RNA–Protein interactions for RNA: ENST00000621218.4

PLP1-223, Transcript of proteolipid protein 1, human

APPRIS P1 TSL 1 (best) BASIC

Gene PLP1, Length 3,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLP1-223	ENST00000621218	PLEKHM2	Q8IWE5	1019 aa		11.33	□□□□□ -0.6
PLP1-223	ENST00000621218	INO80	Q9ULG1	1556 aa	Predicted RBP	11.33	□□□□□ -0.6
PLP1-223	ENST00000621218	CHD1	O14646	1710 aa		11.33	□□□□□ -0.6
PLP1-223	ENST00000621218	ZSCAN20	P17040	1043 aa	Predicted RBP	11.33	□□□□□ -0.6
PLP1-223	ENST00000621218	EFCAB2	Q5VUJ9	269 aa		11.33	□□□□□ -0.6
PLP1-223	ENST00000621218	MTERF4	Q7Z6M4	381 aa	Known RBP	11.33	□□□□□ -0.6
PLP1-223	ENST00000621218	C16orf71	Q8IYS4	520 aa	Predicted RBP	11.33	□□□□□ -0.6
PLP1-223	ENST00000621218	NEURL4	Q96JN8	1562 aa		11.33	□□□□□ -0.6
PLP1-223	ENST00000621218		A0A0U1RQG5	324 aa	Predicted RBP	11.33	□□□□□ -0.6
PLP1-223	ENST00000621218	KIF1B	O60333	1816 aa		11.33	□□□□□ -0.6
PLP1-223	ENST00000621218	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.32	□□□□□ -0.6
PLP1-223	ENST00000621218	MPND	Q8N594	471 aa		11.32	□□□□□ -0.6
PLP1-223	ENST00000621218	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	11.32	□□□□□ -0.6
PLP1-223	ENST00000621218	CCDC94	Q9BW85	323 aa	Predicted RBP	11.32	□□□□□ -0.6
PLP1-223	ENST00000621218	CCDC39	Q9UFE4	941 aa		11.32	□□□□□ -0.6
PLP1-223	ENST00000621218	COL3A1	P02461	1466 aa	Predicted RBP	11.32	□□□□□ -0.6
PLP1-223	ENST00000621218	ATAD2	Q6PL18	1390 aa		11.32	□□□□□ -0.6
PLP1-223	ENST00000621218	ZNF710	Q8N1W2	664 aa		11.32	□□□□□ -0.6
PLP1-223	ENST00000621218	KIF3B	O15066	747 aa		11.31	□□□□□ -0.6
PLP1-223	ENST00000621218	TSPYL6	Q8N831	410 aa		11.31	□□□□□ -0.6
PLP1-223	ENST00000621218	GGNBP2	Q9H3C7	697 aa		11.31	□□□□□ -0.6
PLP1-223	ENST00000621218	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	11.31	□□□□□ -0.6
PLP1-223	ENST00000621218	VWDE	Q8N2E2	1590 aa		11.31	□□□□□ -0.6
PLP1-223	ENST00000621218	ZFYVE16	Q7Z3T8	1539 aa		11.31	□□□□□ -0.6
PLP1-223	ENST00000621218	BRPF1	P55201	1214 aa	Predicted RBP	11.3	□□□□□ -0.6
PLP1-223	ENST00000621218	DMTN	Q08495	405 aa		11.3	□□□□□ -0.6
PLP1-223	ENST00000621218	OTUD7A	Q8TE49	926 aa	Predicted RBP	11.3	□□□□□ -0.6
PLP1-223	ENST00000621218	CWC22	Q9HCG8	908 aa	Known RBP	11.3	□□□□□ -0.6
PLP1-223	ENST00000621218	ANKRD36B	Q8N2N9	1353 aa		11.3	□□□□□ -0.6
PLP1-223	ENST00000621218	MRPL50	Q8N5N7	158 aa	Known RBP	11.3	□□□□□ -0.6
PLP1-223	ENST00000621218	CABP2	Q9NPB3	220 aa		11.3	□□□□□ -0.6
PLP1-223	ENST00000621218	SETBP1	Q9Y6X0	1596 aa		11.3	□□□□□ -0.6
PLP1-223	ENST00000621218	ELL2	O00472	640 aa	Predicted RBP	11.3	□□□□□ -0.6
PLP1-223	ENST00000621218	VAMP4	O75379	141 aa		11.3	□□□□□ -0.6
PLP1-223	ENST00000621218	MYRIP	Q8NFW9	859 aa		11.3	□□□□□ -0.6
PLP1-223	ENST00000621218	ZNF830	Q96NB3	372 aa	Predicted RBP	11.3	□□□□□ -0.6
PLP1-223	ENST00000621218	C14orf93	Q9H972	538 aa	Known RBP	11.3	□□□□□ -0.6
PLP1-223	ENST00000621218	ADGRB1	O14514	1584 aa		11.29	□□□□□ -0.6
PLP1-223	ENST00000621218	FAM177B	A6PVY3	158 aa		11.29	□□□□□ -0.6
PLP1-223	ENST00000621218	TTC22	Q5TAA0	569 aa		11.29	□□□□□ -0.6
PLP1-223	ENST00000621218	PIK3R4	Q99570	1358 aa		11.29	□□□□□ -0.6
PLP1-223	ENST00000621218	CHGA	P10645	457 aa	Known RBP	11.29	□□□□□ -0.6
PLP1-223	ENST00000621218	THUMPD2	Q9BTF0	503 aa	Known RBP	11.29	□□□□□ -0.6
PLP1-223	ENST00000621218	KNDC1	Q76NI1	1749 aa		11.29	□□□□□ -0.6
PLP1-223	ENST00000621218	NSD2	O96028	1365 aa		11.28	□□□□□ -0.6
PLP1-223	ENST00000621218	C17orf53	Q8N3J3	647 aa	Predicted RBP	11.28	□□□□□ -0.6
PLP1-223	ENST00000621218	TULP4	Q9NRJ4	1543 aa		11.28	□□□□□ -0.6
PLP1-223	ENST00000621218	KIAA2012	Q0VF49	1180 aa		11.27	□□□□□ -0.6
PLP1-223	ENST00000621218	UTP14C	Q5TAP6	766 aa	Known RBP	11.27	□□□□□ -0.6
PLP1-223	ENST00000621218	PTCH1	Q13635	1447 aa		11.27	□□□□□ -0.6
PLP1-223	ENST00000621218	ABCC4	O15439	1325 aa		11.27	□□□□□ -0.61
PLP1-223	ENST00000621218	CBX1	P83916	185 aa		11.27	□□□□□ -0.61
PLP1-223	ENST00000621218		A0A1W2PP64	1363 aa		11.27	□□□□□ -0.61
PLP1-223	ENST00000621218	MROH1	Q8NDA8	1641 aa		11.27	□□□□□ -0.61
PLP1-223	ENST00000621218	PTMA	P06454	111 aa	Known RBP	11.27	□□□□□ -0.61
PLP1-223	ENST00000621218	SDS	P20132	328 aa		11.27	□□□□□ -0.61
PLP1-223	ENST00000621218	ATP2B3	Q16720	1220 aa		11.27	□□□□□ -0.61
PLP1-223	ENST00000621218	ARHGAP45	Q92619	1136 aa		11.27	□□□□□ -0.61
PLP1-223	ENST00000621218	ST18	O60284	1047 aa		11.26	□□□□□ -0.61
PLP1-223	ENST00000621218	DNTTIP2	Q5QJE6	756 aa	Known RBP	11.26	□□□□□ -0.61
PLP1-223	ENST00000621218	DCTPP1	Q9H773	170 aa		11.26	□□□□□ -0.61
PLP1-223	ENST00000621218	RERE	Q9P2R6	1566 aa		11.26	□□□□□ -0.61
PLP1-223	ENST00000621218	SAFB2	Q14151	953 aa	Known RBP eCLIP	11.26	□□□□□ -0.61
PLP1-223	ENST00000621218	CFAP65	Q6ZU64	1925 aa	Known RBP	11.26	□□□□□ -0.61
PLP1-223	ENST00000621218	FYB1	O15117	783 aa		11.25	□□□□□ -0.61
PLP1-223	ENST00000621218	INTS3	Q68E01	1043 aa	Known RBP	11.25	□□□□□ -0.61
PLP1-223	ENST00000621218	EVC2	Q86UK5	1308 aa		11.25	□□□□□ -0.61
PLP1-223	ENST00000621218	FBLN1	P23142	703 aa		11.25	□□□□□ -0.61
PLP1-223	ENST00000621218	PHACTR3	Q96KR7	559 aa		11.25	□□□□□ -0.61
PLP1-223	ENST00000621218	TSPY26P	Q9H489	355 aa		11.25	□□□□□ -0.61
PLP1-223	ENST00000621218	TTC12	Q9H892	705 aa	Predicted RBP	11.25	□□□□□ -0.61
PLP1-223	ENST00000621218	SMARCA5	O60264	1052 aa	Predicted RBP	11.25	□□□□□ -0.61
PLP1-223	ENST00000621218	DIAPH1	O60610	1272 aa	Known RBP	11.25	□□□□□ -0.61
PLP1-223	ENST00000621218	NOLC1	Q14978	699 aa	Known RBP eCLIP	11.25	□□□□□ -0.61
PLP1-223	ENST00000621218	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	11.25	□□□□□ -0.61
PLP1-223	ENST00000621218	FOXD4L3	Q6VB84	417 aa	Predicted RBP	11.25	□□□□□ -0.61
PLP1-223	ENST00000621218	GADD45B	O75293	160 aa	Predicted RBP	11.24	□□□□□ -0.61
PLP1-223	ENST00000621218	GTF2F1	P35269	517 aa	Known RBP eCLIP	11.24	□□□□□ -0.61
PLP1-223	ENST00000621218	NUTM2D	Q5VT03	806 aa	Predicted RBP	11.24	□□□□□ -0.61
PLP1-223	ENST00000621218	PIBF1	Q8WXW3	757 aa		11.24	□□□□□ -0.61
PLP1-223	ENST00000621218	ZNF428	Q96B54	188 aa		11.24	□□□□□ -0.61
PLP1-223	ENST00000621218	TMX3	Q96JJ7	454 aa		11.24	□□□□□ -0.61
PLP1-223	ENST00000621218	GDPD2	Q9HCC8	539 aa		11.24	□□□□□ -0.61
PLP1-223	ENST00000621218	ERCC6L2	Q5T890	1561 aa		11.24	□□□□□ -0.61
PLP1-223	ENST00000621218	ADGRB3	O60242	1522 aa		11.24	□□□□□ -0.61
PLP1-223	ENST00000621218	BRD1	O95696	1058 aa		11.24	□□□□□ -0.61
PLP1-223	ENST00000621218	MBD3	O95983	291 aa		11.24	□□□□□ -0.61
PLP1-223	ENST00000621218	PRKAR2B	P31323	418 aa		11.24	□□□□□ -0.61
PLP1-223	ENST00000621218	CHMP4B	Q9H444	224 aa	Known RBP	11.24	□□□□□ -0.61
PLP1-223	ENST00000621218	LRRC7	Q96NW7	1537 aa		11.23	□□□□□ -0.61
PLP1-223	ENST00000621218	APBB1	O00213	710 aa		11.23	□□□□□ -0.61
PLP1-223	ENST00000621218	PPP4R3B	Q5MIZ7	849 aa		11.23	□□□□□ -0.61
PLP1-223	ENST00000621218	PPL	O60437	1756 aa		11.23	□□□□□ -0.61
PLP1-223	ENST00000621218	TCHH	Q07283	1943 aa		11.23	□□□□□ -0.61
PLP1-223	ENST00000621218	EFCAB6	Q5THR3	1501 aa		11.23	□□□□□ -0.61
PLP1-223	ENST00000621218	PRIMPOL	Q96LW4	560 aa		11.23	□□□□□ -0.61
PLP1-223	ENST00000621218	USP25	Q9UHP3	1055 aa		11.23	□□□□□ -0.61
PLP1-223	ENST00000621218	NEK4	P51957	841 aa		11.22	□□□□□ -0.61
PLP1-223	ENST00000621218	HMGN5	P82970	282 aa	Known RBP	11.22	□□□□□ -0.61
PLP1-223	ENST00000621218	C8orf58	Q8NAV2	365 aa		11.22	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms