RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 MORC1Q86VD1 984 aa22.67■■□□□ 1.22
FAM3A-222ENST00000621967 SPINK5Q9NQ38 1064 aaPredicted RBP22.67■■□□□ 1.22
FAM3A-222ENST00000621967 ZRANB1Q9UGI0 708 aa22.67■■□□□ 1.22
FAM3A-222ENST00000621967 ARHGEF10O15013 1369 aa22.67■■□□□ 1.22
FAM3A-222ENST00000621967 OVOS2A0A0J9YW53 1432 aa22.66■■□□□ 1.22
FAM3A-222ENST00000621967 OVOS2Q6IE36 1432 aa22.66■■□□□ 1.22
FAM3A-222ENST00000621967 ZBTB47Q9UFB7 747 aaPredicted RBP22.66■■□□□ 1.22
FAM3A-222ENST00000621967 COL16A1Q07092 1604 aaPredicted RBP22.65■■□□□ 1.22
FAM3A-222ENST00000621967 CENPQQ7L2Z9 268 aaPredicted RBP22.65■■□□□ 1.22
FAM3A-222ENST00000621967 LRRC59Q96AG4 307 aaKnown RBP22.65■■□□□ 1.22
FAM3A-222ENST00000621967 USP31Q70CQ4 1352 aa22.65■■□□□ 1.22
FAM3A-222ENST00000621967 USP54Q70EL1 1684 aa22.63■■□□□ 1.21
FAM3A-222ENST00000621967 PLEKHG5O94827 1062 aa22.63■■□□□ 1.21
FAM3A-222ENST00000621967 TNNT2P45379 298 aaPredicted RBP22.63■■□□□ 1.21
FAM3A-222ENST00000621967 MARF1Q9Y4F3 1742 aaKnown RBP22.61■■□□□ 1.21
FAM3A-222ENST00000621967 VIRMAQ69YN4 1812 aaKnown RBP22.6■■□□□ 1.21
FAM3A-222ENST00000621967 SOX12O15370 315 aa22.59■■□□□ 1.21
FAM3A-222ENST00000621967 WWC1Q8IX03 1113 aa22.58■■□□□ 1.21
FAM3A-222ENST00000621967 MED1Q15648 1581 aaPredicted RBP22.58■■□□□ 1.2
FAM3A-222ENST00000621967 USP19O94966 1318 aa22.57■■□□□ 1.2
FAM3A-222ENST00000621967 SKAP1Q86WV1 359 aa22.57■■□□□ 1.2
FAM3A-222ENST00000621967 SLIT3O75094 1523 aa22.56■■□□□ 1.2
FAM3A-222ENST00000621967 HSPA1LP34931 641 aa22.56■■□□□ 1.2
FAM3A-222ENST00000621967 KCNH5Q8NCM2 988 aa22.56■■□□□ 1.2
FAM3A-222ENST00000621967 PHF23Q9BUL5 403 aaPredicted RBP22.56■■□□□ 1.2
FAM3A-222ENST00000621967 PNPLA6Q8IY17 1366 aa22.56■■□□□ 1.2
FAM3A-222ENST00000621967 NPM2Q86SE8 214 aaKnown RBP22.55■■□□□ 1.2
FAM3A-222ENST00000621967 RUNDC1Q96C34 613 aa22.55■■□□□ 1.2
FAM3A-222ENST00000621967 PHRF1Q9P1Y6 1649 aaKnown RBP22.55■■□□□ 1.2
FAM3A-222ENST00000621967 BCAR3O75815 825 aa22.55■■□□□ 1.2
FAM3A-222ENST00000621967 HAP1P54257 671 aaPredicted RBP22.55■■□□□ 1.2
FAM3A-222ENST00000621967 CABLES1Q8TDN4 633 aa22.55■■□□□ 1.2
FAM3A-222ENST00000621967 CRYBG1Q9Y4K1 1723 aa22.53■■□□□ 1.2
FAM3A-222ENST00000621967 AATKQ6ZMQ8 1374 aa22.53■■□□□ 1.2
FAM3A-222ENST00000621967 COL22A1Q8NFW1 1626 aaPredicted RBP22.53■■□□□ 1.2
FAM3A-222ENST00000621967 GCP02774 474 aa22.53■■□□□ 1.2
FAM3A-222ENST00000621967 JCADQ9P266 1359 aa22.52■■□□□ 1.2
FAM3A-222ENST00000621967 FBLN1P23142 703 aa22.52■■□□□ 1.2
FAM3A-222ENST00000621967 PDE3AQ14432 1141 aa22.52■■□□□ 1.2
FAM3A-222ENST00000621967 NCBP3Q53F19 620 aaKnown RBP22.52■■□□□ 1.2
FAM3A-222ENST00000621967 NFAT5O94916 1531 aa22.52■■□□□ 1.19
FAM3A-222ENST00000621967 ABCA3Q99758 1704 aa22.51■■□□□ 1.19
FAM3A-222ENST00000621967 FBXO41Q8TF61 875 aa22.51■■□□□ 1.19
FAM3A-222ENST00000621967 RRS1Q15050 365 aaKnown RBP22.51■■□□□ 1.19
FAM3A-222ENST00000621967 MTHFSP49914 203 aa22.5■■□□□ 1.19
FAM3A-222ENST00000621967 MAP2P11137 1827 aaKnown RBP22.5■■□□□ 1.19
FAM3A-222ENST00000621967 CCDC27Q2M243 656 aa22.49■■□□□ 1.19
FAM3A-222ENST00000621967 PPM1GO15355 546 aaPredicted RBP22.49■■□□□ 1.19
FAM3A-222ENST00000621967 NBR1Q14596 966 aa22.49■■□□□ 1.19
FAM3A-222ENST00000621967 CFAP53Q96M91 514 aa22.49■■□□□ 1.19
FAM3A-222ENST00000621967 ZBTB7CA1YPR0 619 aa22.48■■□□□ 1.19
FAM3A-222ENST00000621967 TCP11L2Q8N4U5 519 aa22.48■■□□□ 1.19
FAM3A-222ENST00000621967 EMILIN1Q9Y6C2 1016 aa22.48■■□□□ 1.19
FAM3A-222ENST00000621967 WDR63Q8IWG1 891 aa22.47■■□□□ 1.19
FAM3A-222ENST00000621967 POLKQ9UBT6 870 aa22.47■■□□□ 1.19
FAM3A-222ENST00000621967 LTN1O94822 1766 aa22.47■■□□□ 1.19
FAM3A-222ENST00000621967 ZC3H6P61129 1189 aaKnown RBP22.47■■□□□ 1.19
FAM3A-222ENST00000621967 MAP3K19Q56UN5 1328 aa22.47■■□□□ 1.19
FAM3A-222ENST00000621967 FAM161AQ3B820 660 aa22.45■■□□□ 1.18
FAM3A-222ENST00000621967 AMPHP49418 695 aa22.45■■□□□ 1.18
FAM3A-222ENST00000621967 C8orf34Q49A92 452 aa22.45■■□□□ 1.18
FAM3A-222ENST00000621967 DDRGK1Q96HY6 314 aa22.45■■□□□ 1.18
FAM3A-222ENST00000621967 COL3A1P02461 1466 aaPredicted RBP22.44■■□□□ 1.18
FAM3A-222ENST00000621967 ARHGEF25Q86VW2 580 aa22.43■■□□□ 1.18
FAM3A-222ENST00000621967 CDK12Q9NYV4 1490 aaPredicted RBP22.43■■□□□ 1.18
FAM3A-222ENST00000621967 KIAA0232Q92628 1395 aa22.43■■□□□ 1.18
FAM3A-222ENST00000621967 NUTM2BA6NNL0 878 aaPredicted RBP22.43■■□□□ 1.18
FAM3A-222ENST00000621967 NUTM2EB1AL46 878 aaPredicted RBP22.43■■□□□ 1.18
FAM3A-222ENST00000621967 DEKP35659 375 aaKnown RBP22.43■■□□□ 1.18
FAM3A-222ENST00000621967 NUTM2AQ8IVF1 878 aaPredicted RBP22.43■■□□□ 1.18
FAM3A-222ENST00000621967 CPDO75976 1380 aa22.42■■□□□ 1.18
FAM3A-222ENST00000621967 FLT4P35916 1363 aa22.42■■□□□ 1.18
FAM3A-222ENST00000621967 PRDM11Q9NQV5 511 aa22.42■■□□□ 1.18
FAM3A-222ENST00000621967 RRP7AQ9Y3A4 280 aaKnown RBP22.42■■□□□ 1.18
FAM3A-222ENST00000621967 RTL1A6NKG5 1358 aa22.42■■□□□ 1.18
FAM3A-222ENST00000621967 KIF24Q5T7B8 1368 aa22.42■■□□□ 1.18
FAM3A-222ENST00000621967 PEAK1Q9H792 1746 aa22.42■■□□□ 1.18
FAM3A-222ENST00000621967 SPATA31A6Q5VVP1 1343 aa22.42■■□□□ 1.18
FAM3A-222ENST00000621967 RARSP54136 660 aaKnown RBP22.41■■□□□ 1.18
FAM3A-222ENST00000621967 NEUROD2Q15784 382 aa22.4■■□□□ 1.18
FAM3A-222ENST00000621967 CLUAP1Q96AJ1 413 aa22.4■■□□□ 1.18
FAM3A-222ENST00000621967 BCL11AQ9H165 835 aa22.4■■□□□ 1.18
FAM3A-222ENST00000621967 ADAMTS2O95450 1211 aa22.39■■□□□ 1.17
FAM3A-222ENST00000621967 HOXC9P31274 260 aa22.39■■□□□ 1.17
FAM3A-222ENST00000621967 AAMPQ13685 434 aa22.39■■□□□ 1.17
FAM3A-222ENST00000621967 IGHDP01880 384 aa22.38■■□□□ 1.17
FAM3A-222ENST00000621967 CHRNA2Q15822 529 aa22.38■■□□□ 1.17
FAM3A-222ENST00000621967 RTL5Q5HYW3 569 aaPredicted RBP22.37■■□□□ 1.17
FAM3A-222ENST00000621967 IP6K1Q92551 441 aa22.37■■□□□ 1.17
FAM3A-222ENST00000621967 HSP90AB2PQ58FF8 381 aa22.37■■□□□ 1.17
FAM3A-222ENST00000621967 PANK1Q8TE04 598 aa22.37■■□□□ 1.17
FAM3A-222ENST00000621967 ABCC6O95255 1503 aa22.37■■□□□ 1.17
FAM3A-222ENST00000621967 CANXP27824 592 aaKnown RBP22.36■■□□□ 1.17
FAM3A-222ENST00000621967 COG6Q9Y2V7 657 aa22.36■■□□□ 1.17
FAM3A-222ENST00000621967 U2AF1L5P0DN76 240 aaPredicted RBP22.35■■□□□ 1.17
FAM3A-222ENST00000621967 RGS3P49796 1198 aa22.35■■□□□ 1.17
FAM3A-222ENST00000621967 U2AF1Q01081 240 aaKnown RBP eCLIP22.35■■□□□ 1.17
FAM3A-222ENST00000621967 DIAPH1O60610 1272 aaKnown RBP22.34■■□□□ 1.17
FAM3A-222ENST00000621967 MYH16Q9H6N6 1097 aa22.34■■□□□ 1.17
FAM3A-222ENST00000621967 COL14A1Q05707 1796 aaKnown RBP22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms