RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 TBC1D32Q96NH3 1257 aa10.23□□□□□ -0.77
PTPDC1-204ENST00000620992 DDX19BQ9UMR2 479 aa10.23□□□□□ -0.77
PTPDC1-204ENST00000620992 ABCA9Q8IUA7 1624 aa10.23□□□□□ -0.77
PTPDC1-204ENST00000620992 ATF7IPQ6VMQ6 1270 aa10.23□□□□□ -0.77
PTPDC1-204ENST00000620992 C22orf23Q9BZE7 217 aa10.22□□□□□ -0.77
PTPDC1-204ENST00000620992 TMEM57Q8N5G2 664 aa10.22□□□□□ -0.77
PTPDC1-204ENST00000620992 A0A1W2PP64 1363 aa10.22□□□□□ -0.77
PTPDC1-204ENST00000620992 LNPKQ9C0E8 428 aa10.22□□□□□ -0.77
PTPDC1-204ENST00000620992 ZC3H6P61129 1189 aaKnown RBP10.21□□□□□ -0.77
PTPDC1-204ENST00000620992 QRICH2Q9H0J4 1663 aa10.21□□□□□ -0.77
PTPDC1-204ENST00000620992 MTMR7Q9Y216 660 aa10.21□□□□□ -0.77
PTPDC1-204ENST00000620992 ADGRB3O60242 1522 aa10.21□□□□□ -0.78
PTPDC1-204ENST00000620992 FYB1O15117 783 aa10.21□□□□□ -0.78
PTPDC1-204ENST00000620992 CABP1Q9NZU7 370 aa10.21□□□□□ -0.78
PTPDC1-204ENST00000620992 KIDINS220Q9ULH0 1771 aa10.21□□□□□ -0.78
PTPDC1-204ENST00000620992 ARID3AQ99856 593 aa10.21□□□□□ -0.78
PTPDC1-204ENST00000620992 NRXN1Q9ULB1 1477 aa10.2□□□□□ -0.78
PTPDC1-204ENST00000620992 RBM42Q9BTD8 480 aaKnown RBP10.2□□□□□ -0.78
PTPDC1-204ENST00000620992 TRIM35Q9UPQ4 493 aa10.2□□□□□ -0.78
PTPDC1-204ENST00000620992 HMMRO75330 724 aa10.2□□□□□ -0.78
PTPDC1-204ENST00000620992 APPP05067 770 aa10.2□□□□□ -0.78
PTPDC1-204ENST00000620992 RASSF8Q8NHQ8 419 aa10.2□□□□□ -0.78
PTPDC1-204ENST00000620992 NSD2O96028 1365 aa10.2□□□□□ -0.78
PTPDC1-204ENST00000620992 PRKAR2BP31323 418 aa10.19□□□□□ -0.78
PTPDC1-204ENST00000620992 DRC7Q8IY82 874 aa10.19□□□□□ -0.78
PTPDC1-204ENST00000620992 THUMPD2Q9BTF0 503 aaKnown RBP10.19□□□□□ -0.78
PTPDC1-204ENST00000620992 CDK19Q9BWU1 502 aa10.19□□□□□ -0.78
PTPDC1-204ENST00000620992 IQSEC2Q5JU85 1478 aa10.19□□□□□ -0.78
PTPDC1-204ENST00000620992 KDM4AO75164 1064 aa10.19□□□□□ -0.78
PTPDC1-204ENST00000620992 C1orf115Q9H7X2 142 aa10.19□□□□□ -0.78
PTPDC1-204ENST00000620992 SLC52A1Q9NWF4 448 aa10.19□□□□□ -0.78
PTPDC1-204ENST00000620992 CT47B1P0C2W7 299 aaPredicted RBP10.19□□□□□ -0.78
PTPDC1-204ENST00000620992 POGZQ7Z3K3 1410 aa10.18□□□□□ -0.78
PTPDC1-204ENST00000620992 TSPYL4Q9UJ04 414 aa10.18□□□□□ -0.78
PTPDC1-204ENST00000620992 SETBP1Q9Y6X0 1596 aa10.18□□□□□ -0.78
PTPDC1-204ENST00000620992 NEXNQ0ZGT2 675 aa10.18□□□□□ -0.78
PTPDC1-204ENST00000620992 FBXO31Q5XUX0 539 aaPredicted RBP10.18□□□□□ -0.78
PTPDC1-204ENST00000620992 CHMP4CQ96CF2 233 aa10.18□□□□□ -0.78
PTPDC1-204ENST00000620992 KIF16BQ96L93 1317 aa10.18□□□□□ -0.78
PTPDC1-204ENST00000620992 LMOD3Q0VAK6 560 aa10.18□□□□□ -0.78
PTPDC1-204ENST00000620992 PLEKHF1Q96S99 279 aa10.18□□□□□ -0.78
PTPDC1-204ENST00000620992 ADGRB1O14514 1584 aa10.18□□□□□ -0.78
PTPDC1-204ENST00000620992 SHPRHQ149N8 1683 aa10.18□□□□□ -0.78
PTPDC1-204ENST00000620992 NEURL4Q96JN8 1562 aa10.17□□□□□ -0.78
PTPDC1-204ENST00000620992 VPS37DQ86XT2 251 aa10.17□□□□□ -0.78
PTPDC1-204ENST00000620992 NEUROD6Q96NK8 337 aa10.17□□□□□ -0.78
PTPDC1-204ENST00000620992 ATAD2Q6PL18 1390 aa10.17□□□□□ -0.78
PTPDC1-204ENST00000620992 GLI2P10070 1586 aa10.16□□□□□ -0.78
PTPDC1-204ENST00000620992 WAPLQ7Z5K2 1190 aa10.16□□□□□ -0.78
PTPDC1-204ENST00000620992 PUS7Q96PZ0 661 aaKnown RBP10.16□□□□□ -0.78
PTPDC1-204ENST00000620992 MYO3AQ8NEV4 1616 aa10.16□□□□□ -0.78
PTPDC1-204ENST00000620992 LMTK2Q8IWU2 1503 aa10.16□□□□□ -0.78
PTPDC1-204ENST00000620992 TULP4Q9NRJ4 1543 aa10.16□□□□□ -0.78
PTPDC1-204ENST00000620992 ABCC11Q96J66 1382 aa10.16□□□□□ -0.78
PTPDC1-204ENST00000620992 HDAC1Q13547 482 aaPredicted RBP10.16□□□□□ -0.78
PTPDC1-204ENST00000620992 KAT6BQ8WYB5 2073 aa10.16□□□□□ -0.78
PTPDC1-204ENST00000620992 IFT172Q9UG01 1749 aa10.16□□□□□ -0.78
PTPDC1-204ENST00000620992 FOSBP53539 338 aa10.16□□□□□ -0.78
PTPDC1-204ENST00000620992 ADAMTS2O95450 1211 aa10.15□□□□□ -0.78
PTPDC1-204ENST00000620992 L1TD1Q5T7N2 865 aaKnown RBP10.15□□□□□ -0.78
PTPDC1-204ENST00000620992 ABCC3O15438 1527 aa10.15□□□□□ -0.78
PTPDC1-204ENST00000620992 MARCH6O60337 910 aa10.15□□□□□ -0.78
PTPDC1-204ENST00000620992 CCDC85AQ96PX6 553 aaPredicted RBP10.15□□□□□ -0.78
PTPDC1-204ENST00000620992 ANTXR1Q9H6X2 564 aa10.15□□□□□ -0.78
PTPDC1-204ENST00000620992 CHMP5Q9NZZ3 219 aa10.15□□□□□ -0.78
PTPDC1-204ENST00000620992 PPLO60437 1756 aa10.15□□□□□ -0.79
PTPDC1-204ENST00000620992 RRS1Q15050 365 aaKnown RBP10.15□□□□□ -0.79
PTPDC1-204ENST00000620992 GPATCH3Q96I76 525 aa10.15□□□□□ -0.79
PTPDC1-204ENST00000620992 NAP1L5Q96NT1 182 aaPredicted RBP10.15□□□□□ -0.79
PTPDC1-204ENST00000620992 ZBTB40Q9NUA8 1239 aa10.15□□□□□ -0.79
PTPDC1-204ENST00000620992 DHX16O60231 1041 aaKnown RBP10.14□□□□□ -0.79
PTPDC1-204ENST00000620992 MCM4P33991 863 aa10.14□□□□□ -0.79
PTPDC1-204ENST00000620992 TOM1L2Q6ZVM7 507 aa10.14□□□□□ -0.79
PTPDC1-204ENST00000620992 PRDM11Q9NQV5 511 aa10.14□□□□□ -0.79
PTPDC1-204ENST00000620992 GOLGA6L3A6NEY3 463 aa10.14□□□□□ -0.79
PTPDC1-204ENST00000620992 RIC3Q7Z5B4 369 aa10.14□□□□□ -0.79
PTPDC1-204ENST00000620992 NLRP1Q9C000 1473 aa10.14□□□□□ -0.79
PTPDC1-204ENST00000620992 MLH3Q9UHC1 1453 aa10.14□□□□□ -0.79
PTPDC1-204ENST00000620992 FCHSD2O94868 740 aa10.14□□□□□ -0.79
PTPDC1-204ENST00000620992 CHD1LQ86WJ1 897 aa10.14□□□□□ -0.79
PTPDC1-204ENST00000620992 FOXO3O43524 673 aa10.13□□□□□ -0.79
PTPDC1-204ENST00000620992 SMC5Q8IY18 1101 aa10.13□□□□□ -0.79
PTPDC1-204ENST00000620992 THEMISQ8N1K5 641 aaPredicted RBP10.13□□□□□ -0.79
PTPDC1-204ENST00000620992 PHACTR3Q96KR7 559 aa10.13□□□□□ -0.79
PTPDC1-204ENST00000620992 EMILIN1Q9Y6C2 1016 aa10.13□□□□□ -0.79
PTPDC1-204ENST00000620992 STK11IPQ8N1F8 1099 aa10.13□□□□□ -0.79
PTPDC1-204ENST00000620992 SULT6B1Q6IMI4 303 aa10.13□□□□□ -0.79
PTPDC1-204ENST00000620992 IL16Q14005 1332 aa10.13□□□□□ -0.79
PTPDC1-204ENST00000620992 TSPYL6Q8N831 410 aa10.13□□□□□ -0.79
PTPDC1-204ENST00000620992 HECW2Q9P2P5 1572 aa10.12□□□□□ -0.79
PTPDC1-204ENST00000620992 FRMPD1Q5SYB0 1578 aa10.12□□□□□ -0.79
PTPDC1-204ENST00000620992 TRAK2O60296 914 aa10.12□□□□□ -0.79
PTPDC1-204ENST00000620992 POLKQ9UBT6 870 aa10.12□□□□□ -0.79
PTPDC1-204ENST00000620992 PES1O00541 588 aaKnown RBP10.12□□□□□ -0.79
PTPDC1-204ENST00000620992 MCTP1Q6DN14 999 aa10.12□□□□□ -0.79
PTPDC1-204ENST00000620992 YTHDC2Q9H6S0 1430 aaKnown RBP10.11□□□□□ -0.79
PTPDC1-204ENST00000620992 PTCD1O75127 700 aaKnown RBP10.11□□□□□ -0.79
PTPDC1-204ENST00000620992 NUCB1Q02818 461 aa10.11□□□□□ -0.79
PTPDC1-204ENST00000620992 WWC3Q9ULE0 1092 aa10.11□□□□□ -0.79
PTPDC1-204ENST00000620992 NFE2L2Q16236 605 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms