1Q15050 365 aaKnown RBP12.61□□□□□ -0.39
TCF4-254ENST00000626584 SLIT1O75093 1534 aa12.61□□□□□ -0.39
TCF4-254ENST00000626584 ARHGAP23Q9P227 1491 aa12.61□□□□□ -0.39
TCF4-254ENST00000626584 FMN2Q9NZ56 1722 aa12.6□□□□□ -0.39
TCF4-254ENST00000626584 KIAA0232Q92628 1395 aa12.6□□□□□ -0.39
TCF4-254ENST00000626584 DIP2AQ14689 1571 aa12.6□□□□□ -0.39
TCF4-254ENST00000626584 HAP1P54257 671 aaPredicted RBP12.59□□□□□ -0.39
TCF4-254ENST00000626584 EIF4A2Q14240 407 aaKnown RBP12.59□□□□□ -0.39
TCF4-254ENST00000626584 BMP2KLQ5H9B9 411 aa12.59□□□□□ -0.39
TCF4-254ENST00000626584 PTPRUQ92729 1446 aa12.59□□□□□ -0.39
TCF4-254ENST00000626584 ACEP12821 1306 aa12.59□□□□□ -0.39
TCF4-254ENST00000626584 RBM25P49756 843 aaKnown RBP12.59□□□□□ -0.39
TCF4-254ENST00000626584 C8orf58Q8NAV2 365 aa12.59□□□□□ -0.39
TCF4-254ENST00000626584 TTC21AQ8NDW8 1320 aa12.58□□□□□ -0.4
TCF4-254ENST00000626584 FBXO3Q9UK99 471 aa12.58□□□□□ -0.4
TCF4-254ENST00000626584 ARHGEF10O15013 1369 aa12.58□□□□□ -0.4
TCF4-254ENST00000626584 CHL1O00533 1208 aa12.57□□□□□ -0.4
TCF4-254ENST00000626584 MFAP1P55081 439 aaKnown RBP12.57□□□□□ -0.4
TCF4-254ENST00000626584 USP54Q70EL1 1684 aa12.57□□□□□ -0.4
TCF4-254ENST00000626584 LTKP29376 864 aa12.57□□□□□ -0.4
TCF4-254ENST00000626584 INTS3Q68E01 1043 aaKnown RBP12.57□□□□□ -0.4
TCF4-254ENST00000626584 SIRT2Q8IXJ6 389 aa12.57□□□□□ -0.4
TCF4-254ENST00000626584 LNPKQ9C0E8 428 aa12.57□□□□□ -0.4
TCF4-254ENST00000626584 NCOA3Q9Y6Q9 1424 aa12.57□□□□□ -0.4
TCF4-254ENST00000626584 RGS12O14924 1447 aa12.56□□□□□ -0.4
TCF4-254ENST00000626584 FAM83GA6ND36 823 aa12.56□□□□□ -0.4
TCF4-254ENST00000626584 PLCB2Q00722 1185 aa12.56□□□□□ -0.4
TCF4-254ENST00000626584 SNX21Q969T3 373 aa12.56□□□□□ -0.4
TCF4-254ENST00000626584 CRB1P82279 1406 aa12.55□□□□□ -0.4
TCF4-254ENST00000626584 SULT6B1Q6IMI4 303 aa12.55□□□□□ -0.4
TCF4-254ENST00000626584 SLKQ9H2G2 1235 aaPredicted RBP12.55□□□□□ -0.4
TCF4-254ENST00000626584 TBX22Q9Y458 520 aa12.55□□□□□ -0.4
TCF4-254ENST00000626584 XRN1Q8IZH2 1706 aaKnown RBP12.54□□□□□ -0.4
TCF4-254ENST00000626584 ANKRD45Q5TZF3 282 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms