RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 CTR9Q6PD62 1173 aa8.49□□□□□ -1.05
COLCA1-205ENST00000620864 CGNQ9P2M7 1197 aaKnown RBP8.49□□□□□ -1.05
COLCA1-205ENST00000620864 CEBPAP49715 358 aaPredicted RBP8.49□□□□□ -1.05
COLCA1-205ENST00000620864 PPFIBP1Q86W92 1011 aa8.49□□□□□ -1.05
COLCA1-205ENST00000620864 RAPGEF4Q8WZA2 1011 aa8.49□□□□□ -1.05
COLCA1-205ENST00000620864 TMEM132AQ24JP5 1023 aa8.49□□□□□ -1.05
COLCA1-205ENST00000620864 VPS37CA5D8V6 355 aaPredicted RBP8.49□□□□□ -1.05
COLCA1-205ENST00000620864 DESP17661 470 aa8.48□□□□□ -1.05
COLCA1-205ENST00000620864 SLC4A3P48751 1232 aa8.48□□□□□ -1.05
COLCA1-205ENST00000620864 TMCO3Q6UWJ1 677 aa8.48□□□□□ -1.05
COLCA1-205ENST00000620864 CIZ1Q9ULV3 898 aaPredicted RBP8.48□□□□□ -1.05
COLCA1-205ENST00000620864 XPCQ01831 940 aaPredicted RBP8.48□□□□□ -1.05
COLCA1-205ENST00000620864 UACAQ9BZF9 1416 aa8.48□□□□□ -1.05
COLCA1-205ENST00000620864 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.48□□□□□ -1.05
COLCA1-205ENST00000620864 V9GYY5 206 aaPredicted RBP8.48□□□□□ -1.05
COLCA1-205ENST00000620864 SYNJ2O15056 1496 aa8.48□□□□□ -1.05
COLCA1-205ENST00000620864 SMC2O95347 1197 aa8.48□□□□□ -1.05
COLCA1-205ENST00000620864 DNAJC2Q99543 621 aaKnown RBP8.48□□□□□ -1.05
COLCA1-205ENST00000620864 SEPT11Q9NVA2 429 aaKnown RBP8.48□□□□□ -1.05
COLCA1-205ENST00000620864 CDC45O75419 566 aa8.48□□□□□ -1.05
COLCA1-205ENST00000620864 BAG6P46379 1132 aa8.48□□□□□ -1.05
COLCA1-205ENST00000620864 KIAA1328Q86T90 577 aa8.48□□□□□ -1.05
COLCA1-205ENST00000620864 MPHOSPH9Q99550 1183 aa8.48□□□□□ -1.05
COLCA1-205ENST00000620864 CRACR2AQ9BSW2 395 aa8.48□□□□□ -1.05
COLCA1-205ENST00000620864 SKIV2LQ15477 1246 aaKnown RBP8.48□□□□□ -1.05
COLCA1-205ENST00000620864 ANKRD18BA2A2Z9 1011 aa8.48□□□□□ -1.05
COLCA1-205ENST00000620864 GIGYF2Q6Y7W6 1299 aaKnown RBP8.48□□□□□ -1.05
COLCA1-205ENST00000620864 PRDM10Q9NQV6 1147 aa8.48□□□□□ -1.05
COLCA1-205ENST00000620864 TOM1L2Q6ZVM7 507 aa8.47□□□□□ -1.05
COLCA1-205ENST00000620864 CCDC148Q8NFR7 591 aa8.47□□□□□ -1.05
COLCA1-205ENST00000620864 IFIT2P09913 472 aaKnown RBP8.47□□□□□ -1.05
COLCA1-205ENST00000620864 ZFYVE27Q5T4F4 411 aa8.47□□□□□ -1.05
COLCA1-205ENST00000620864 SSR1P43307 286 aaKnown RBP8.47□□□□□ -1.05
COLCA1-205ENST00000620864 IKQ13123 557 aaPredicted RBP8.47□□□□□ -1.05
COLCA1-205ENST00000620864 FILIP1Q7Z7B0 1213 aa8.47□□□□□ -1.05
COLCA1-205ENST00000620864 JAKMIP3Q5VZ66 844 aa8.47□□□□□ -1.05
COLCA1-205ENST00000620864 MCM5P33992 734 aa8.46□□□□□ -1.05
COLCA1-205ENST00000620864 KANK4Q5T7N3 995 aaPredicted RBP8.46□□□□□ -1.05
COLCA1-205ENST00000620864 RALYLQ86SE5 291 aaKnown RBP8.46□□□□□ -1.05
COLCA1-205ENST00000620864 RBM42Q9BTD8 480 aaKnown RBP8.46□□□□□ -1.05
COLCA1-205ENST00000620864 MAP2K1Q02750 393 aaPredicted RBP8.46□□□□□ -1.05
COLCA1-205ENST00000620864 NFXL1Q6ZNB6 911 aa8.46□□□□□ -1.05
COLCA1-205ENST00000620864 ABTB2Q8N961 1025 aa8.46□□□□□ -1.05
COLCA1-205ENST00000620864 TEFQ10587 303 aa8.46□□□□□ -1.05
COLCA1-205ENST00000620864 SMC1AQ14683 1233 aaKnown RBP8.46□□□□□ -1.05
COLCA1-205ENST00000620864 ANKRD1Q15327 319 aa8.46□□□□□ -1.05
COLCA1-205ENST00000620864 UBXN4Q92575 508 aa8.46□□□□□ -1.05
COLCA1-205ENST00000620864 FAM177BA6PVY3 158 aa8.46□□□□□ -1.06
COLCA1-205ENST00000620864 HMGB1P09429 215 aaKnown RBP8.46□□□□□ -1.06
COLCA1-205ENST00000620864 VPS8Q8N3P4 1428 aa8.46□□□□□ -1.06
COLCA1-205ENST00000620864 ESPNB1AK53 854 aa8.46□□□□□ -1.06
COLCA1-205ENST00000620864 ZSCAN30Q86W11 494 aa8.46□□□□□ -1.06
COLCA1-205ENST00000620864 CEP63Q96MT8 703 aa8.46□□□□□ -1.06
COLCA1-205ENST00000620864 NOP2P46087 812 aaKnown RBP8.46□□□□□ -1.06
COLCA1-205ENST00000620864 SART3Q15020 963 aaKnown RBP8.46□□□□□ -1.06
COLCA1-205ENST00000620864 GCOM1H8Y6P7 765 aaPredicted RBP8.45□□□□□ -1.06
COLCA1-205ENST00000620864 ZSCAN12O43309 604 aa8.45□□□□□ -1.06
COLCA1-205ENST00000620864 MYZAPP0CAP1 466 aa8.45□□□□□ -1.06
COLCA1-205ENST00000620864 SMTNL1A8MU46 457 aa8.45□□□□□ -1.06
COLCA1-205ENST00000620864 HMGB1P1B2RPK0 211 aaPredicted RBP8.45□□□□□ -1.06
COLCA1-205ENST00000620864 IMMTQ16891 758 aaKnown RBP8.45□□□□□ -1.06
COLCA1-205ENST00000620864 DDX54Q8TDD1 881 aaKnown RBP8.45□□□□□ -1.06
COLCA1-205ENST00000620864 FBXO41Q8TF61 875 aa8.45□□□□□ -1.06
COLCA1-205ENST00000620864 FYB1O15117 783 aa8.45□□□□□ -1.06
COLCA1-205ENST00000620864 DDX58O95786 925 aaKnown RBP8.45□□□□□ -1.06
COLCA1-205ENST00000620864 TSPYL2Q9H2G4 693 aaPredicted RBP8.45□□□□□ -1.06
COLCA1-205ENST00000620864 CENPHQ9H3R5 247 aa8.45□□□□□ -1.06
COLCA1-205ENST00000620864 NEMFO60524 1076 aa8.45□□□□□ -1.06
COLCA1-205ENST00000620864 IVLP07476 585 aa8.45□□□□□ -1.06
COLCA1-205ENST00000620864 CCDC83Q8IWF9 413 aa8.45□□□□□ -1.06
COLCA1-205ENST00000620864 TNS4Q8IZW8 715 aa8.45□□□□□ -1.06
COLCA1-205ENST00000620864 GRPEL1Q9HAV7 217 aa8.45□□□□□ -1.06
COLCA1-205ENST00000620864 HSPA2P54652 639 aa8.45□□□□□ -1.06
COLCA1-205ENST00000620864 CCDC102AQ96A19 550 aa8.45□□□□□ -1.06
COLCA1-205ENST00000620864 ANKRD62A6NC57 917 aa8.44□□□□□ -1.06
COLCA1-205ENST00000620864 C6orf163Q5TEZ5 329 aa8.44□□□□□ -1.06
COLCA1-205ENST00000620864 SPECC1LQ69YQ0 1117 aa8.44□□□□□ -1.06
COLCA1-205ENST00000620864 CLUAP1Q96AJ1 413 aa8.44□□□□□ -1.06
COLCA1-205ENST00000620864 CD109Q6YHK3 1445 aa8.44□□□□□ -1.06
COLCA1-205ENST00000620864 WDR33Q9C0J8 1336 aaKnown RBP8.44□□□□□ -1.06
COLCA1-205ENST00000620864 CETN2P41208 172 aa8.44□□□□□ -1.06
COLCA1-205ENST00000620864 DZIP1LQ8IYY4 767 aaKnown RBP8.44□□□□□ -1.06
COLCA1-205ENST00000620864 DDX12PQ92771 950 aa8.44□□□□□ -1.06
COLCA1-205ENST00000620864 EVC2Q86UK5 1308 aa8.44□□□□□ -1.06
COLCA1-205ENST00000620864 SCAPERQ9BY12 1400 aa8.44□□□□□ -1.06
COLCA1-205ENST00000620864 NLRP6P59044 892 aa8.44□□□□□ -1.06
COLCA1-205ENST00000620864 FAM114A1Q8IWE2 563 aa8.44□□□□□ -1.06
COLCA1-205ENST00000620864 TIGD1Q96MW7 591 aa8.44□□□□□ -1.06
COLCA1-205ENST00000620864 SEPT6Q14141 434 aa8.44□□□□□ -1.06
COLCA1-205ENST00000620864 WDR66Q8TBY9 1149 aa8.44□□□□□ -1.06
COLCA1-205ENST00000620864 UIMC1Q96RL1 719 aa8.43□□□□□ -1.06
COLCA1-205ENST00000620864 ZHX1Q9UKY1 873 aaPredicted RBP8.43□□□□□ -1.06
COLCA1-205ENST00000620864 SERPINC1P01008 464 aa8.43□□□□□ -1.06
COLCA1-205ENST00000620864 CA8P35219 290 aa8.43□□□□□ -1.06
COLCA1-205ENST00000620864 IBSPP21815 317 aaPredicted RBP8.43□□□□□ -1.06
COLCA1-205ENST00000620864 PRDM11Q9NQV5 511 aa8.43□□□□□ -1.06
COLCA1-205ENST00000620864 DNAI2Q9GZS0 605 aa8.43□□□□□ -1.06
COLCA1-205ENST00000620864 G3BP1Q13283 466 aaKnown RBP eCLIP8.43□□□□□ -1.06
COLCA1-205ENST00000620864 TAF4BQ92750 862 aa8.43□□□□□ -1.06
COLCA1-205ENST00000620864 GOLGA6L9A6NEM1 432 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms