RNA–Protein interactions for RNA: ENST00000619587.1

LHX3-203, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,698 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-203ENST00000619587 ZGPATQ8N5A5 531 aaKnown RBP21.3■■□□□ 1
LHX3-203ENST00000619587 ZKSCAN5Q9Y2L8 839 aa21.3■■□□□ 1
LHX3-203ENST00000619587 TULP4Q9NRJ4 1543 aa21.29■■□□□ 1
LHX3-203ENST00000619587 SAFB2Q14151 953 aaKnown RBP eCLIP21.29■■□□□ 1
LHX3-203ENST00000619587 ATP7AQ04656 1500 aa21.29■■□□□ 1
LHX3-203ENST00000619587 NSFL1CQ9UNZ2 370 aaKnown RBP21.27■■□□□ 1
LHX3-203ENST00000619587 EVC2Q86UK5 1308 aa21.27■■□□□ 1
LHX3-203ENST00000619587 EFCAB6Q5THR3 1501 aa21.27■■□□□ 1
LHX3-203ENST00000619587 ZCCHC11Q5TAX3 1644 aaKnown RBP21.27■■□□□ 1
LHX3-203ENST00000619587 NUTM2DQ5VT03 806 aaPredicted RBP21.26■□□□□ 0.99
LHX3-203ENST00000619587 TMEM63CQ9P1W3 806 aa21.26■□□□□ 0.99
LHX3-203ENST00000619587 ZDHHC9Q9Y397 364 aa21.26■□□□□ 0.99
LHX3-203ENST00000619587 ADGRB3O60242 1522 aa21.26■□□□□ 0.99
LHX3-203ENST00000619587 ELL2O00472 640 aaPredicted RBP21.26■□□□□ 0.99
LHX3-203ENST00000619587 PLEKHM2Q8IWE5 1019 aa21.26■□□□□ 0.99
LHX3-203ENST00000619587 SMAP1Q8IYB5 467 aaPredicted RBP21.26■□□□□ 0.99
LHX3-203ENST00000619587 TSPYL6Q8N831 410 aa21.26■□□□□ 0.99
LHX3-203ENST00000619587 THUMPD2Q9BTF0 503 aaKnown RBP21.26■□□□□ 0.99
LHX3-203ENST00000619587 A0A1W2PP64 1363 aa21.25■□□□□ 0.99
LHX3-203ENST00000619587 SYCE3A1L190 88 aa21.25■□□□□ 0.99
LHX3-203ENST00000619587 MRPL50Q8N5N7 158 aaKnown RBP21.25■□□□□ 0.99
LHX3-203ENST00000619587 USP26Q9BXU7 913 aa21.25■□□□□ 0.99
LHX3-203ENST00000619587 ATAD2Q6PL18 1390 aa21.25■□□□□ 0.99
LHX3-203ENST00000619587 C16orf71Q8IYS4 520 aaPredicted RBP21.24■□□□□ 0.99
LHX3-203ENST00000619587 FOXD4L5Q5VV16 416 aaPredicted RBP21.24■□□□□ 0.99
LHX3-203ENST00000619587 MTERF4Q7Z6M4 381 aaKnown RBP21.24■□□□□ 0.99
LHX3-203ENST00000619587 FOXD4L4Q8WXT5 416 aaPredicted RBP21.24■□□□□ 0.99
LHX3-203ENST00000619587 PPLO60437 1756 aa21.24■□□□□ 0.99
LHX3-203ENST00000619587 RNF214Q8ND24 703 aa21.23■□□□□ 0.99
LHX3-203ENST00000619587 VAMP4O75379 141 aa21.23■□□□□ 0.99
LHX3-203ENST00000619587 ZBTB7CA1YPR0 619 aa21.22■□□□□ 0.99
LHX3-203ENST00000619587 SENP3Q9H4L4 574 aaPredicted RBP21.22■□□□□ 0.99
LHX3-203ENST00000619587 LRSAM1Q6UWE0 723 aa21.22■□□□□ 0.99
LHX3-203ENST00000619587 DIAPH1O60610 1272 aaKnown RBP21.22■□□□□ 0.99
LHX3-203ENST00000619587 OTUD7AQ8TE49 926 aaPredicted RBP21.22■□□□□ 0.99
LHX3-203ENST00000619587 PIK3R4Q99570 1358 aa21.21■□□□□ 0.99
LHX3-203ENST00000619587 A0A0U1RQG5 324 aaPredicted RBP21.21■□□□□ 0.99
LHX3-203ENST00000619587 DYNC1I1O14576 645 aa21.21■□□□□ 0.99
LHX3-203ENST00000619587 BRPF1P55201 1214 aaPredicted RBP21.21■□□□□ 0.99
LHX3-203ENST00000619587 CHD1O14646 1710 aa21.21■□□□□ 0.99
LHX3-203ENST00000619587 PTCH1Q13635 1447 aa21.21■□□□□ 0.99
LHX3-203ENST00000619587 TTC22Q5TAA0 569 aa21.21■□□□□ 0.99
LHX3-203ENST00000619587 PRDM10Q9NQV6 1147 aa21.21■□□□□ 0.99
LHX3-203ENST00000619587 CSPP1Q1MSJ5 1256 aa21.2■□□□□ 0.98
LHX3-203ENST00000619587 FYB1O15117 783 aa21.2■□□□□ 0.98
LHX3-203ENST00000619587 GLI2P10070 1586 aa21.19■□□□□ 0.98
LHX3-203ENST00000619587 SASS6Q6UVJ0 657 aa21.19■□□□□ 0.98
LHX3-203ENST00000619587 CCDC39Q9UFE4 941 aa21.19■□□□□ 0.98
LHX3-203ENST00000619587 ABCC4O15439 1325 aa21.19■□□□□ 0.98
LHX3-203ENST00000619587 PRKAR2BP31323 418 aa21.19■□□□□ 0.98
LHX3-203ENST00000619587 JARID2Q92833 1246 aaPredicted RBP21.19■□□□□ 0.98
LHX3-203ENST00000619587 KNDC1Q76NI1 1749 aa21.18■□□□□ 0.98
LHX3-203ENST00000619587 ARHGEF28Q8N1W1 1705 aaKnown RBP21.18■□□□□ 0.98
LHX3-203ENST00000619587 CWC22Q9HCG8 908 aaKnown RBP21.18■□□□□ 0.98
LHX3-203ENST00000619587 LRRC7Q96NW7 1537 aa21.18■□□□□ 0.98
LHX3-203ENST00000619587 ARHGAP45Q92619 1136 aa21.18■□□□□ 0.98
LHX3-203ENST00000619587 CHMP4BQ9H444 224 aaKnown RBP21.18■□□□□ 0.98
LHX3-203ENST00000619587 MCM5P33992 734 aa21.17■□□□□ 0.98
LHX3-203ENST00000619587 REREQ9P2R6 1566 aa21.17■□□□□ 0.98
LHX3-203ENST00000619587 FANCAO15360 1455 aa21.17■□□□□ 0.98
LHX3-203ENST00000619587 FBLN1P23142 703 aa21.17■□□□□ 0.98
LHX3-203ENST00000619587 SRPK2P78362 688 aaKnown RBP21.17■□□□□ 0.98
LHX3-203ENST00000619587 MPNDQ8N594 471 aa21.16■□□□□ 0.98
LHX3-203ENST00000619587 ZNF428Q96B54 188 aa21.16■□□□□ 0.98
LHX3-203ENST00000619587 PHACTR3Q96KR7 559 aa21.16■□□□□ 0.98
LHX3-203ENST00000619587 PUS7Q96PZ0 661 aaKnown RBP21.16■□□□□ 0.98
LHX3-203ENST00000619587 INTS3Q68E01 1043 aaKnown RBP21.15■□□□□ 0.98
LHX3-203ENST00000619587 ST18O60284 1047 aa21.15■□□□□ 0.98
LHX3-203ENST00000619587 APBB1O00213 710 aa21.14■□□□□ 0.98
LHX3-203ENST00000619587 SDSP20132 328 aa21.14■□□□□ 0.98
LHX3-203ENST00000619587 TSC1Q92574 1164 aa21.14■□□□□ 0.98
LHX3-203ENST00000619587 DCTPP1Q9H773 170 aa21.14■□□□□ 0.97
LHX3-203ENST00000619587 ZHX1Q9UKY1 873 aaPredicted RBP21.13■□□□□ 0.97
LHX3-203ENST00000619587 SMARCA5O60264 1052 aaPredicted RBP21.13■□□□□ 0.97
LHX3-203ENST00000619587 PTMAP06454 111 aaKnown RBP21.13■□□□□ 0.97
LHX3-203ENST00000619587 HMOX1P09601 288 aa21.13■□□□□ 0.97
LHX3-203ENST00000619587 STK26Q9P289 416 aa21.13■□□□□ 0.97
LHX3-203ENST00000619587 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.13■□□□□ 0.97
LHX3-203ENST00000619587 FCHSD2O94868 740 aa21.12■□□□□ 0.97
LHX3-203ENST00000619587 MBIPQ9NS73 344 aa21.12■□□□□ 0.97
LHX3-203ENST00000619587 CAMSAP1Q5T5Y3 1602 aa21.12■□□□□ 0.97
LHX3-203ENST00000619587 NPATQ14207 1427 aa21.11■□□□□ 0.97
LHX3-203ENST00000619587 PNPLA6Q8IY17 1366 aa21.11■□□□□ 0.97
LHX3-203ENST00000619587 FAM135BQ49AJ0 1406 aa21.11■□□□□ 0.97
LHX3-203ENST00000619587 C8orf58Q8NAV2 365 aa21.11■□□□□ 0.97
LHX3-203ENST00000619587 ARAP3Q8WWN8 1544 aa21.1■□□□□ 0.97
LHX3-203ENST00000619587 TWISTNBQ3B726 338 aaPredicted RBP21.1■□□□□ 0.97
LHX3-203ENST00000619587 ANKRD26Q9UPS8 1709 aa21.1■□□□□ 0.97
LHX3-203ENST00000619587 KIAA2012Q0VF49 1180 aa21.09■□□□□ 0.97
LHX3-203ENST00000619587 NFE2L2Q16236 605 aa21.09■□□□□ 0.97
LHX3-203ENST00000619587 CCDC94Q9BW85 323 aaPredicted RBP21.09■□□□□ 0.97
LHX3-203ENST00000619587 ZNF830Q96NB3 372 aaPredicted RBP21.09■□□□□ 0.97
LHX3-203ENST00000619587 MINK1Q8N4C8 1332 aaPredicted RBP21.08■□□□□ 0.97
LHX3-203ENST00000619587 MBD3O95983 291 aa21.08■□□□□ 0.96
LHX3-203ENST00000619587 FOXD4L6Q3SYB3 417 aaPredicted RBP21.08■□□□□ 0.96
LHX3-203ENST00000619587 FOXD4L3Q6VB84 417 aaPredicted RBP21.08■□□□□ 0.96
LHX3-203ENST00000619587 TSPY26PQ9H489 355 aa21.08■□□□□ 0.96
LHX3-203ENST00000619587 DMTNQ08495 405 aa21.07■□□□□ 0.96
LHX3-203ENST00000619587 DNTTIP2Q5QJE6 756 aaKnown RBP21.07■□□□□ 0.96
LHX3-203ENST00000619587 UTP14CQ5TAP6 766 aaKnown RBP21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms