RNA–Protein interactions for RNA: ENST00000621936.1

PCCA-210, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

Gene PCCA, Length 1,850 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-210ENST00000621936 ZBTB40Q9NUA8 1239 aa14.86□□□□□ -0.03
PCCA-210ENST00000621936 NOB1Q9ULX3 412 aaKnown RBP14.86□□□□□ -0.03
PCCA-210ENST00000621936 NRKQ7Z2Y5 1582 aa14.86□□□□□ -0.03
PCCA-210ENST00000621936 ADAMTS13Q76LX8 1427 aa14.85□□□□□ -0.03
PCCA-210ENST00000621936 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.85□□□□□ -0.03
PCCA-210ENST00000621936 LAS1LQ9Y4W2 734 aaKnown RBP14.85□□□□□ -0.03
PCCA-210ENST00000621936 EID1Q9Y6B2 187 aa14.85□□□□□ -0.03
PCCA-210ENST00000621936 PTCH1Q13635 1447 aa14.85□□□□□ -0.03
PCCA-210ENST00000621936 BCL11AQ9H165 835 aa14.84□□□□□ -0.03
PCCA-210ENST00000621936 KIF24Q5T7B8 1368 aa14.84□□□□□ -0.03
PCCA-210ENST00000621936 TOPAZ1Q8N9V7 1692 aa14.83□□□□□ -0.03
PCCA-210ENST00000621936 PLEKHG3A1L390 1219 aa14.83□□□□□ -0.04
PCCA-210ENST00000621936 SLIT1O75093 1534 aa14.83□□□□□ -0.04
PCCA-210ENST00000621936 HAP1P54257 671 aaPredicted RBP14.82□□□□□ -0.04
PCCA-210ENST00000621936 PPP4R3CPQ6ZMV5 832 aa14.82□□□□□ -0.04
PCCA-210ENST00000621936 TBC1D32Q96NH3 1257 aa14.82□□□□□ -0.04
PCCA-210ENST00000621936 ARHGAP23Q9P227 1491 aa14.82□□□□□ -0.04
PCCA-210ENST00000621936 VAMP4O75379 141 aa14.82□□□□□ -0.04
PCCA-210ENST00000621936 NFKBIBQ15653 356 aa14.82□□□□□ -0.04
PCCA-210ENST00000621936 ITPRIPQ8IWB1 547 aa14.82□□□□□ -0.04
PCCA-210ENST00000621936 NME9Q86XW9 330 aa14.81□□□□□ -0.04
PCCA-210ENST00000621936 TMEM57Q8N5G2 664 aa14.81□□□□□ -0.04
PCCA-210ENST00000621936 MRPL50Q8N5N7 158 aaKnown RBP14.81□□□□□ -0.04
PCCA-210ENST00000621936 CFAP44Q96MT7 982 aa14.81□□□□□ -0.04
PCCA-210ENST00000621936 ROBO2Q9HCK4 1378 aa14.81□□□□□ -0.04
PCCA-210ENST00000621936 DIP2AQ14689 1571 aa14.8□□□□□ -0.04
PCCA-210ENST00000621936 TBX22Q9Y458 520 aa14.8□□□□□ -0.04
PCCA-210ENST00000621936 EMILIN1Q9Y6C2 1016 aa14.8□□□□□ -0.04
PCCA-210ENST00000621936 LTKP29376 864 aa14.79□□□□□ -0.04
PCCA-210ENST00000621936 THEMISQ8N1K5 641 aaPredicted RBP14.79□□□□□ -0.04
PCCA-210ENST00000621936 PHACTR3Q96KR7 559 aa14.79□□□□□ -0.04
PCCA-210ENST00000621936 NALCNQ8IZF0 1738 aa14.79□□□□□ -0.04
PCCA-210ENST00000621936 USP31Q70CQ4 1352 aa14.79□□□□□ -0.04
PCCA-210ENST00000621936 OVOS2A0A0J9YW53 1432 aa14.78□□□□□ -0.04
PCCA-210ENST00000621936 OVOS2Q6IE36 1432 aa14.78□□□□□ -0.04
PCCA-210ENST00000621936 SEC24BO95487 1268 aa14.78□□□□□ -0.04
PCCA-210ENST00000621936 NUCB1Q02818 461 aa14.78□□□□□ -0.04
PCCA-210ENST00000621936 GCC1Q96CN9 775 aa14.78□□□□□ -0.04
PCCA-210ENST00000621936 FER1L4A9Z1Z3 1794 aa14.78□□□□□ -0.04
PCCA-210ENST00000621936 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.78□□□□□ -0.04
PCCA-210ENST00000621936 EIF5BO60841 1220 aaKnown RBP14.78□□□□□ -0.04
PCCA-210ENST00000621936 API5Q9BZZ5 524 aaKnown RBP14.78□□□□□ -0.04
PCCA-210ENST00000621936 TTC21BQ7Z4L5 1316 aa14.78□□□□□ -0.04
PCCA-210ENST00000621936 PRR36Q9H6K5 1346 aa14.78□□□□□ -0.04
PCCA-210ENST00000621936 ABCC4O15439 1325 aa14.77□□□□□ -0.05
PCCA-210ENST00000621936 DLG5Q8TDM6 1919 aa14.77□□□□□ -0.05
PCCA-210ENST00000621936 ZBTB7BO15156 539 aaPredicted RBP14.76□□□□□ -0.05
PCCA-210ENST00000621936 TTC21AQ8NDW8 1320 aa14.76□□□□□ -0.05
PCCA-210ENST00000621936 SSH2Q76I76 1423 aa14.76□□□□□ -0.05
PCCA-210ENST00000621936 SLC4A3P48751 1232 aa14.76□□□□□ -0.05
PCCA-210ENST00000621936 USP6P35125 1406 aa14.75□□□□□ -0.05
PCCA-210ENST00000621936 HMOX1P09601 288 aa14.75□□□□□ -0.05
PCCA-210ENST00000621936 MBIPQ9NS73 344 aa14.75□□□□□ -0.05
PCCA-210ENST00000621936 KIAA0232Q92628 1395 aa14.75□□□□□ -0.05
PCCA-210ENST00000621936 RGPD1P0DJD0 1748 aa14.75□□□□□ -0.05
PCCA-210ENST00000621936 RIMS1Q86UR5 1692 aaKnown RBP14.74□□□□□ -0.05
PCCA-210ENST00000621936 PTPRUQ92729 1446 aa14.74□□□□□ -0.05
PCCA-210ENST00000621936 CEBPAP49715 358 aaPredicted RBP14.74□□□□□ -0.05
PCCA-210ENST00000621936 GSE1Q14687 1217 aa14.74□□□□□ -0.05
PCCA-210ENST00000621936 TWISTNBQ3B726 338 aaPredicted RBP14.74□□□□□ -0.05
PCCA-210ENST00000621936 ACEP12821 1306 aa14.73□□□□□ -0.05
PCCA-210ENST00000621936 AMOTL2Q9Y2J4 779 aa14.73□□□□□ -0.05
PCCA-210ENST00000621936 CHD1LQ86WJ1 897 aa14.72□□□□□ -0.05
PCCA-210ENST00000621936 ZRANB1Q9UGI0 708 aa14.72□□□□□ -0.05
PCCA-210ENST00000621936 ARHGEF10O15013 1369 aa14.72□□□□□ -0.05
PCCA-210ENST00000621936 FBLN1P23142 703 aa14.72□□□□□ -0.05
PCCA-210ENST00000621936 BMP2KLQ5H9B9 411 aa14.72□□□□□ -0.05
PCCA-210ENST00000621936 NCKAP5LQ9HCH0 1330 aa14.71□□□□□ -0.05
PCCA-210ENST00000621936 EIF4A2Q14240 407 aaKnown RBP14.71□□□□□ -0.05
PCCA-210ENST00000621936 SLC26A8Q96RN1 970 aa14.71□□□□□ -0.05
PCCA-210ENST00000621936 C22orf23Q9BZE7 217 aa14.71□□□□□ -0.05
PCCA-210ENST00000621936 ANTXR1Q9H6X2 564 aa14.71□□□□□ -0.05
PCCA-210ENST00000621936 CHL1O00533 1208 aa14.7□□□□□ -0.06
PCCA-210ENST00000621936 RBM25P49756 843 aaKnown RBP14.69□□□□□ -0.06
PCCA-210ENST00000621936 RRS1Q15050 365 aaKnown RBP14.69□□□□□ -0.06
PCCA-210ENST00000621936 INTS3Q68E01 1043 aaKnown RBP14.69□□□□□ -0.06
PCCA-210ENST00000621936 TSPYL6Q8N831 410 aa14.69□□□□□ -0.06
PCCA-210ENST00000621936 ANKARQ7Z5J8 1434 aa14.69□□□□□ -0.06
PCCA-210ENST00000621936 TBC1D2Q9BYX2 928 aa14.69□□□□□ -0.06
PCCA-210ENST00000621936 USP54Q70EL1 1684 aa14.68□□□□□ -0.06
PCCA-210ENST00000621936 XRN1Q8IZH2 1706 aaKnown RBP14.68□□□□□ -0.06
PCCA-210ENST00000621936 PIAS4Q8N2W9 510 aaPredicted RBP14.68□□□□□ -0.06
PCCA-210ENST00000621936 C8orf58Q8NAV2 365 aa14.68□□□□□ -0.06
PCCA-210ENST00000621936 PTPRCP08575 1304 aa14.68□□□□□ -0.06
PCCA-210ENST00000621936 PEAK1Q9H792 1746 aa14.68□□□□□ -0.06
PCCA-210ENST00000621936 SNX21Q969T3 373 aa14.67□□□□□ -0.06
PCCA-210ENST00000621936 THUMPD2Q9BTF0 503 aaKnown RBP14.67□□□□□ -0.06
PCCA-210ENST00000621936 SBNO1A3KN83 1393 aa14.67□□□□□ -0.06
PCCA-210ENST00000621936 HTATSF1O43719 755 aaKnown RBP14.67□□□□□ -0.06
PCCA-210ENST00000621936 SULT6B1Q6IMI4 303 aa14.66□□□□□ -0.06
PCCA-210ENST00000621936 KDRP35968 1356 aa14.66□□□□□ -0.06
PCCA-210ENST00000621936 SOS1Q07889 1333 aaPredicted RBP14.66□□□□□ -0.06
PCCA-210ENST00000621936 FMN2Q9NZ56 1722 aa14.66□□□□□ -0.06
PCCA-210ENST00000621936 FRAT2O75474 233 aaPredicted RBP14.65□□□□□ -0.06
PCCA-210ENST00000621936 FLT4P35916 1363 aa14.65□□□□□ -0.06
PCCA-210ENST00000621936 CRB1P82279 1406 aa14.65□□□□□ -0.06
PCCA-210ENST00000621936 CEP170BQ9Y4F5 1589 aaPredicted RBP14.65□□□□□ -0.06
PCCA-210ENST00000621936 RPAP2Q8IXW5 612 aaPredicted RBP14.65□□□□□ -0.06
PCCA-210ENST00000621936 NGDNQ8NEJ9 315 aaKnown RBP14.63□□□□□ -0.07
PCCA-210ENST00000621936 LNPKQ9C0E8 428 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms