RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 EMILIN1Q9Y6C2 1016 aa15.62■□□□□ 0.09
LINC00963-220ENST00000625171 MARF1Q9Y4F3 1742 aaKnown RBP15.62■□□□□ 0.09
LINC00963-220ENST00000625171 SLIT3O75094 1523 aa15.62■□□□□ 0.09
LINC00963-220ENST00000625171 SPATA31A3Q5VYP0 1347 aa15.62■□□□□ 0.09
LINC00963-220ENST00000625171 RTL1A6NKG5 1358 aa15.62■□□□□ 0.09
LINC00963-220ENST00000625171 RUNDC1Q96C34 613 aa15.61■□□□□ 0.09
LINC00963-220ENST00000625171 MAP3K19Q56UN5 1328 aa15.61■□□□□ 0.09
LINC00963-220ENST00000625171 ARHGEF10O15013 1369 aa15.61■□□□□ 0.09
LINC00963-220ENST00000625171 FLT4P35916 1363 aa15.61■□□□□ 0.09
LINC00963-220ENST00000625171 ALS2Q96Q42 1657 aa15.6■□□□□ 0.09
LINC00963-220ENST00000625171 FBLN1P23142 703 aa15.6■□□□□ 0.09
LINC00963-220ENST00000625171 PHRF1Q9P1Y6 1649 aaKnown RBP15.59■□□□□ 0.09
LINC00963-220ENST00000625171 GCP02774 474 aa15.59■□□□□ 0.09
LINC00963-220ENST00000625171 RRS1Q15050 365 aaKnown RBP15.59■□□□□ 0.09
LINC00963-220ENST00000625171 CCDC27Q2M243 656 aa15.59■□□□□ 0.09
LINC00963-220ENST00000625171 PLEKHF1Q96S99 279 aa15.59■□□□□ 0.09
LINC00963-220ENST00000625171 TNS3Q68CZ2 1445 aa15.59■□□□□ 0.09
LINC00963-220ENST00000625171 NFAT5O94916 1531 aa15.58■□□□□ 0.09
LINC00963-220ENST00000625171 ZNF521Q96K83 1311 aa15.58■□□□□ 0.08
LINC00963-220ENST00000625171 U2AF1L5P0DN76 240 aaPredicted RBP15.57■□□□□ 0.08
LINC00963-220ENST00000625171 U2AF1Q01081 240 aaKnown RBP eCLIP15.57■□□□□ 0.08
LINC00963-220ENST00000625171 ARHGEF25Q86VW2 580 aa15.57■□□□□ 0.08
LINC00963-220ENST00000625171 IP6K1Q92551 441 aa15.57■□□□□ 0.08
LINC00963-220ENST00000625171 FNBP4Q8N3X1 1017 aaPredicted RBP15.56■□□□□ 0.08
LINC00963-220ENST00000625171 TRPC5Q9UL62 973 aaPredicted RBP15.56■□□□□ 0.08
LINC00963-220ENST00000625171 PPM1GO15355 546 aaPredicted RBP15.55■□□□□ 0.08
LINC00963-220ENST00000625171 ADAMTS2O95450 1211 aa15.55■□□□□ 0.08
LINC00963-220ENST00000625171 HOXC9P31274 260 aa15.55■□□□□ 0.08
LINC00963-220ENST00000625171 EIF4A2Q14240 407 aaKnown RBP15.55■□□□□ 0.08
LINC00963-220ENST00000625171 DDX17Q92841 729 aaKnown RBP15.55■□□□□ 0.08
LINC00963-220ENST00000625171 ABCC6O95255 1503 aa15.54■□□□□ 0.08
LINC00963-220ENST00000625171 APAF1O14727 1248 aa15.54■□□□□ 0.08
LINC00963-220ENST00000625171 AMPHP49418 695 aa15.54■□□□□ 0.08
LINC00963-220ENST00000625171 HSP90AB2PQ58FF8 381 aa15.54■□□□□ 0.08
LINC00963-220ENST00000625171 CCDC125Q86Z20 511 aa15.54■□□□□ 0.08
LINC00963-220ENST00000625171 RSPH6AQ9H0K4 717 aa15.54■□□□□ 0.08
LINC00963-220ENST00000625171 USP21Q9UK80 565 aa15.54■□□□□ 0.08
LINC00963-220ENST00000625171 PEAK1Q9H792 1746 aa15.54■□□□□ 0.08
LINC00963-220ENST00000625171 ATRNO75882 1429 aa15.53■□□□□ 0.08
LINC00963-220ENST00000625171 CPDO75976 1380 aa15.53■□□□□ 0.08
LINC00963-220ENST00000625171 U2SURPO15042 1029 aaKnown RBP15.53■□□□□ 0.08
LINC00963-220ENST00000625171 XPCQ01831 940 aaPredicted RBP15.53■□□□□ 0.08
LINC00963-220ENST00000625171 TCP11L2Q8N4U5 519 aa15.53■□□□□ 0.08
LINC00963-220ENST00000625171 KDRP35968 1356 aa15.52■□□□□ 0.08
LINC00963-220ENST00000625171 NUTM2GQ5VZR2 741 aa15.52■□□□□ 0.08
LINC00963-220ENST00000625171 COL22A1Q8NFW1 1626 aaPredicted RBP15.52■□□□□ 0.08
LINC00963-220ENST00000625171 IGSF1Q8N6C5 1336 aa15.51■□□□□ 0.07
LINC00963-220ENST00000625171 WDR63Q8IWG1 891 aa15.51■□□□□ 0.07
LINC00963-220ENST00000625171 RGPD1P0DJD0 1748 aa15.51■□□□□ 0.07
LINC00963-220ENST00000625171 EP400Q96L91 3159 aa15.5■□□□□ 0.07
LINC00963-220ENST00000625171 TRMT2AQ8IZ69 625 aaKnown RBP15.5■□□□□ 0.07
LINC00963-220ENST00000625171 NEFMP07197 916 aa15.49■□□□□ 0.07
LINC00963-220ENST00000625171 WWC1Q8IX03 1113 aa15.49■□□□□ 0.07
LINC00963-220ENST00000625171 CCDC146Q8IYE0 955 aa15.49■□□□□ 0.07
LINC00963-220ENST00000625171 PLEKHG2Q9H7P9 1386 aa15.49■□□□□ 0.07
LINC00963-220ENST00000625171 TMPOP42166 694 aaKnown RBP15.48■□□□□ 0.07
LINC00963-220ENST00000625171 GOLGA2Q08379 1002 aa15.48■□□□□ 0.07
LINC00963-220ENST00000625171 NCAPD2Q15021 1401 aa15.48■□□□□ 0.07
LINC00963-220ENST00000625171 PRKAR2BP31323 418 aa15.47■□□□□ 0.07
LINC00963-220ENST00000625171 LMOD2Q6P5Q4 547 aa15.47■□□□□ 0.07
LINC00963-220ENST00000625171 EYA1Q99502 592 aa15.47■□□□□ 0.07
LINC00963-220ENST00000625171 CRYBG1Q9Y4K1 1723 aa15.47■□□□□ 0.07
LINC00963-220ENST00000625171 IL16Q14005 1332 aa15.46■□□□□ 0.07
LINC00963-220ENST00000625171 MAPK8IP3Q9UPT6 1336 aa15.46■□□□□ 0.07
LINC00963-220ENST00000625171 BCL9LQ86UU0 1499 aa15.46■□□□□ 0.06
LINC00963-220ENST00000625171 LTN1O94822 1766 aa15.45■□□□□ 0.06
LINC00963-220ENST00000625171 SOX12O15370 315 aa15.45■□□□□ 0.06
LINC00963-220ENST00000625171 SLFN5Q08AF3 891 aa15.45■□□□□ 0.06
LINC00963-220ENST00000625171 NFE2L2Q16236 605 aa15.45■□□□□ 0.06
LINC00963-220ENST00000625171 SULT6B1Q6IMI4 303 aa15.45■□□□□ 0.06
LINC00963-220ENST00000625171 E9PSI1 815 aa15.44■□□□□ 0.06
LINC00963-220ENST00000625171 HMOX1P09601 288 aa15.43■□□□□ 0.06
LINC00963-220ENST00000625171 PHACTR3Q96KR7 559 aa15.43■□□□□ 0.06
LINC00963-220ENST00000625171 TRIM35Q9UPQ4 493 aa15.43■□□□□ 0.06
LINC00963-220ENST00000625171 COL18A1P39060 1754 aa15.43■□□□□ 0.06
LINC00963-220ENST00000625171 LMOD3Q0VAK6 560 aa15.42■□□□□ 0.06
LINC00963-220ENST00000625171 DUSP27Q5VZP5 1158 aa15.42■□□□□ 0.06
LINC00963-220ENST00000625171 GJD4Q96KN9 370 aaPredicted RBP15.42■□□□□ 0.06
LINC00963-220ENST00000625171 AXIN2Q9Y2T1 843 aa15.42■□□□□ 0.06
LINC00963-220ENST00000625171 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.41■□□□□ 0.06
LINC00963-220ENST00000625171 HTATSF1O43719 755 aaKnown RBP15.41■□□□□ 0.06
LINC00963-220ENST00000625171 RIPK4P57078 832 aa15.41■□□□□ 0.06
LINC00963-220ENST00000625171 CALD1Q05682 793 aaKnown RBP15.41■□□□□ 0.06
LINC00963-220ENST00000625171 ERBB3P21860 1342 aa15.41■□□□□ 0.06
LINC00963-220ENST00000625171 RNF123Q5XPI4 1314 aa15.41■□□□□ 0.06
LINC00963-220ENST00000625171 ZC3H6P61129 1189 aaKnown RBP15.4■□□□□ 0.06
LINC00963-220ENST00000625171 NBPF6Q5VWK0 638 aa15.4■□□□□ 0.06
LINC00963-220ENST00000625171 ANKRD24Q8TF21 1146 aa15.4■□□□□ 0.06
LINC00963-220ENST00000625171 CDCA7LQ96GN5 454 aa15.4■□□□□ 0.06
LINC00963-220ENST00000625171 NBPF4Q96M43 638 aa15.4■□□□□ 0.06
LINC00963-220ENST00000625171 KIAA0232Q92628 1395 aa15.39■□□□□ 0.05
LINC00963-220ENST00000625171 CAMTA1Q9Y6Y1 1673 aa15.39■□□□□ 0.05
LINC00963-220ENST00000625171 AEBP1Q8IUX7 1158 aa15.39■□□□□ 0.05
LINC00963-220ENST00000625171 CABLES1Q8TDN4 633 aa15.39■□□□□ 0.05
LINC00963-220ENST00000625171 SALL2Q9Y467 1007 aaPredicted RBP15.39■□□□□ 0.05
LINC00963-220ENST00000625171 SLIT2O94813 1529 aa15.38■□□□□ 0.05
LINC00963-220ENST00000625171 GAS2L2Q8NHY3 880 aa15.38■□□□□ 0.05
LINC00963-220ENST00000625171 LMO7Q8WWI1 1683 aa15.38■□□□□ 0.05
LINC00963-220ENST00000625171 CT47B1P0C2W7 299 aaPredicted RBP15.37■□□□□ 0.05
LINC00963-220ENST00000625171 UNC5CLQ8IV45 518 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms