RNA–Protein interactions for RNA: ENST00000622134.4

COL25A1-209, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 4,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-209ENST00000622134 MBD3O95983 291 aa12.55□□□□□ -0.4
COL25A1-209ENST00000622134 NBPF1Q3BBV0 1214 aa12.55□□□□□ -0.4
COL25A1-209ENST00000622134 RILPL2Q969X0 211 aa12.55□□□□□ -0.4
COL25A1-209ENST00000622134 DHX16O60231 1041 aaKnown RBP12.55□□□□□ -0.4
COL25A1-209ENST00000622134 XPCQ01831 940 aaPredicted RBP12.55□□□□□ -0.4
COL25A1-209ENST00000622134 FCHSD2O94868 740 aa12.55□□□□□ -0.4
COL25A1-209ENST00000622134 TRIM29Q14134 588 aa12.55□□□□□ -0.4
COL25A1-209ENST00000622134 LRRC59Q96AG4 307 aaKnown RBP12.55□□□□□ -0.4
COL25A1-209ENST00000622134 ZNF428Q96B54 188 aa12.55□□□□□ -0.4
COL25A1-209ENST00000622134 CIZ1Q9ULV3 898 aaPredicted RBP12.55□□□□□ -0.4
COL25A1-209ENST00000622134 LMTK3Q96Q04 1460 aa12.54□□□□□ -0.4
COL25A1-209ENST00000622134 ANKRD45Q5TZF3 282 aa12.54□□□□□ -0.4
COL25A1-209ENST00000622134 GOLGA6L19H0YKK7 550 aa12.54□□□□□ -0.4
COL25A1-209ENST00000622134 RAD21O60216 631 aa12.54□□□□□ -0.4
COL25A1-209ENST00000622134 MCTP1Q6DN14 999 aa12.54□□□□□ -0.4
COL25A1-209ENST00000622134 CLASRPQ8N2M8 674 aaKnown RBP12.54□□□□□ -0.4
COL25A1-209ENST00000622134 ZNF592Q92610 1267 aa12.54□□□□□ -0.4
COL25A1-209ENST00000622134 NEUROD6Q96NK8 337 aa12.54□□□□□ -0.4
COL25A1-209ENST00000622134 MPHOSPH8Q99549 860 aa12.54□□□□□ -0.4
COL25A1-209ENST00000622134 CNNM1Q9NRU3 951 aa12.54□□□□□ -0.4
COL25A1-209ENST00000622134 TMOD2Q9NZR1 351 aa12.54□□□□□ -0.4
COL25A1-209ENST00000622134 NAIPQ13075 1403 aa12.54□□□□□ -0.4
COL25A1-209ENST00000622134 ITSN2Q9NZM3 1697 aa12.54□□□□□ -0.4
COL25A1-209ENST00000622134 A0A087WZG4 1122 aa12.53□□□□□ -0.4
COL25A1-209ENST00000622134 NBPF8Q3BBV2 869 aa12.53□□□□□ -0.4
COL25A1-209ENST00000622134 NBPF14Q5TI25 921 aa12.53□□□□□ -0.4
COL25A1-209ENST00000622134 TTC21AQ8NDW8 1320 aa12.53□□□□□ -0.4
COL25A1-209ENST00000622134 CCDC47Q96A33 483 aaKnown RBP12.53□□□□□ -0.4
COL25A1-209ENST00000622134 GPATCH8Q9UKJ3 1502 aaKnown RBP12.53□□□□□ -0.4
COL25A1-209ENST00000622134 SASS6Q6UVJ0 657 aa12.53□□□□□ -0.4
COL25A1-209ENST00000622134 FAM184AQ8NB25 1140 aa12.53□□□□□ -0.4
COL25A1-209ENST00000622134 COG6Q9Y2V7 657 aa12.53□□□□□ -0.4
COL25A1-209ENST00000622134 TTC21BQ7Z4L5 1316 aa12.53□□□□□ -0.4
COL25A1-209ENST00000622134 TCP11L2Q8N4U5 519 aa12.53□□□□□ -0.4
COL25A1-209ENST00000622134 PPP2R1AP30153 589 aa12.52□□□□□ -0.4
COL25A1-209ENST00000622134 SF3A1Q15459 793 aaKnown RBP12.52□□□□□ -0.4
COL25A1-209ENST00000622134 SMARCC1Q92922 1105 aaPredicted RBP12.52□□□□□ -0.4
COL25A1-209ENST00000622134 CCDC27Q2M243 656 aa12.52□□□□□ -0.41
COL25A1-209ENST00000622134 C14orf93Q9H972 538 aaKnown RBP12.52□□□□□ -0.41
COL25A1-209ENST00000622134 HIP1O00291 1037 aa12.52□□□□□ -0.41
COL25A1-209ENST00000622134 WAPLQ7Z5K2 1190 aa12.52□□□□□ -0.41
COL25A1-209ENST00000622134 RALYLQ86SE5 291 aaKnown RBP12.52□□□□□ -0.41
COL25A1-209ENST00000622134 ATP10AO60312 1499 aa12.52□□□□□ -0.41
COL25A1-209ENST00000622134 LETM1O95202 739 aaPredicted RBP12.51□□□□□ -0.41
COL25A1-209ENST00000622134 CCT4P50991 539 aaKnown RBP12.51□□□□□ -0.41
COL25A1-209ENST00000622134 GNAT3A8MTJ3 354 aa12.51□□□□□ -0.41
COL25A1-209ENST00000622134 DYNC1I1O14576 645 aa12.51□□□□□ -0.41
COL25A1-209ENST00000622134 CPLX1O14810 134 aa12.51□□□□□ -0.41
COL25A1-209ENST00000622134 CCDC43Q96MW1 224 aaKnown RBP12.51□□□□□ -0.41
COL25A1-209ENST00000622134 SART3Q15020 963 aaKnown RBP12.51□□□□□ -0.41
COL25A1-209ENST00000622134 CCDC158Q5M9N0 1113 aa12.51□□□□□ -0.41
COL25A1-209ENST00000622134 IFT57Q9NWB7 429 aa12.51□□□□□ -0.41
COL25A1-209ENST00000622134 NSD2O96028 1365 aa12.51□□□□□ -0.41
COL25A1-209ENST00000622134 NEO1Q92859 1461 aa12.51□□□□□ -0.41
COL25A1-209ENST00000622134 BBXQ8WY36 941 aaPredicted RBP12.51□□□□□ -0.41
COL25A1-209ENST00000622134 BCL2L13Q9BXK5 485 aa12.51□□□□□ -0.41
COL25A1-209ENST00000622134 RIMS2Q9UQ26 1411 aa12.5□□□□□ -0.41
COL25A1-209ENST00000622134 KIAA0556O60303 1618 aa12.5□□□□□ -0.41
COL25A1-209ENST00000622134 FAM177BA6PVY3 158 aa12.5□□□□□ -0.41
COL25A1-209ENST00000622134 BTBD11A6QL63 1104 aa12.5□□□□□ -0.41
COL25A1-209ENST00000622134 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.5□□□□□ -0.41
COL25A1-209ENST00000622134 TBX22Q9Y458 520 aa12.5□□□□□ -0.41
COL25A1-209ENST00000622134 CAVIN1Q6NZI2 390 aaKnown RBP12.5□□□□□ -0.41
COL25A1-209ENST00000622134 IGHMBP2P38935 993 aaKnown RBP12.5□□□□□ -0.41
COL25A1-209ENST00000622134 TWISTNBQ3B726 338 aaPredicted RBP12.5□□□□□ -0.41
COL25A1-209ENST00000622134 BCL11BQ9C0K0 894 aaPredicted RBP12.5□□□□□ -0.41
COL25A1-209ENST00000622134 BECN2A8MW95 431 aa12.49□□□□□ -0.41
COL25A1-209ENST00000622134 MCM5P33992 734 aa12.49□□□□□ -0.41
COL25A1-209ENST00000622134 CCDC57Q2TAC2 916 aa12.49□□□□□ -0.41
COL25A1-209ENST00000622134 ZSCAN25Q6NSZ9 544 aa12.49□□□□□ -0.41
COL25A1-209ENST00000622134 AK7Q96M32 723 aa12.49□□□□□ -0.41
COL25A1-209ENST00000622134 KIF21AQ7Z4S6 1674 aa12.49□□□□□ -0.41
COL25A1-209ENST00000622134 H3BQV1 296 aa12.49□□□□□ -0.41
COL25A1-209ENST00000622134 IFFO2Q5TF58 517 aa12.49□□□□□ -0.41
COL25A1-209ENST00000622134 CDCA7Q9BWT1 371 aaPredicted RBP12.49□□□□□ -0.41
COL25A1-209ENST00000622134 FOXD4L5Q5VV16 416 aaPredicted RBP12.49□□□□□ -0.41
COL25A1-209ENST00000622134 FOXD4L4Q8WXT5 416 aaPredicted RBP12.49□□□□□ -0.41
COL25A1-209ENST00000622134 SRCIN1Q9C0H9 1055 aa12.49□□□□□ -0.41
COL25A1-209ENST00000622134 ACBD3Q9H3P7 528 aa12.49□□□□□ -0.41
COL25A1-209ENST00000622134 ZMYM3Q14202 1370 aa12.49□□□□□ -0.41
COL25A1-209ENST00000622134 WASHC4Q2M389 1173 aa12.49□□□□□ -0.41
COL25A1-209ENST00000622134 TSPY26PQ9H489 355 aa12.49□□□□□ -0.41
COL25A1-209ENST00000622134 CALCOCO1Q9P1Z2 691 aa12.49□□□□□ -0.41
COL25A1-209ENST00000622134 NOS1P29475 1434 aa12.48□□□□□ -0.41
COL25A1-209ENST00000622134 NOC3LQ8WTT2 800 aaKnown RBP12.48□□□□□ -0.41
COL25A1-209ENST00000622134 XBP1P17861 261 aa12.48□□□□□ -0.41
COL25A1-209ENST00000622134 WDR63Q8IWG1 891 aa12.48□□□□□ -0.41
COL25A1-209ENST00000622134 IFNL2Q8IZJ0 200 aa12.48□□□□□ -0.41
COL25A1-209ENST00000622134 NFXL1Q6ZNB6 911 aa12.48□□□□□ -0.41
COL25A1-209ENST00000622134 SAFBQ15424 915 aaKnown RBP eCLIP12.47□□□□□ -0.41
COL25A1-209ENST00000622134 NUP153P49790 1475 aaKnown RBP12.47□□□□□ -0.41
COL25A1-209ENST00000622134 ZHX1Q9UKY1 873 aaPredicted RBP12.47□□□□□ -0.41
COL25A1-209ENST00000622134 CEP89Q96ST8 783 aa12.46□□□□□ -0.41
COL25A1-209ENST00000622134 NACAP1Q9BZK3 213 aa12.46□□□□□ -0.41
COL25A1-209ENST00000622134 MNS1Q8NEH6 495 aa12.46□□□□□ -0.41
COL25A1-209ENST00000622134 PRDM10Q9NQV6 1147 aa12.46□□□□□ -0.41
COL25A1-209ENST00000622134 NSD3Q9BZ95 1437 aa12.46□□□□□ -0.41
COL25A1-209ENST00000622134 GNAI2P04899 355 aa12.46□□□□□ -0.41
COL25A1-209ENST00000622134 BRMS1Q9HCU9 246 aa12.46□□□□□ -0.41
COL25A1-209ENST00000622134 NFE2L2Q16236 605 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms