RNA–Protein interactions for RNA: ENST00000624909.1

PCDHB9-203, Transcript of protocadherin beta 9, humanhuman

TSL 3

Gene PCDHB9, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-203ENST00000624909 JCADQ9P266 1359 aa11.24□□□□□ -0.61
PCDHB9-203ENST00000624909 PPIP5K1Q6PFW1 1433 aa11.24□□□□□ -0.61
PCDHB9-203ENST00000624909 USP32Q8NFA0 1604 aa11.24□□□□□ -0.61
PCDHB9-203ENST00000624909 KRT28Q7Z3Y7 464 aa11.23□□□□□ -0.61
PCDHB9-203ENST00000624909 CABP1Q9NZU7 370 aa11.23□□□□□ -0.61
PCDHB9-203ENST00000624909 SPATA31A6Q5VVP1 1343 aa11.23□□□□□ -0.61
PCDHB9-203ENST00000624909 ARHGEF10O15013 1369 aa11.23□□□□□ -0.61
PCDHB9-203ENST00000624909 ACEP12821 1306 aa11.22□□□□□ -0.61
PCDHB9-203ENST00000624909 HDGFL2Q7Z4V5 671 aaPredicted RBP11.22□□□□□ -0.61
PCDHB9-203ENST00000624909 PMFBP1Q8TBY8 1022 aa11.22□□□□□ -0.61
PCDHB9-203ENST00000624909 PHLPP1O60346 1717 aa11.21□□□□□ -0.61
PCDHB9-203ENST00000624909 TOPAZ1Q8N9V7 1692 aa11.21□□□□□ -0.61
PCDHB9-203ENST00000624909 PXDNQ92626 1479 aa11.21□□□□□ -0.61
PCDHB9-203ENST00000624909 SPATA31A3Q5VYP0 1347 aa11.21□□□□□ -0.61
PCDHB9-203ENST00000624909 COL16A1Q07092 1604 aaPredicted RBP11.2□□□□□ -0.62
PCDHB9-203ENST00000624909 CPSF1Q10570 1443 aaKnown RBP11.2□□□□□ -0.62
PCDHB9-203ENST00000624909 DISP3Q9P2K9 1392 aa11.2□□□□□ -0.62
PCDHB9-203ENST00000624909 TTC21AQ8NDW8 1320 aa11.19□□□□□ -0.62
PCDHB9-203ENST00000624909 PPP1R37O75864 691 aa11.19□□□□□ -0.62
PCDHB9-203ENST00000624909 LHX8Q68G74 356 aa11.19□□□□□ -0.62
PCDHB9-203ENST00000624909 TMC1Q8TDI8 760 aa11.19□□□□□ -0.62
PCDHB9-203ENST00000624909 TRIM35Q9UPQ4 493 aa11.19□□□□□ -0.62
PCDHB9-203ENST00000624909 USP6P35125 1406 aa11.18□□□□□ -0.62
PCDHB9-203ENST00000624909 TNS3Q68CZ2 1445 aa11.18□□□□□ -0.62
PCDHB9-203ENST00000624909 ANKRD36BQ8N2N9 1353 aa11.18□□□□□ -0.62
PCDHB9-203ENST00000624909 RGPD8O14715 1765 aaPredicted RBP11.18□□□□□ -0.62
PCDHB9-203ENST00000624909 KTN1Q86UP2 1357 aaKnown RBP11.17□□□□□ -0.62
PCDHB9-203ENST00000624909 MS4A4AQ96JQ5 239 aa11.17□□□□□ -0.62
PCDHB9-203ENST00000624909 SLC12A5Q9H2X9 1139 aa11.17□□□□□ -0.62
PCDHB9-203ENST00000624909 SHPRHQ149N8 1683 aa11.17□□□□□ -0.62
PCDHB9-203ENST00000624909 EDC4Q6P2E9 1401 aaKnown RBP11.17□□□□□ -0.62
PCDHB9-203ENST00000624909 SSH2Q76I76 1423 aa11.17□□□□□ -0.62
PCDHB9-203ENST00000624909 PNPLA6Q8IY17 1366 aa11.16□□□□□ -0.62
PCDHB9-203ENST00000624909 NLRP13Q86W25 1043 aa11.16□□□□□ -0.62
PCDHB9-203ENST00000624909 DDX17Q92841 729 aaKnown RBP11.16□□□□□ -0.62
PCDHB9-203ENST00000624909 GABBR2O75899 941 aa11.15□□□□□ -0.62
PCDHB9-203ENST00000624909 ABTB2Q8N961 1025 aa11.15□□□□□ -0.62
PCDHB9-203ENST00000624909 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.15□□□□□ -0.62
PCDHB9-203ENST00000624909 COL22A1Q8NFW1 1626 aaPredicted RBP11.15□□□□□ -0.62
PCDHB9-203ENST00000624909 TTC21BQ7Z4L5 1316 aa11.14□□□□□ -0.63
PCDHB9-203ENST00000624909 XPCQ01831 940 aaPredicted RBP11.14□□□□□ -0.63
PCDHB9-203ENST00000624909 ASTLQ6HA08 431 aaPredicted RBP11.14□□□□□ -0.63
PCDHB9-203ENST00000624909 A0A1W2PP64 1363 aa11.14□□□□□ -0.63
PCDHB9-203ENST00000624909 CD163L1Q9NR16 1453 aa11.13□□□□□ -0.63
PCDHB9-203ENST00000624909 ATMINO43313 823 aaPredicted RBP11.13□□□□□ -0.63
PCDHB9-203ENST00000624909 ATN1P54259 1190 aaPredicted RBP11.13□□□□□ -0.63
PCDHB9-203ENST00000624909 KCNH5Q8NCM2 988 aa11.13□□□□□ -0.63
PCDHB9-203ENST00000624909 TRPM3Q9HCF6 1732 aaPredicted RBP11.12□□□□□ -0.63
PCDHB9-203ENST00000624909 KIF7Q2M1P5 1343 aa11.12□□□□□ -0.63
PCDHB9-203ENST00000624909 MED1Q15648 1581 aaPredicted RBP11.12□□□□□ -0.63
PCDHB9-203ENST00000624909 LMOD2Q6P5Q4 547 aa11.12□□□□□ -0.63
PCDHB9-203ENST00000624909 WDR70Q9NW82 654 aa11.12□□□□□ -0.63
PCDHB9-203ENST00000624909 AKAP12Q02952 1782 aa11.12□□□□□ -0.63
PCDHB9-203ENST00000624909 USP31Q70CQ4 1352 aa11.12□□□□□ -0.63
PCDHB9-203ENST00000624909 ALS2Q96Q42 1657 aa11.11□□□□□ -0.63
PCDHB9-203ENST00000624909 CCDC7Q96M83 1385 aa11.11□□□□□ -0.63
PCDHB9-203ENST00000624909 USP19O94966 1318 aa11.1□□□□□ -0.63
PCDHB9-203ENST00000624909 CGNL1Q0VF96 1302 aa11.1□□□□□ -0.63
PCDHB9-203ENST00000624909 MON2Q7Z3U7 1717 aa11.1□□□□□ -0.63
PCDHB9-203ENST00000624909 C11orf95C9JLR9 678 aaPredicted RBP11.1□□□□□ -0.63
PCDHB9-203ENST00000624909 IER5LQ5T953 404 aa11.1□□□□□ -0.63
PCDHB9-203ENST00000624909 WASHC2AQ641Q2 1341 aa11.09□□□□□ -0.63
PCDHB9-203ENST00000624909 NSD2O96028 1365 aa11.09□□□□□ -0.63
PCDHB9-203ENST00000624909 CPDO75976 1380 aa11.08□□□□□ -0.64
PCDHB9-203ENST00000624909 GCP02774 474 aa11.08□□□□□ -0.64
PCDHB9-203ENST00000624909 MEX3CQ5U5Q3 659 aaKnown RBP11.08□□□□□ -0.64
PCDHB9-203ENST00000624909 COG3Q96JB2 828 aa11.08□□□□□ -0.64
PCDHB9-203ENST00000624909 DCBLD2Q96PD2 775 aa11.08□□□□□ -0.64
PCDHB9-203ENST00000624909 POLR3GLQ9BT43 218 aa11.08□□□□□ -0.64
PCDHB9-203ENST00000624909 PANK3Q9H999 370 aa11.08□□□□□ -0.64
PCDHB9-203ENST00000624909 KNSTRNQ9Y448 316 aa11.08□□□□□ -0.64
PCDHB9-203ENST00000624909 NRKQ7Z2Y5 1582 aa11.07□□□□□ -0.64
PCDHB9-203ENST00000624909 FYB1O15117 783 aa11.07□□□□□ -0.64
PCDHB9-203ENST00000624909 ZNF772Q68DY9 489 aaPredicted RBP11.07□□□□□ -0.64
PCDHB9-203ENST00000624909 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.07□□□□□ -0.64
PCDHB9-203ENST00000624909 FNBP4Q8N3X1 1017 aaPredicted RBP11.07□□□□□ -0.64
PCDHB9-203ENST00000624909 CARD14Q9BXL6 1004 aa11.07□□□□□ -0.64
PCDHB9-203ENST00000624909 MYOM1P52179 1685 aa11.07□□□□□ -0.64
PCDHB9-203ENST00000624909 NPC1L1Q9UHC9 1359 aa11.06□□□□□ -0.64
PCDHB9-203ENST00000624909 USP54Q70EL1 1684 aa11.06□□□□□ -0.64
PCDHB9-203ENST00000624909 NUTM2BA6NNL0 878 aaPredicted RBP11.06□□□□□ -0.64
PCDHB9-203ENST00000624909 NUTM2EB1AL46 878 aaPredicted RBP11.06□□□□□ -0.64
PCDHB9-203ENST00000624909 NBR1Q14596 966 aa11.06□□□□□ -0.64
PCDHB9-203ENST00000624909 NUTM2AQ8IVF1 878 aaPredicted RBP11.06□□□□□ -0.64
PCDHB9-203ENST00000624909 NSD3Q9BZ95 1437 aa11.06□□□□□ -0.64
PCDHB9-203ENST00000624909 KIF24Q5T7B8 1368 aa11.05□□□□□ -0.64
PCDHB9-203ENST00000624909 SLIT3O75094 1523 aa11.05□□□□□ -0.64
PCDHB9-203ENST00000624909 OVOS2A0A0J9YW53 1432 aa11.05□□□□□ -0.64
PCDHB9-203ENST00000624909 OVOS2Q6IE36 1432 aa11.05□□□□□ -0.64
PCDHB9-203ENST00000624909 NGLY1Q96IV0 654 aa11.05□□□□□ -0.64
PCDHB9-203ENST00000624909 PIK3C2AO00443 1686 aa11.04□□□□□ -0.64
PCDHB9-203ENST00000624909 ABCC6O95255 1503 aa11.04□□□□□ -0.64
PCDHB9-203ENST00000624909 PER1O15534 1290 aaPredicted RBP11.04□□□□□ -0.64
PCDHB9-203ENST00000624909 ADAMTS2O95450 1211 aa11.04□□□□□ -0.64
PCDHB9-203ENST00000624909 IRX5P78411 483 aaPredicted RBP11.04□□□□□ -0.64
PCDHB9-203ENST00000624909 NME9Q86XW9 330 aa11.04□□□□□ -0.64
PCDHB9-203ENST00000624909 CABLES1Q8TDN4 633 aa11.04□□□□□ -0.64
PCDHB9-203ENST00000624909 OCEL1Q9H607 264 aa11.04□□□□□ -0.64
PCDHB9-203ENST00000624909 PRDM11Q9NQV5 511 aa11.04□□□□□ -0.64
PCDHB9-203ENST00000624909 LRP6O75581 1613 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms