RNA–Protein interactions for RNA: ENST00000620552.4

AGRN-210, Transcript of agrin, humanhuman

TSL 5 BASIC

Gene AGRN, Length 7,394 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-210ENST00000620552 AK7Q96M32 723 aa16.82■□□□□ 0.28
AGRN-210ENST00000620552 CCDC85AQ96PX6 553 aaPredicted RBP16.82■□□□□ 0.28
AGRN-210ENST00000620552 SMC2O95347 1197 aa16.82■□□□□ 0.28
AGRN-210ENST00000620552 KIAA1107Q9UPP5 1409 aa16.82■□□□□ 0.28
AGRN-210ENST00000620552 HFM1A2PYH4 1435 aa16.81■□□□□ 0.28
AGRN-210ENST00000620552 TOPBP1Q92547 1522 aa16.81■□□□□ 0.28
AGRN-210ENST00000620552 KINO60870 393 aaKnown RBP16.81■□□□□ 0.28
AGRN-210ENST00000620552 EPRSP07814 1512 aaKnown RBP16.81■□□□□ 0.28
AGRN-210ENST00000620552 CCDC173Q0VFZ6 552 aa16.81■□□□□ 0.28
AGRN-210ENST00000620552 ZNF771Q7L3S4 317 aaPredicted RBP16.8■□□□□ 0.28
AGRN-210ENST00000620552 AACSQ86V21 672 aa16.8■□□□□ 0.28
AGRN-210ENST00000620552 ZNF396Q96N95 335 aaPredicted RBP16.8■□□□□ 0.28
AGRN-210ENST00000620552 MPHOSPH10O00566 681 aaKnown RBP16.8■□□□□ 0.28
AGRN-210ENST00000620552 MNS1Q8NEH6 495 aa16.8■□□□□ 0.28
AGRN-210ENST00000620552 HSP90AA2PQ14568 343 aaPredicted RBP16.8■□□□□ 0.28
AGRN-210ENST00000620552 ZSCAN25Q6NSZ9 544 aa16.8■□□□□ 0.28
AGRN-210ENST00000620552 PDZRN3Q9UPQ7 1066 aa16.8■□□□□ 0.28
AGRN-210ENST00000620552 SRCIN1Q9C0H9 1055 aa16.79■□□□□ 0.28
AGRN-210ENST00000620552 FMNL2Q96PY5 1086 aa16.79■□□□□ 0.28
AGRN-210ENST00000620552 TDO2P48775 406 aa16.79■□□□□ 0.28
AGRN-210ENST00000620552 GCC1Q96CN9 775 aa16.79■□□□□ 0.28
AGRN-210ENST00000620552 BCAR3O75815 825 aa16.79■□□□□ 0.28
AGRN-210ENST00000620552 SKIDA1Q1XH10 827 aa16.79■□□□□ 0.28
AGRN-210ENST00000620552 RAI14Q9P0K7 980 aa16.79■□□□□ 0.28
AGRN-210ENST00000620552 FILIP1LQ4L180 1135 aa16.78■□□□□ 0.28
AGRN-210ENST00000620552 TOP2BQ02880 1626 aa16.78■□□□□ 0.28
AGRN-210ENST00000620552 ADAMTS2O95450 1211 aa16.78■□□□□ 0.28
AGRN-210ENST00000620552 STARD3NLO95772 234 aa16.78■□□□□ 0.28
AGRN-210ENST00000620552 IGHMBP2P38935 993 aaKnown RBP16.78■□□□□ 0.28
AGRN-210ENST00000620552 TEX35Q5T0J7 233 aa16.78■□□□□ 0.28
AGRN-210ENST00000620552 SOGA3Q5TF21 947 aa16.78■□□□□ 0.28
AGRN-210ENST00000620552 PIBF1Q8WXW3 757 aa16.78■□□□□ 0.28
AGRN-210ENST00000620552 KIF14Q15058 1648 aa16.78■□□□□ 0.28
AGRN-210ENST00000620552 MATR3P43243 847 aaKnown RBP eCLIP16.78■□□□□ 0.28
AGRN-210ENST00000620552 ZPR1O75312 459 aa16.77■□□□□ 0.28
AGRN-210ENST00000620552 TRIM22Q8IYM9 498 aa16.77■□□□□ 0.28
AGRN-210ENST00000620552 LRP2BPQ9P2M1 347 aa16.77■□□□□ 0.28
AGRN-210ENST00000620552 GNAT3A8MTJ3 354 aa16.77■□□□□ 0.28
AGRN-210ENST00000620552 STK38Q15208 465 aa16.77■□□□□ 0.28
AGRN-210ENST00000620552 CDK13Q14004 1512 aaKnown RBP16.77■□□□□ 0.28
AGRN-210ENST00000620552 ARAP1Q96P48 1450 aa16.77■□□□□ 0.28
AGRN-210ENST00000620552 RNF214Q8ND24 703 aa16.77■□□□□ 0.28
AGRN-210ENST00000620552 CYP46A1Q9Y6A2 500 aa16.77■□□□□ 0.28
AGRN-210ENST00000620552 MIS18AQ9NYP9 233 aa16.77■□□□□ 0.27
AGRN-210ENST00000620552 RDXP35241 583 aaKnown RBP16.76■□□□□ 0.27
AGRN-210ENST00000620552 SMARCE1Q969G3 411 aa16.76■□□□□ 0.27
AGRN-210ENST00000620552 NUDT16Q96DE0 195 aaKnown RBP16.76■□□□□ 0.27
AGRN-210ENST00000620552 LETM1O95202 739 aaPredicted RBP16.76■□□□□ 0.27
AGRN-210ENST00000620552 DAPK1P53355 1430 aa16.75■□□□□ 0.27
AGRN-210ENST00000620552 PDCP20941 246 aa16.75■□□□□ 0.27
AGRN-210ENST00000620552 TMOD3Q9NYL9 352 aa16.75■□□□□ 0.27
AGRN-210ENST00000620552 DNMBPQ6XZF7 1577 aa16.75■□□□□ 0.27
AGRN-210ENST00000620552 SRGAP3O43295 1099 aa16.75■□□□□ 0.27
AGRN-210ENST00000620552 CDR1P51861 262 aa16.75■□□□□ 0.27
AGRN-210ENST00000620552 CAVIN1Q6NZI2 390 aaKnown RBP16.75■□□□□ 0.27
AGRN-210ENST00000620552 TRIM5Q9C035 493 aa16.75■□□□□ 0.27
AGRN-210ENST00000620552 TROQ12816 1431 aaPredicted RBP16.75■□□□□ 0.27
AGRN-210ENST00000620552 PTCD1O75127 700 aaKnown RBP16.74■□□□□ 0.27
AGRN-210ENST00000620552 FIBPO43427 364 aa16.74■□□□□ 0.27
AGRN-210ENST00000620552 ZNF76P36508 570 aa16.74■□□□□ 0.27
AGRN-210ENST00000620552 WAPLQ7Z5K2 1190 aa16.74■□□□□ 0.27
AGRN-210ENST00000620552 ZNF652Q9Y2D9 606 aa16.74■□□□□ 0.27
AGRN-210ENST00000620552 USP5P45974 858 aa16.74■□□□□ 0.27
AGRN-210ENST00000620552 ANKRD1Q15327 319 aa16.74■□□□□ 0.27
AGRN-210ENST00000620552 MCM2P49736 904 aa16.73■□□□□ 0.27
AGRN-210ENST00000620552 CWC27Q6UX04 472 aaKnown RBP16.73■□□□□ 0.27
AGRN-210ENST00000620552 TANGO6Q9C0B7 1094 aa16.73■□□□□ 0.27
AGRN-210ENST00000620552 PRPF40AO75400 957 aaKnown RBP16.73■□□□□ 0.27
AGRN-210ENST00000620552 NSD3Q9BZ95 1437 aa16.73■□□□□ 0.27
AGRN-210ENST00000620552 ARHGEF11O15085 1522 aa16.73■□□□□ 0.27
AGRN-210ENST00000620552 TIAM1Q13009 1591 aa16.73■□□□□ 0.27
AGRN-210ENST00000620552 PDCL3Q9H2J4 239 aa16.73■□□□□ 0.27
AGRN-210ENST00000620552 MYO6Q9UM54 1294 aa16.73■□□□□ 0.27
AGRN-210ENST00000620552 NASPP49321 788 aaPredicted RBP16.73■□□□□ 0.27
AGRN-210ENST00000620552 ANKIB1Q9P2G1 1089 aa16.73■□□□□ 0.27
AGRN-210ENST00000620552 POLA1P09884 1462 aaPredicted RBP16.73■□□□□ 0.27
AGRN-210ENST00000620552 KCNH5Q8NCM2 988 aa16.72■□□□□ 0.27
AGRN-210ENST00000620552 UBAC1Q9BSL1 405 aa16.72■□□□□ 0.27
AGRN-210ENST00000620552 ABCF2Q9UG63 623 aa16.72■□□□□ 0.27
AGRN-210ENST00000620552 USHBP1Q8N6Y0 703 aa16.72■□□□□ 0.27
AGRN-210ENST00000620552 CEP126Q9P2H0 1117 aa16.72■□□□□ 0.27
AGRN-210ENST00000620552 IDH1O75874 414 aaKnown RBP16.72■□□□□ 0.27
AGRN-210ENST00000620552 ARGLU1Q9NWB6 273 aaPredicted RBP16.72■□□□□ 0.27
AGRN-210ENST00000620552 IQGAP2Q13576 1575 aa16.72■□□□□ 0.27
AGRN-210ENST00000620552 FAM135AQ9P2D6 1515 aa16.72■□□□□ 0.27
AGRN-210ENST00000620552 ATAD2Q6PL18 1390 aa16.72■□□□□ 0.27
AGRN-210ENST00000620552 ACBD3Q9H3P7 528 aa16.72■□□□□ 0.27
AGRN-210ENST00000620552 METTL24Q5JXM2 366 aa16.71■□□□□ 0.27
AGRN-210ENST00000620552 FAM13BQ9NYF5 915 aa16.71■□□□□ 0.27
AGRN-210ENST00000620552 TSPY26PQ9H489 355 aa16.71■□□□□ 0.27
AGRN-210ENST00000620552 RPGRIP1LQ68CZ1 1315 aa16.71■□□□□ 0.27
AGRN-210ENST00000620552 MPRIPQ6WCQ1 1025 aa16.71■□□□□ 0.27
AGRN-210ENST00000620552 WDR63Q8IWG1 891 aa16.71■□□□□ 0.27
AGRN-210ENST00000620552 RABEP1Q15276 862 aa16.71■□□□□ 0.27
AGRN-210ENST00000620552 ME1P48163 572 aa16.7■□□□□ 0.26
AGRN-210ENST00000620552 STIM1Q13586 685 aa16.7■□□□□ 0.26
AGRN-210ENST00000620552 PAXIP1Q6ZW49 1069 aaPredicted RBP16.7■□□□□ 0.26
AGRN-210ENST00000620552 TMOD2Q9NZR1 351 aa16.7■□□□□ 0.26
AGRN-210ENST00000620552 CCDC39Q9UFE4 941 aa16.7■□□□□ 0.26
AGRN-210ENST00000620552 JMYQ8N9B5 988 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms