RNA–Protein interactions for RNA: ENST00000622875.4

EBF1-211, Transcript of early B cell factor 1, humanhuman

TSL 5 BASIC

Gene EBF1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-211ENST00000622875 THRAP3Q9Y2W1 955 aaKnown RBP8.04□□□□□ -1.12
EBF1-211ENST00000622875 KIAA1551Q9HCM1 1747 aa8.04□□□□□ -1.12
EBF1-211ENST00000622875 NAIPQ13075 1403 aa8.04□□□□□ -1.12
EBF1-211ENST00000622875 KIF13BQ9NQT8 1826 aa8.04□□□□□ -1.12
EBF1-211ENST00000622875 PSME1Q06323 249 aa8.04□□□□□ -1.12
EBF1-211ENST00000622875 SSH2Q76I76 1423 aa8.03□□□□□ -1.12
EBF1-211ENST00000622875 KRT28Q7Z3Y7 464 aa8.03□□□□□ -1.12
EBF1-211ENST00000622875 PLEKHG2Q9H7P9 1386 aa8.03□□□□□ -1.12
EBF1-211ENST00000622875 PLEKHG5O94827 1062 aa8.02□□□□□ -1.12
EBF1-211ENST00000622875 TXNRD1Q16881 649 aa8.02□□□□□ -1.13
EBF1-211ENST00000622875 GCC1Q96CN9 775 aa8.02□□□□□ -1.13
EBF1-211ENST00000622875 HAP1P54257 671 aaPredicted RBP8.02□□□□□ -1.13
EBF1-211ENST00000622875 CD2APQ9Y5K6 639 aa8.02□□□□□ -1.13
EBF1-211ENST00000622875 XPCQ01831 940 aaPredicted RBP8.01□□□□□ -1.13
EBF1-211ENST00000622875 COL18A1P39060 1754 aa8□□□□□ -1.13
EBF1-211ENST00000622875 SMC1BQ8NDV3 1235 aa8□□□□□ -1.13
EBF1-211ENST00000622875 BTAF1O14981 1849 aa8□□□□□ -1.13
EBF1-211ENST00000622875 CABLES1Q8TDN4 633 aa8□□□□□ -1.13
EBF1-211ENST00000622875 ARFGEF1Q9Y6D6 1849 aa8□□□□□ -1.13
EBF1-211ENST00000622875 USP54Q70EL1 1684 aa8□□□□□ -1.13
EBF1-211ENST00000622875 MYOM3Q5VTT5 1437 aa7.99□□□□□ -1.13
EBF1-211ENST00000622875 BRCA1P38398 1863 aaKnown RBP7.99□□□□□ -1.13
EBF1-211ENST00000622875 ERICH6BQ5W0A0 696 aa7.99□□□□□ -1.13
EBF1-211ENST00000622875 LY75O60449 1722 aa7.98□□□□□ -1.13
EBF1-211ENST00000622875 NMRK2Q9NPI5 230 aa7.98□□□□□ -1.13
EBF1-211ENST00000622875 RTN4Q9NQC3 1192 aaKnown RBP7.98□□□□□ -1.13
EBF1-211ENST00000622875 TIMELESSQ9UNS1 1208 aa7.98□□□□□ -1.13
EBF1-211ENST00000622875 KIAA0232Q92628 1395 aa7.98□□□□□ -1.13
EBF1-211ENST00000622875 PPLO60437 1756 aa7.97□□□□□ -1.13
EBF1-211ENST00000622875 DLL1O00548 723 aa7.97□□□□□ -1.13
EBF1-211ENST00000622875 AKT1S1Q96B36 256 aa7.97□□□□□ -1.13
EBF1-211ENST00000622875 HMGB1P09429 215 aaKnown RBP7.97□□□□□ -1.13
EBF1-211ENST00000622875 C16orf71Q8IYS4 520 aaPredicted RBP7.97□□□□□ -1.13
EBF1-211ENST00000622875 TCP11L2Q8N4U5 519 aa7.96□□□□□ -1.13
EBF1-211ENST00000622875 HSPA8P11142 646 aaKnown RBP7.96□□□□□ -1.14
EBF1-211ENST00000622875 PDE4DIPQ5VU43 2346 aa7.96□□□□□ -1.14
EBF1-211ENST00000622875 CNTNAP1P78357 1384 aa7.95□□□□□ -1.14
EBF1-211ENST00000622875 ANKARQ7Z5J8 1434 aa7.95□□□□□ -1.14
EBF1-211ENST00000622875 CCDC85CA6NKD9 419 aa7.95□□□□□ -1.14
EBF1-211ENST00000622875 PMFBP1Q8TBY8 1022 aa7.95□□□□□ -1.14
EBF1-211ENST00000622875 AIDAQ96BJ3 306 aa7.95□□□□□ -1.14
EBF1-211ENST00000622875 WBP1LQ9NX94 342 aa7.95□□□□□ -1.14
EBF1-211ENST00000622875 ANKRD30BQ9BXX2 1392 aa7.94□□□□□ -1.14
EBF1-211ENST00000622875 KIF1BO60333 1816 aa7.94□□□□□ -1.14
EBF1-211ENST00000622875 ZNF827Q17R98 1081 aa7.94□□□□□ -1.14
EBF1-211ENST00000622875 POLR3GLQ9BT43 218 aa7.94□□□□□ -1.14
EBF1-211ENST00000622875 PNPLA7Q6ZV29 1317 aa7.94□□□□□ -1.14
EBF1-211ENST00000622875 SBF1O95248 1867 aa7.94□□□□□ -1.14
EBF1-211ENST00000622875 PKNOX2Q96KN3 472 aa7.93□□□□□ -1.14
EBF1-211ENST00000622875 CREBZFQ9NS37 354 aa7.93□□□□□ -1.14
EBF1-211ENST00000622875 LTBP1Q14766 1721 aa7.93□□□□□ -1.14
EBF1-211ENST00000622875 RTL5Q5HYW3 569 aaPredicted RBP7.92□□□□□ -1.14
EBF1-211ENST00000622875 ABCC6O95255 1503 aa7.92□□□□□ -1.14
EBF1-211ENST00000622875 CPDO75976 1380 aa7.92□□□□□ -1.14
EBF1-211ENST00000622875 PTF1AQ7RTS3 328 aa7.92□□□□□ -1.14
EBF1-211ENST00000622875 KCPQ6ZWJ8 1503 aa7.92□□□□□ -1.14
EBF1-211ENST00000622875 LBX1P52954 281 aa7.92□□□□□ -1.14
EBF1-211ENST00000622875 KDM2BQ8NHM5 1336 aa7.91□□□□□ -1.14
EBF1-211ENST00000622875 UBE2Q2Q8WVN8 375 aa7.91□□□□□ -1.14
EBF1-211ENST00000622875 ACIN1Q9UKV3 1341 aaKnown RBP7.91□□□□□ -1.14
EBF1-211ENST00000622875 KLHL34Q8N239 644 aa7.91□□□□□ -1.14
EBF1-211ENST00000622875 PHF8Q9UPP1 1060 aa7.91□□□□□ -1.14
EBF1-211ENST00000622875 COL5A2P05997 1499 aaPredicted RBP7.91□□□□□ -1.14
EBF1-211ENST00000622875 MEGF6O75095 1541 aa7.91□□□□□ -1.14
EBF1-211ENST00000622875 CRB1P82279 1406 aa7.9□□□□□ -1.14
EBF1-211ENST00000622875 TULP1O00294 542 aaPredicted RBP7.9□□□□□ -1.14
EBF1-211ENST00000622875 SPATA31E1Q6ZUB1 1445 aa7.9□□□□□ -1.14
EBF1-211ENST00000622875 CDK11BP21127 795 aaKnown RBP7.9□□□□□ -1.15
EBF1-211ENST00000622875 HABP4Q5JVS0 413 aaKnown RBP7.89□□□□□ -1.15
EBF1-211ENST00000622875 PRDM11Q9NQV5 511 aa7.89□□□□□ -1.15
EBF1-211ENST00000622875 PCNTO95613 3336 aa7.89□□□□□ -1.15
EBF1-211ENST00000622875 ZC3H4Q9UPT8 1303 aaKnown RBP7.89□□□□□ -1.15
EBF1-211ENST00000622875 NPM2Q86SE8 214 aaKnown RBP7.89□□□□□ -1.15
EBF1-211ENST00000622875 ITSN1Q15811 1721 aa7.89□□□□□ -1.15
EBF1-211ENST00000622875 DAPK1P53355 1430 aa7.88□□□□□ -1.15
EBF1-211ENST00000622875 IGSF1Q8N6C5 1336 aa7.88□□□□□ -1.15
EBF1-211ENST00000622875 SLC27A3Q5K4L6 730 aa7.87□□□□□ -1.15
EBF1-211ENST00000622875 ANKRD30AQ9BXX3 1397 aa7.87□□□□□ -1.15
EBF1-211ENST00000622875 GOLGB1Q14789 3259 aaKnown RBP7.87□□□□□ -1.15
EBF1-211ENST00000622875 CDCA7Q9BWT1 371 aaPredicted RBP7.87□□□□□ -1.15
EBF1-211ENST00000622875 TIAM2Q8IVF5 1701 aa7.87□□□□□ -1.15
EBF1-211ENST00000622875 NCLP19338 710 aaKnown RBP7.86□□□□□ -1.15
EBF1-211ENST00000622875 ABCC11Q96J66 1382 aa7.86□□□□□ -1.15
EBF1-211ENST00000622875 SIRT1Q96EB6 747 aa7.86□□□□□ -1.15
EBF1-211ENST00000622875 MARCH10Q8NA82 808 aaPredicted RBP7.86□□□□□ -1.15
EBF1-211ENST00000622875 C5P01031 1676 aa7.86□□□□□ -1.15
EBF1-211ENST00000622875 SLIT3O75094 1523 aa7.85□□□□□ -1.15
EBF1-211ENST00000622875 KDM6AO15550 1401 aaPredicted RBP7.85□□□□□ -1.15
EBF1-211ENST00000622875 TAF1LQ8IZX4 1826 aa7.85□□□□□ -1.15
EBF1-211ENST00000622875 N4BP2Q86UW6 1770 aaPredicted RBP7.85□□□□□ -1.15
EBF1-211ENST00000622875 FXR1P51114 621 aaKnown RBP eCLIP7.85□□□□□ -1.15
EBF1-211ENST00000622875 LARP1Q6PKG0 1096 aaKnown RBP7.85□□□□□ -1.15
EBF1-211ENST00000622875 MNX1P50219 401 aaPredicted RBP7.85□□□□□ -1.15
EBF1-211ENST00000622875 DDB1Q16531 1140 aa7.84□□□□□ -1.15
EBF1-211ENST00000622875 RRP7BPQ9NSQ0 103 aa7.84□□□□□ -1.15
EBF1-211ENST00000622875 LRRC4BQ9NT99 713 aa7.84□□□□□ -1.15
EBF1-211ENST00000622875 TOGARAM1Q9Y4F4 1720 aa7.84□□□□□ -1.15
EBF1-211ENST00000622875 GTF3C3Q9Y5Q9 886 aa7.84□□□□□ -1.15
EBF1-211ENST00000622875 PDE4CQ08493 712 aa7.83□□□□□ -1.16
EBF1-211ENST00000622875 STRN4Q9NRL3 753 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms