RNA–Protein interactions for RNA: ENST00000622044.1

PCDHGA11-203, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA11, Length 3,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-203ENST00000622044 CFAP65Q6ZU64 1925 aaKnown RBP13.91□□□□□ -0.18
PCDHGA11-203ENST00000622044 CDK19Q9BWU1 502 aa13.91□□□□□ -0.18
PCDHGA11-203ENST00000622044 MBIPQ9NS73 344 aa13.91□□□□□ -0.18
PCDHGA11-203ENST00000622044 ALDH1L2Q3SY69 923 aa13.9□□□□□ -0.18
PCDHGA11-203ENST00000622044 LARP6Q9BRS8 491 aaKnown RBP13.9□□□□□ -0.18
PCDHGA11-203ENST00000622044 EXOC6BQ9Y2D4 811 aa13.9□□□□□ -0.18
PCDHGA11-203ENST00000622044 ABCC11Q96J66 1382 aa13.9□□□□□ -0.18
PCDHGA11-203ENST00000622044 ZBTB7BO15156 539 aaPredicted RBP13.9□□□□□ -0.18
PCDHGA11-203ENST00000622044 OS9Q13438 667 aaPredicted RBP13.9□□□□□ -0.18
PCDHGA11-203ENST00000622044 FCHSD2O94868 740 aa13.9□□□□□ -0.18
PCDHGA11-203ENST00000622044 C8orf58Q8NAV2 365 aa13.9□□□□□ -0.18
PCDHGA11-203ENST00000622044 RTF1Q92541 710 aaKnown RBP13.9□□□□□ -0.18
PCDHGA11-203ENST00000622044 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.89□□□□□ -0.19
PCDHGA11-203ENST00000622044 LMOD3Q0VAK6 560 aa13.89□□□□□ -0.19
PCDHGA11-203ENST00000622044 NFE2L2Q16236 605 aa13.89□□□□□ -0.19
PCDHGA11-203ENST00000622044 ZNF830Q96NB3 372 aaPredicted RBP13.89□□□□□ -0.19
PCDHGA11-203ENST00000622044 NLRP1Q9C000 1473 aa13.89□□□□□ -0.19
PCDHGA11-203ENST00000622044 KDM5AP29375 1690 aaKnown RBP13.89□□□□□ -0.19
PCDHGA11-203ENST00000622044 DTNBO60941 627 aa13.89□□□□□ -0.19
PCDHGA11-203ENST00000622044 C14orf37Q86TY3 774 aa13.89□□□□□ -0.19
PCDHGA11-203ENST00000622044 KCNJ4P48050 445 aa13.89□□□□□ -0.19
PCDHGA11-203ENST00000622044 DRC7Q8IY82 874 aa13.89□□□□□ -0.19
PCDHGA11-203ENST00000622044 ZNF692Q9BU19 519 aaPredicted RBP13.89□□□□□ -0.19
PCDHGA11-203ENST00000622044 CCDC39Q9UFE4 941 aa13.89□□□□□ -0.19
PCDHGA11-203ENST00000622044 MAP4K4O95819 1239 aaPredicted RBP13.88□□□□□ -0.19
PCDHGA11-203ENST00000622044 SDSP20132 328 aa13.88□□□□□ -0.19
PCDHGA11-203ENST00000622044 COG3Q96JB2 828 aa13.88□□□□□ -0.19
PCDHGA11-203ENST00000622044 ZCCHC11Q5TAX3 1644 aaKnown RBP13.88□□□□□ -0.19
PCDHGA11-203ENST00000622044 F6X3S4 739 aa13.88□□□□□ -0.19
PCDHGA11-203ENST00000622044 VAMP4O75379 141 aa13.88□□□□□ -0.19
PCDHGA11-203ENST00000622044 SLC4A2P04920 1241 aa13.88□□□□□ -0.19
PCDHGA11-203ENST00000622044 FBXO31Q5XUX0 539 aaPredicted RBP13.88□□□□□ -0.19
PCDHGA11-203ENST00000622044 MCM10Q7L590 875 aa13.88□□□□□ -0.19
PCDHGA11-203ENST00000622044 WAPLQ7Z5K2 1190 aa13.88□□□□□ -0.19
PCDHGA11-203ENST00000622044 TAOK2Q9UL54 1235 aa13.88□□□□□ -0.19
PCDHGA11-203ENST00000622044 ERC2O15083 957 aa13.87□□□□□ -0.19
PCDHGA11-203ENST00000622044 A0A1W2PP64 1363 aa13.87□□□□□ -0.19
PCDHGA11-203ENST00000622044 CSPP1Q1MSJ5 1256 aa13.87□□□□□ -0.19
PCDHGA11-203ENST00000622044 TTC22Q5TAA0 569 aa13.87□□□□□ -0.19
PCDHGA11-203ENST00000622044 PLEKHM2Q8IWE5 1019 aa13.87□□□□□ -0.19
PCDHGA11-203ENST00000622044 MRPL50Q8N5N7 158 aaKnown RBP13.87□□□□□ -0.19
PCDHGA11-203ENST00000622044 TSPY26PQ9H489 355 aa13.87□□□□□ -0.19
PCDHGA11-203ENST00000622044 ANKRD36BQ8N2N9 1353 aa13.87□□□□□ -0.19
PCDHGA11-203ENST00000622044 FAM177BA6PVY3 158 aa13.87□□□□□ -0.19
PCDHGA11-203ENST00000622044 FIBPO43427 364 aa13.87□□□□□ -0.19
PCDHGA11-203ENST00000622044 OFD1O75665 1012 aa13.87□□□□□ -0.19
PCDHGA11-203ENST00000622044 GSPT1P15170 499 aaKnown RBP13.87□□□□□ -0.19
PCDHGA11-203ENST00000622044 CHAF1AQ13111 956 aaPredicted RBP13.87□□□□□ -0.19
PCDHGA11-203ENST00000622044 STK31Q9BXU1 1019 aa13.87□□□□□ -0.19
PCDHGA11-203ENST00000622044 SULT6B1Q6IMI4 303 aa13.86□□□□□ -0.19
PCDHGA11-203ENST00000622044 NME9Q86XW9 330 aa13.86□□□□□ -0.19
PCDHGA11-203ENST00000622044 ZRANB1Q9UGI0 708 aa13.86□□□□□ -0.19
PCDHGA11-203ENST00000622044 FKBP5Q13451 457 aaPredicted RBP13.85□□□□□ -0.19
PCDHGA11-203ENST00000622044 CWC22Q9HCG8 908 aaKnown RBP13.85□□□□□ -0.19
PCDHGA11-203ENST00000622044 SPC24Q8NBT2 197 aa13.85□□□□□ -0.19
PCDHGA11-203ENST00000622044 MEIS3Q99687 375 aa13.85□□□□□ -0.19
PCDHGA11-203ENST00000622044 USP25Q9UHP3 1055 aa13.85□□□□□ -0.19
PCDHGA11-203ENST00000622044 MYO5CQ9NQX4 1742 aa13.85□□□□□ -0.19
PCDHGA11-203ENST00000622044 GOLGA6L4A6NEF3 574 aa13.84□□□□□ -0.19
PCDHGA11-203ENST00000622044 PHF14O94880 888 aa13.84□□□□□ -0.19
PCDHGA11-203ENST00000622044 HAP1P54257 671 aaPredicted RBP13.84□□□□□ -0.19
PCDHGA11-203ENST00000622044 ZNF428Q96B54 188 aa13.84□□□□□ -0.19
PCDHGA11-203ENST00000622044 PHF23Q9BUL5 403 aaPredicted RBP13.84□□□□□ -0.19
PCDHGA11-203ENST00000622044 ZHX1Q9UKY1 873 aaPredicted RBP13.84□□□□□ -0.19
PCDHGA11-203ENST00000622044 MBD3O95983 291 aa13.84□□□□□ -0.19
PCDHGA11-203ENST00000622044 TSC1Q92574 1164 aa13.84□□□□□ -0.19
PCDHGA11-203ENST00000622044 IL1RAPL2Q9NP60 686 aa13.84□□□□□ -0.19
PCDHGA11-203ENST00000622044 IDI1Q13907 227 aa13.84□□□□□ -0.19
PCDHGA11-203ENST00000622044 PLEKHF1Q96S99 279 aa13.84□□□□□ -0.19
PCDHGA11-203ENST00000622044 CLASP1Q7Z460 1538 aa13.84□□□□□ -0.19
PCDHGA11-203ENST00000622044 A0A0U1RQG5 324 aaPredicted RBP13.83□□□□□ -0.19
PCDHGA11-203ENST00000622044 LTV1Q96GA3 475 aaPredicted RBP13.83□□□□□ -0.19
PCDHGA11-203ENST00000622044 KIF2CQ99661 725 aa13.83□□□□□ -0.19
PCDHGA11-203ENST00000622044 LMBRD1Q9NUN5 540 aa13.83□□□□□ -0.19
PCDHGA11-203ENST00000622044 CDC42BPBQ9Y5S2 1711 aa13.83□□□□□ -0.2
PCDHGA11-203ENST00000622044 ZNF518AQ6AHZ1 1483 aa13.83□□□□□ -0.2
PCDHGA11-203ENST00000622044 VPS37CA5D8V6 355 aaPredicted RBP13.83□□□□□ -0.2
PCDHGA11-203ENST00000622044 SIRT2Q8IXJ6 389 aa13.83□□□□□ -0.2
PCDHGA11-203ENST00000622044 IL16Q14005 1332 aa13.83□□□□□ -0.2
PCDHGA11-203ENST00000622044 USP26Q9BXU7 913 aa13.83□□□□□ -0.2
PCDHGA11-203ENST00000622044 TMEM63CQ9P1W3 806 aa13.83□□□□□ -0.2
PCDHGA11-203ENST00000622044 PPIP5K1Q6PFW1 1433 aa13.82□□□□□ -0.2
PCDHGA11-203ENST00000622044 TSPYL4Q9UJ04 414 aa13.82□□□□□ -0.2
PCDHGA11-203ENST00000622044 DDX54Q8TDD1 881 aaKnown RBP13.82□□□□□ -0.2
PCDHGA11-203ENST00000622044 TMX3Q96JJ7 454 aa13.82□□□□□ -0.2
PCDHGA11-203ENST00000622044 PREX2Q70Z35 1606 aa13.82□□□□□ -0.2
PCDHGA11-203ENST00000622044 C17orf53Q8N3J3 647 aaPredicted RBP13.82□□□□□ -0.2
PCDHGA11-203ENST00000622044 ZKSCAN5Q9Y2L8 839 aa13.82□□□□□ -0.2
PCDHGA11-203ENST00000622044 MADDQ8WXG6 1647 aa13.82□□□□□ -0.2
PCDHGA11-203ENST00000622044 IFT57Q9NWB7 429 aa13.81□□□□□ -0.2
PCDHGA11-203ENST00000622044 POLKQ9UBT6 870 aa13.81□□□□□ -0.2
PCDHGA11-203ENST00000622044 LRSAM1Q6UWE0 723 aa13.81□□□□□ -0.2
PCDHGA11-203ENST00000622044 IQGAP3Q86VI3 1631 aa13.81□□□□□ -0.2
PCDHGA11-203ENST00000622044 TTC12Q9H892 705 aaPredicted RBP13.81□□□□□ -0.2
PCDHGA11-203ENST00000622044 CBX1P83916 185 aa13.8□□□□□ -0.2
PCDHGA11-203ENST00000622044 GPT2Q8TD30 523 aa13.8□□□□□ -0.2
PCDHGA11-203ENST00000622044 NSFL1CQ9UNZ2 370 aaKnown RBP13.8□□□□□ -0.2
PCDHGA11-203ENST00000622044 ZMYM3Q14202 1370 aa13.8□□□□□ -0.2
PCDHGA11-203ENST00000622044 PPP1R9BQ96SB3 815 aa13.8□□□□□ -0.2
PCDHGA11-203ENST00000622044 MAP7D2Q96T17 732 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms