RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 PTPRMP28827 1452 aa15.51■□□□□ 0.07
LITAF-221ENST00000622633 LETM1O95202 739 aaPredicted RBP15.51■□□□□ 0.07
LITAF-221ENST00000622633 FBLN1P23142 703 aa15.51■□□□□ 0.07
LITAF-221ENST00000622633 HDGFL2Q7Z4V5 671 aaPredicted RBP15.51■□□□□ 0.07
LITAF-221ENST00000622633 GZF1Q9H116 711 aaPredicted RBP15.51■□□□□ 0.07
LITAF-221ENST00000622633 GRPEL1Q9HAV7 217 aa15.51■□□□□ 0.07
LITAF-221ENST00000622633 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.5■□□□□ 0.07
LITAF-221ENST00000622633 CCDC94Q9BW85 323 aaPredicted RBP15.5■□□□□ 0.07
LITAF-221ENST00000622633 YTHDC2Q9H6S0 1430 aaKnown RBP15.5■□□□□ 0.07
LITAF-221ENST00000622633 CD163L1Q9NR16 1453 aa15.5■□□□□ 0.07
LITAF-221ENST00000622633 ZMYM3Q14202 1370 aa15.49■□□□□ 0.07
LITAF-221ENST00000622633 IL16Q14005 1332 aa15.49■□□□□ 0.07
LITAF-221ENST00000622633 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.49■□□□□ 0.07
LITAF-221ENST00000622633 TMEM57Q8N5G2 664 aa15.49■□□□□ 0.07
LITAF-221ENST00000622633 DDX19BQ9UMR2 479 aa15.49■□□□□ 0.07
LITAF-221ENST00000622633 STAG3Q9UJ98 1225 aa15.48■□□□□ 0.07
LITAF-221ENST00000622633 HDAC1Q13547 482 aaPredicted RBP15.48■□□□□ 0.07
LITAF-221ENST00000622633 TBC1D2Q9BYX2 928 aa15.48■□□□□ 0.07
LITAF-221ENST00000622633 IRX3P78415 501 aaPredicted RBP15.47■□□□□ 0.07
LITAF-221ENST00000622633 R3HCC1Q9Y3T6 440 aaKnown RBP15.46■□□□□ 0.07
LITAF-221ENST00000622633 MYO5BQ9ULV0 1848 aa15.46■□□□□ 0.07
LITAF-221ENST00000622633 TMEM131LA2VDJ0 1609 aa15.46■□□□□ 0.07
LITAF-221ENST00000622633 WAPLQ7Z5K2 1190 aa15.46■□□□□ 0.07
LITAF-221ENST00000622633 ANTXR1Q9H6X2 564 aa15.46■□□□□ 0.07
LITAF-221ENST00000622633 PNPLA6Q8IY17 1366 aa15.45■□□□□ 0.06
LITAF-221ENST00000622633 UQCRHLA0A096LP55 91 aa15.45■□□□□ 0.06
LITAF-221ENST00000622633 UQCRHP07919 91 aa15.45■□□□□ 0.06
LITAF-221ENST00000622633 PRKAR2BP31323 418 aa15.45■□□□□ 0.06
LITAF-221ENST00000622633 DNTTIP2Q5QJE6 756 aaKnown RBP15.45■□□□□ 0.06
LITAF-221ENST00000622633 ZBTB40Q9NUA8 1239 aa15.45■□□□□ 0.06
LITAF-221ENST00000622633 MED14O60244 1454 aa15.45■□□□□ 0.06
LITAF-221ENST00000622633 FCHSD2O94868 740 aa15.44■□□□□ 0.06
LITAF-221ENST00000622633 CDK11BP21127 795 aaKnown RBP15.44■□□□□ 0.06
LITAF-221ENST00000622633 MFAP1P55081 439 aaKnown RBP15.44■□□□□ 0.06
LITAF-221ENST00000622633 TAF3Q5VWG9 929 aa15.44■□□□□ 0.06
LITAF-221ENST00000622633 SPRYD3Q8NCJ5 442 aa15.44■□□□□ 0.06
LITAF-221ENST00000622633 BCCIPQ9P287 314 aaKnown RBP eCLIP15.44■□□□□ 0.06
LITAF-221ENST00000622633 IPO8O15397 1037 aaKnown RBP15.44■□□□□ 0.06
LITAF-221ENST00000622633 HAP1P54257 671 aaPredicted RBP15.44■□□□□ 0.06
LITAF-221ENST00000622633 POLKQ9UBT6 870 aa15.44■□□□□ 0.06
LITAF-221ENST00000622633 DYNC1I1O14576 645 aa15.43■□□□□ 0.06
LITAF-221ENST00000622633 SMC5Q8IY18 1101 aa15.43■□□□□ 0.06
LITAF-221ENST00000622633 KCNG1Q9UIX4 513 aa15.43■□□□□ 0.06
LITAF-221ENST00000622633 C22orf23Q9BZE7 217 aa15.43■□□□□ 0.06
LITAF-221ENST00000622633 RICTORQ6R327 1708 aa15.43■□□□□ 0.06
LITAF-221ENST00000622633 HMOX1P09601 288 aa15.42■□□□□ 0.06
LITAF-221ENST00000622633 THUMPD2Q9BTF0 503 aaKnown RBP15.42■□□□□ 0.06
LITAF-221ENST00000622633 ARHGEF40Q8TER5 1519 aa15.42■□□□□ 0.06
LITAF-221ENST00000622633 PREX1Q8TCU6 1659 aa15.42■□□□□ 0.06
LITAF-221ENST00000622633 KIF16BQ96L93 1317 aa15.42■□□□□ 0.06
LITAF-221ENST00000622633 ZSCAN30Q86W11 494 aa15.42■□□□□ 0.06
LITAF-221ENST00000622633 PHACTR3Q96KR7 559 aa15.42■□□□□ 0.06
LITAF-221ENST00000622633 ALKQ9UM73 1620 aa15.42■□□□□ 0.06
LITAF-221ENST00000622633 MCM4P33991 863 aa15.4■□□□□ 0.06
LITAF-221ENST00000622633 ALDH1L2Q3SY69 923 aa15.4■□□□□ 0.06
LITAF-221ENST00000622633 ISY1Q9ULR0 285 aaKnown RBP15.4■□□□□ 0.06
LITAF-221ENST00000622633 LNPKQ9C0E8 428 aa15.39■□□□□ 0.05
LITAF-221ENST00000622633 CLTCQ00610 1675 aaKnown RBP15.39■□□□□ 0.05
LITAF-221ENST00000622633 MAPK8IP2Q13387 824 aaPredicted RBP15.39■□□□□ 0.05
LITAF-221ENST00000622633 CGNQ9P2M7 1197 aaKnown RBP15.39■□□□□ 0.05
LITAF-221ENST00000622633 ANKRD26Q9UPS8 1709 aa15.39■□□□□ 0.05
LITAF-221ENST00000622633 TRAK2O60296 914 aa15.38■□□□□ 0.05
LITAF-221ENST00000622633 NUCB1Q02818 461 aa15.38■□□□□ 0.05
LITAF-221ENST00000622633 NFE2L2Q16236 605 aa15.38■□□□□ 0.05
LITAF-221ENST00000622633 ZRANB1Q9UGI0 708 aa15.38■□□□□ 0.05
LITAF-221ENST00000622633 EMILIN1Q9Y6C2 1016 aa15.38■□□□□ 0.05
LITAF-221ENST00000622633 ELL2O00472 640 aaPredicted RBP15.38■□□□□ 0.05
LITAF-221ENST00000622633 IRX5P78411 483 aaPredicted RBP15.38■□□□□ 0.05
LITAF-221ENST00000622633 TSPYL6Q8N831 410 aa15.38■□□□□ 0.05
LITAF-221ENST00000622633 FAM135BQ49AJ0 1406 aa15.37■□□□□ 0.05
LITAF-221ENST00000622633 LRRC7Q96NW7 1537 aa15.37■□□□□ 0.05
LITAF-221ENST00000622633 VAMP4O75379 141 aa15.37■□□□□ 0.05
LITAF-221ENST00000622633 NME9Q86XW9 330 aa15.37■□□□□ 0.05
LITAF-221ENST00000622633 CERS3Q8IU89 383 aa15.37■□□□□ 0.05
LITAF-221ENST00000622633 CBX1P83916 185 aa15.36■□□□□ 0.05
LITAF-221ENST00000622633 CYB5RLQ6IPT4 315 aa15.36■□□□□ 0.05
LITAF-221ENST00000622633 MMP14P50281 582 aa15.36■□□□□ 0.05
LITAF-221ENST00000622633 CHD1LQ86WJ1 897 aa15.36■□□□□ 0.05
LITAF-221ENST00000622633 MRPL50Q8N5N7 158 aaKnown RBP15.36■□□□□ 0.05
LITAF-221ENST00000622633 C1orf115Q9H7X2 142 aa15.36■□□□□ 0.05
LITAF-221ENST00000622633 SLC20A2Q08357 652 aa15.35■□□□□ 0.05
LITAF-221ENST00000622633 MLECQ14165 292 aa15.35■□□□□ 0.05
LITAF-221ENST00000622633 CNPY4Q8N129 248 aa15.35■□□□□ 0.05
LITAF-221ENST00000622633 ZBTB7BO15156 539 aaPredicted RBP15.35■□□□□ 0.05
LITAF-221ENST00000622633 IL13P35225 146 aa15.35■□□□□ 0.05
LITAF-221ENST00000622633 MSNP26038 577 aaKnown RBP15.34■□□□□ 0.05
LITAF-221ENST00000622633 BRPF1P55201 1214 aaPredicted RBP15.34■□□□□ 0.05
LITAF-221ENST00000622633 FAM69CQ0P6D2 419 aa15.34■□□□□ 0.05
LITAF-221ENST00000622633 GAS2L3Q86XJ1 694 aa15.34■□□□□ 0.05
LITAF-221ENST00000622633 HOMEZQ8IX15 550 aa15.34■□□□□ 0.05
LITAF-221ENST00000622633 ANKRD45Q5TZF3 282 aa15.34■□□□□ 0.05
LITAF-221ENST00000622633 ZNF428Q96B54 188 aa15.34■□□□□ 0.05
LITAF-221ENST00000622633 PPP1R9BQ96SB3 815 aa15.34■□□□□ 0.05
LITAF-221ENST00000622633 NCKAP5LQ9HCH0 1330 aa15.33■□□□□ 0.05
LITAF-221ENST00000622633 KIF20BQ96Q89 1820 aa15.33■□□□□ 0.04
LITAF-221ENST00000622633 WASLO00401 505 aaPredicted RBP15.33■□□□□ 0.04
LITAF-221ENST00000622633 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.33■□□□□ 0.04
LITAF-221ENST00000622633 MBIPQ9NS73 344 aa15.33■□□□□ 0.04
LITAF-221ENST00000622633 RIMS2Q9UQ26 1411 aa15.33■□□□□ 0.04
LITAF-221ENST00000622633 GNAI1P63096 354 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms