RNA–Protein interactions for RNA: ENST00000623316.1

ATRX-210, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 803 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-210ENST00000623316 USP17L17D6RBQ6 530 aa9.61□□□□□ -0.87
ATRX-210ENST00000623316 USP17L19D6RCP7 530 aa9.61□□□□□ -0.87
ATRX-210ENST00000623316 USP17L20D6RJB6 530 aa9.61□□□□□ -0.87
ATRX-210ENST00000623316 CCNYL3P0C7X3 344 aa9.61□□□□□ -0.87
ATRX-210ENST00000623316 BCAMP50895 628 aa9.61□□□□□ -0.87
ATRX-210ENST00000623316 USP17L24Q0WX57 530 aa9.61□□□□□ -0.87
ATRX-210ENST00000623316 PDXDC2PQ6P474 469 aa9.61□□□□□ -0.87
ATRX-210ENST00000623316 RNF135Q8IUD6 432 aa9.61□□□□□ -0.87
ATRX-210ENST00000623316 CCER1Q8TC90 406 aaPredicted RBP9.61□□□□□ -0.87
ATRX-210ENST00000623316 CEP126Q9P2H0 1117 aa9.61□□□□□ -0.87
ATRX-210ENST00000623316 GPSM3Q9Y4H4 160 aa9.61□□□□□ -0.87
ATRX-210ENST00000623316 RASA1P20936 1047 aa9.6□□□□□ -0.87
ATRX-210ENST00000623316 MCCD1P59942 119 aaPredicted RBP9.6□□□□□ -0.87
ATRX-210ENST00000623316 LSM11P83369 360 aaKnown RBP eCLIP9.6□□□□□ -0.87
ATRX-210ENST00000623316 NCOA4Q13772 614 aa9.6□□□□□ -0.87
ATRX-210ENST00000623316 GPKOWQ92917 476 aaPredicted RBP eCLIP9.6□□□□□ -0.87
ATRX-210ENST00000623316 NUDT12Q9BQG2 462 aa9.6□□□□□ -0.87
ATRX-210ENST00000623316 EVA1BQ9NVM1 165 aa9.6□□□□□ -0.87
ATRX-210ENST00000623316 ATP5J2-PTCD1G3V325 749 aa9.59□□□□□ -0.87
ATRX-210ENST00000623316 KCNH2Q12809 1159 aa9.59□□□□□ -0.87
ATRX-210ENST00000623316 MSS51Q4VC12 460 aa9.59□□□□□ -0.87
ATRX-210ENST00000623316 CRTC2Q53ET0 693 aaPredicted RBP9.59□□□□□ -0.87
ATRX-210ENST00000623316 NBPF14Q5TI25 921 aa9.59□□□□□ -0.87
ATRX-210ENST00000623316 HRO43593 1189 aa9.58□□□□□ -0.88
ATRX-210ENST00000623316 PLPP7Q8NBV4 271 aa9.58□□□□□ -0.88
ATRX-210ENST00000623316 FAM200AQ8TCP9 573 aa9.58□□□□□ -0.88
ATRX-210ENST00000623316 HS3ST6Q96QI5 342 aa9.58□□□□□ -0.88
ATRX-210ENST00000623316 E9PSI1 815 aa9.57□□□□□ -0.88
ATRX-210ENST00000623316 LZTS3O60299 673 aaPredicted RBP9.57□□□□□ -0.88
ATRX-210ENST00000623316 DXOO77932 396 aaKnown RBP9.57□□□□□ -0.88
ATRX-210ENST00000623316 PTK7Q13308 1070 aa9.57□□□□□ -0.88
ATRX-210ENST00000623316 SPSB2Q99619 263 aa9.57□□□□□ -0.88
ATRX-210ENST00000623316 MYT1LQ9UL68 1186 aa9.57□□□□□ -0.88
ATRX-210ENST00000623316 ABCC8Q09428 1581 aa9.57□□□□□ -0.88
ATRX-210ENST00000623316 DNMBPQ6XZF7 1577 aa9.57□□□□□ -0.88
ATRX-210ENST00000623316 EML3Q32P44 896 aa9.56□□□□□ -0.88
ATRX-210ENST00000623316 TXNDC2Q86VQ3 553 aa9.56□□□□□ -0.88
ATRX-210ENST00000623316 WNT2BQ93097 391 aa9.56□□□□□ -0.88
ATRX-210ENST00000623316 OCSTAMPQ9BR26 566 aa9.56□□□□□ -0.88
ATRX-210ENST00000623316 ARHGAP9Q9BRR9 750 aa9.56□□□□□ -0.88
ATRX-210ENST00000623316 AMOTL2Q9Y2J4 779 aa9.56□□□□□ -0.88
ATRX-210ENST00000623316 CUX1P39880 1505 aa9.56□□□□□ -0.88
ATRX-210ENST00000623316 PHLDB3Q6NSJ2 640 aa9.55□□□□□ -0.88
ATRX-210ENST00000623316 PHTF2Q8N3S3 785 aa9.55□□□□□ -0.88
ATRX-210ENST00000623316 FAM160A2Q8N612 972 aaPredicted RBP9.55□□□□□ -0.88
ATRX-210ENST00000623316 ADAM32Q8TC27 787 aa9.55□□□□□ -0.88
ATRX-210ENST00000623316 CDCA7Q9BWT1 371 aaPredicted RBP9.55□□□□□ -0.88
ATRX-210ENST00000623316 SSFA2P28290 1259 aa9.54□□□□□ -0.88
ATRX-210ENST00000623316 ARID4AP29374 1257 aaPredicted RBP9.54□□□□□ -0.88
ATRX-210ENST00000623316 MMP16P51512 607 aa9.54□□□□□ -0.88
ATRX-210ENST00000623316 MAP7D1Q3KQU3 841 aa9.54□□□□□ -0.88
ATRX-210ENST00000623316 ZBTB33Q86T24 672 aa9.54□□□□□ -0.88
ATRX-210ENST00000623316 ANKMY2Q8IV38 441 aa9.54□□□□□ -0.88
ATRX-210ENST00000623316 PRDM9Q9NQV7 894 aa9.54□□□□□ -0.88
ATRX-210ENST00000623316 ZNF608Q9ULD9 1512 aaPredicted RBP9.54□□□□□ -0.88
ATRX-210ENST00000623316 POLA1P09884 1462 aaPredicted RBP9.53□□□□□ -0.88
ATRX-210ENST00000623316 IFT140Q96RY7 1462 aa9.53□□□□□ -0.88
ATRX-210ENST00000623316 POTEB3A0JP26 581 aa9.53□□□□□ -0.88
ATRX-210ENST00000623316 COPS2P61201 443 aa9.53□□□□□ -0.88
ATRX-210ENST00000623316 POTEBQ6S5H4 581 aa9.53□□□□□ -0.88
ATRX-210ENST00000623316 ANKRD13DQ6ZTN6 518 aa9.53□□□□□ -0.88
ATRX-210ENST00000623316 OGFOD1Q8N543 542 aa9.53□□□□□ -0.88
ATRX-210ENST00000623316 RAD54L2Q9Y4B4 1467 aa9.53□□□□□ -0.88
ATRX-210ENST00000623316 CLP1Q92989 425 aaKnown RBP9.52□□□□□ -0.89
ATRX-210ENST00000623316 WBP1LQ9NX94 342 aa9.52□□□□□ -0.89
ATRX-210ENST00000623316 SOGA1O94964 1423 aa9.51□□□□□ -0.89
ATRX-210ENST00000623316 FAM69CQ0P6D2 419 aa9.51□□□□□ -0.89
ATRX-210ENST00000623316 DPYDQ12882 1025 aa9.51□□□□□ -0.89
ATRX-210ENST00000623316 TRIM50Q86XT4 487 aa9.51□□□□□ -0.89
ATRX-210ENST00000623316 DZIP3Q86Y13 1208 aaKnown RBP9.51□□□□□ -0.89
ATRX-210ENST00000623316 CCDC24Q8N4L8 307 aa9.51□□□□□ -0.89
ATRX-210ENST00000623316 ZNF594Q96JF6 807 aaPredicted RBP9.51□□□□□ -0.89
ATRX-210ENST00000623316 SLAIN2Q9P270 581 aa9.51□□□□□ -0.89
ATRX-210ENST00000623316 TARBP1Q13395 1621 aaKnown RBP9.5□□□□□ -0.89
ATRX-210ENST00000623316 ATP2B4P23634 1241 aa9.5□□□□□ -0.89
ATRX-210ENST00000623316 ATP1A2P50993 1020 aa9.5□□□□□ -0.89
ATRX-210ENST00000623316 TRAF7Q6Q0C0 670 aa9.5□□□□□ -0.89
ATRX-210ENST00000623316 UNC93B1Q9H1C4 597 aa9.5□□□□□ -0.89
ATRX-210ENST00000623316 CHIC2Q9UKJ5 165 aa9.5□□□□□ -0.89
ATRX-210ENST00000623316 NOD1Q9Y239 953 aa9.5□□□□□ -0.89
ATRX-210ENST00000623316 FGD5Q6ZNL6 1462 aa9.5□□□□□ -0.89
ATRX-210ENST00000623316 AQRO60306 1485 aaKnown RBP eCLIP9.49□□□□□ -0.89
ATRX-210ENST00000623316 CLDN10P78369 228 aa9.49□□□□□ -0.89
ATRX-210ENST00000623316 SWI5Q1ZZU3 235 aa9.49□□□□□ -0.89
ATRX-210ENST00000623316 CARD14Q9BXL6 1004 aa9.49□□□□□ -0.89
ATRX-210ENST00000623316 DNAAF2Q9NVR5 837 aaKnown RBP9.49□□□□□ -0.89
ATRX-210ENST00000623316 DOLKQ9UPQ8 538 aa9.49□□□□□ -0.89
ATRX-210ENST00000623316 TDRD9Q8NDG6 1382 aaKnown RBP9.49□□□□□ -0.89
ATRX-210ENST00000623316 TSGA10IPQ3SY00 556 aa9.48□□□□□ -0.89
ATRX-210ENST00000623316 SH3BP5LQ7L8J4 393 aa9.48□□□□□ -0.89
ATRX-210ENST00000623316 FAM163AQ96GL9 167 aaPredicted RBP9.48□□□□□ -0.89
ATRX-210ENST00000623316 WRNQ14191 1432 aaPredicted RBP eCLIP9.48□□□□□ -0.89
ATRX-210ENST00000623316 MAGEB6P1A0A0J9YX57 407 aa9.47□□□□□ -0.89
ATRX-210ENST00000623316 OXLD1Q5BKU9 147 aa9.47□□□□□ -0.89
ATRX-210ENST00000623316 LHX8Q68G74 356 aa9.47□□□□□ -0.89
ATRX-210ENST00000623316 RBM19Q9Y4C8 960 aaKnown RBP9.47□□□□□ -0.89
ATRX-210ENST00000623316 TLL1O43897 1013 aa9.46□□□□□ -0.9
ATRX-210ENST00000623316 ADH1BP00325 375 aa9.46□□□□□ -0.9
ATRX-210ENST00000623316 SERPINB4P48594 390 aa9.46□□□□□ -0.9
ATRX-210ENST00000623316 PTCRAQ6ISU1 281 aaPredicted RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms