RNA–Protein interactions for RNA: ENST00000624277.3

CCDC187-204, Transcript of coiled-coil domain containing 187, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC187, Length 3,918 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-204ENST00000624277 TNPO1Q92973 898 aaKnown RBP15.93■□□□□ 0.14
CCDC187-204ENST00000624277 GCC1Q96CN9 775 aa15.93■□□□□ 0.14
CCDC187-204ENST00000624277 SIL1Q9H173 461 aa15.93■□□□□ 0.14
CCDC187-204ENST00000624277 BLMP54132 1417 aaPredicted RBP15.93■□□□□ 0.14
CCDC187-204ENST00000624277 TRAPPC8Q9Y2L5 1435 aa15.93■□□□□ 0.14
CCDC187-204ENST00000624277 PSME1Q06323 249 aa15.93■□□□□ 0.14
CCDC187-204ENST00000624277 NUDT16Q96DE0 195 aaKnown RBP15.93■□□□□ 0.14
CCDC187-204ENST00000624277 PTMSP20962 102 aa15.92■□□□□ 0.14
CCDC187-204ENST00000624277 NUTM1Q86Y26 1132 aa15.92■□□□□ 0.14
CCDC187-204ENST00000624277 PHACTR3Q96KR7 559 aa15.92■□□□□ 0.14
CCDC187-204ENST00000624277 MADDQ8WXG6 1647 aa15.92■□□□□ 0.14
CCDC187-204ENST00000624277 SCAF11Q99590 1463 aaKnown RBP15.92■□□□□ 0.14
CCDC187-204ENST00000624277 GNL2Q13823 731 aaKnown RBP15.91■□□□□ 0.14
CCDC187-204ENST00000624277 TBC1D9Q6ZT07 1266 aa15.91■□□□□ 0.14
CCDC187-204ENST00000624277 AAMPQ13685 434 aa15.91■□□□□ 0.14
CCDC187-204ENST00000624277 ANXA1P04083 346 aa15.91■□□□□ 0.14
CCDC187-204ENST00000624277 C1orf141Q5JVX7 400 aa15.91■□□□□ 0.14
CCDC187-204ENST00000624277 HDGFL1Q5TGJ6 251 aa15.91■□□□□ 0.14
CCDC187-204ENST00000624277 AEBP1Q8IUX7 1158 aa15.91■□□□□ 0.14
CCDC187-204ENST00000624277 C14orf93Q9H972 538 aaKnown RBP15.9■□□□□ 0.14
CCDC187-204ENST00000624277 SMC3Q9UQE7 1217 aa15.9■□□□□ 0.14
CCDC187-204ENST00000624277 ZNF592Q92610 1267 aa15.9■□□□□ 0.14
CCDC187-204ENST00000624277 GPATCH3Q96I76 525 aa15.9■□□□□ 0.14
CCDC187-204ENST00000624277 TOMM22Q9NS69 142 aa15.9■□□□□ 0.14
CCDC187-204ENST00000624277 ESPNB1AK53 854 aa15.9■□□□□ 0.14
CCDC187-204ENST00000624277 CEBPZQ03701 1054 aaKnown RBP15.9■□□□□ 0.14
CCDC187-204ENST00000624277 WDR7Q9Y4E6 1490 aa15.9■□□□□ 0.14
CCDC187-204ENST00000624277 MBIPQ9NS73 344 aa15.89■□□□□ 0.14
CCDC187-204ENST00000624277 CEBPAP49715 358 aaPredicted RBP15.89■□□□□ 0.13
CCDC187-204ENST00000624277 C8orf58Q8NAV2 365 aa15.89■□□□□ 0.13
CCDC187-204ENST00000624277 SLC52A1Q9NWF4 448 aa15.89■□□□□ 0.13
CCDC187-204ENST00000624277 TAF7LQ5H9L4 462 aa15.89■□□□□ 0.13
CCDC187-204ENST00000624277 CCDC61Q9Y6R9 512 aa15.89■□□□□ 0.13
CCDC187-204ENST00000624277 H3BQV1 296 aa15.88■□□□□ 0.13
CCDC187-204ENST00000624277 IFFO2Q5TF58 517 aa15.88■□□□□ 0.13
CCDC187-204ENST00000624277 CREBRFQ8IUR6 639 aa15.88■□□□□ 0.13
CCDC187-204ENST00000624277 RTEL1-TNFRSF6BF6WH68 1400 aa15.88■□□□□ 0.13
CCDC187-204ENST00000624277 CFAP65Q6ZU64 1925 aaKnown RBP15.88■□□□□ 0.13
CCDC187-204ENST00000624277 STK3Q13188 491 aa15.88■□□□□ 0.13
CCDC187-204ENST00000624277 ATAD2Q6PL18 1390 aa15.88■□□□□ 0.13
CCDC187-204ENST00000624277 NPHP1O15259 732 aa15.88■□□□□ 0.13
CCDC187-204ENST00000624277 GNAI2P04899 355 aa15.88■□□□□ 0.13
CCDC187-204ENST00000624277 XRCC6P12956 609 aaKnown RBP eCLIP15.88■□□□□ 0.13
CCDC187-204ENST00000624277 RABEP1Q15276 862 aa15.88■□□□□ 0.13
CCDC187-204ENST00000624277 SPHKAPQ2M3C7 1700 aa15.88■□□□□ 0.13
CCDC187-204ENST00000624277 SYCE3A1L190 88 aa15.87■□□□□ 0.13
CCDC187-204ENST00000624277 CWC27Q6UX04 472 aaKnown RBP15.87■□□□□ 0.13
CCDC187-204ENST00000624277 NEUROD6Q96NK8 337 aa15.87■□□□□ 0.13
CCDC187-204ENST00000624277 PPFIA3O75145 1194 aa15.87■□□□□ 0.13
CCDC187-204ENST00000624277 ATP10AO60312 1499 aa15.87■□□□□ 0.13
CCDC187-204ENST00000624277 ZKSCAN1P17029 563 aaPredicted RBP15.87■□□□□ 0.13
CCDC187-204ENST00000624277 HSP90AB2PQ58FF8 381 aa15.87■□□□□ 0.13
CCDC187-204ENST00000624277 FERMT3Q86UX7 667 aa15.86■□□□□ 0.13
CCDC187-204ENST00000624277 FAM184AQ8NB25 1140 aa15.86■□□□□ 0.13
CCDC187-204ENST00000624277 SPC24Q8NBT2 197 aa15.86■□□□□ 0.13
CCDC187-204ENST00000624277 NLRP2Q9NX02 1062 aa15.86■□□□□ 0.13
CCDC187-204ENST00000624277 RBM27Q9P2N5 1060 aaKnown RBP15.86■□□□□ 0.13
CCDC187-204ENST00000624277 KDM2BQ8NHM5 1336 aa15.86■□□□□ 0.13
CCDC187-204ENST00000624277 SRGAP3O43295 1099 aa15.86■□□□□ 0.13
CCDC187-204ENST00000624277 BICD2Q8TD16 824 aa15.86■□□□□ 0.13
CCDC187-204ENST00000624277 CEP152O94986 1710 aa15.86■□□□□ 0.13
CCDC187-204ENST00000624277 ERC2O15083 957 aa15.86■□□□□ 0.13
CCDC187-204ENST00000624277 MEIS3Q99687 375 aa15.86■□□□□ 0.13
CCDC187-204ENST00000624277 G3BP1Q13283 466 aaKnown RBP eCLIP15.85■□□□□ 0.13
CCDC187-204ENST00000624277 SF3A1Q15459 793 aaKnown RBP15.85■□□□□ 0.13
CCDC187-204ENST00000624277 ZMYM4Q5VZL5 1548 aa15.85■□□□□ 0.13
CCDC187-204ENST00000624277 RIC3Q7Z5B4 369 aa15.84■□□□□ 0.13
CCDC187-204ENST00000624277 LRRCC1Q9C099 1032 aa15.84■□□□□ 0.13
CCDC187-204ENST00000624277 ADGRL1O94910 1474 aa15.84■□□□□ 0.13
CCDC187-204ENST00000624277 ESCO1Q5FWF5 840 aa15.84■□□□□ 0.13
CCDC187-204ENST00000624277 MYL6BP14649 208 aa15.83■□□□□ 0.13
CCDC187-204ENST00000624277 CCDC30Q5VVM6 783 aa15.83■□□□□ 0.13
CCDC187-204ENST00000624277 STK11IPQ8N1F8 1099 aa15.83■□□□□ 0.13
CCDC187-204ENST00000624277 CLASRPQ8N2M8 674 aaKnown RBP15.83■□□□□ 0.13
CCDC187-204ENST00000624277 OTUD7AQ8TE49 926 aaPredicted RBP15.83■□□□□ 0.13
CCDC187-204ENST00000624277 GNAI3P08754 354 aa15.83■□□□□ 0.12
CCDC187-204ENST00000624277 FOXO3O43524 673 aa15.83■□□□□ 0.12
CCDC187-204ENST00000624277 CLTCL1P53675 1640 aa15.83■□□□□ 0.12
CCDC187-204ENST00000624277 PHF14O94880 888 aa15.82■□□□□ 0.12
CCDC187-204ENST00000624277 CT47B1P0C2W7 299 aaPredicted RBP15.82■□□□□ 0.12
CCDC187-204ENST00000624277 NEXNQ0ZGT2 675 aa15.82■□□□□ 0.12
CCDC187-204ENST00000624277 DNAJC2Q99543 621 aaKnown RBP15.82■□□□□ 0.12
CCDC187-204ENST00000624277 DEPDC5O75140 1603 aa15.82■□□□□ 0.12
CCDC187-204ENST00000624277 FSD1Q9BTV5 496 aa15.81■□□□□ 0.12
CCDC187-204ENST00000624277 POLKQ9UBT6 870 aa15.81■□□□□ 0.12
CCDC187-204ENST00000624277 JARID2Q92833 1246 aaPredicted RBP15.81■□□□□ 0.12
CCDC187-204ENST00000624277 CCDC85AQ96PX6 553 aaPredicted RBP15.81■□□□□ 0.12
CCDC187-204ENST00000624277 BECN2A8MW95 431 aa15.8■□□□□ 0.12
CCDC187-204ENST00000624277 GAS2L2Q8NHY3 880 aa15.8■□□□□ 0.12
CCDC187-204ENST00000624277 ASXL1Q8IXJ9 1541 aa15.8■□□□□ 0.12
CCDC187-204ENST00000624277 FMNL2Q96PY5 1086 aa15.8■□□□□ 0.12
CCDC187-204ENST00000624277 EIF2AK4Q9P2K8 1649 aaKnown RBP15.79■□□□□ 0.12
CCDC187-204ENST00000624277 SYTL4Q96C24 671 aaPredicted RBP15.79■□□□□ 0.12
CCDC187-204ENST00000624277 SPG7Q9UQ90 795 aa15.79■□□□□ 0.12
CCDC187-204ENST00000624277 LRRFIP2Q9Y608 721 aaKnown RBP15.79■□□□□ 0.12
CCDC187-204ENST00000624277 ZCCHC11Q5TAX3 1644 aaKnown RBP15.79■□□□□ 0.12
CCDC187-204ENST00000624277 FANCAO15360 1455 aa15.79■□□□□ 0.12
CCDC187-204ENST00000624277 RUFY2Q8WXA3 655 aa15.79■□□□□ 0.12
CCDC187-204ENST00000624277 CHAMP1Q96JM3 812 aa15.79■□□□□ 0.12
CCDC187-204ENST00000624277 NINLQ9Y2I6 1382 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms