RNA–Protein interactions for RNA: ENST00000619485.4

TP53-225, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,506 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-225ENST00000619485 HMOX1P09601 288 aa13.09□□□□□ -0.31
TP53-225ENST00000619485 ZKSCAN2Q63HK3 967 aa13.09□□□□□ -0.31
TP53-225ENST00000619485 TERF2IPQ9NYB0 399 aa13.09□□□□□ -0.31
TP53-225ENST00000619485 THUMPD2Q9BTF0 503 aaKnown RBP13.08□□□□□ -0.32
TP53-225ENST00000619485 ANTXR1Q9H6X2 564 aa13.08□□□□□ -0.32
TP53-225ENST00000619485 RGPD8O14715 1765 aaPredicted RBP13.08□□□□□ -0.32
TP53-225ENST00000619485 POLKQ9UBT6 870 aa13.08□□□□□ -0.32
TP53-225ENST00000619485 ATP7BP35670 1465 aa13.08□□□□□ -0.32
TP53-225ENST00000619485 MAP2P11137 1827 aaKnown RBP13.07□□□□□ -0.32
TP53-225ENST00000619485 HDGFL2Q7Z4V5 671 aaPredicted RBP13.07□□□□□ -0.32
TP53-225ENST00000619485 FAM43AQ8N2R8 423 aa13.07□□□□□ -0.32
TP53-225ENST00000619485 PLEKHF1Q96S99 279 aa13.07□□□□□ -0.32
TP53-225ENST00000619485 C22orf23Q9BZE7 217 aa13.07□□□□□ -0.32
TP53-225ENST00000619485 EXOSC9Q06265 439 aaKnown RBP13.07□□□□□ -0.32
TP53-225ENST00000619485 VIRMAQ69YN4 1812 aaKnown RBP13.07□□□□□ -0.32
TP53-225ENST00000619485 PHACTR3Q96KR7 559 aa13.06□□□□□ -0.32
TP53-225ENST00000619485 PUS7Q96PZ0 661 aaKnown RBP13.06□□□□□ -0.32
TP53-225ENST00000619485 RIMS1Q86UR5 1692 aaKnown RBP13.06□□□□□ -0.32
TP53-225ENST00000619485 L1TD1Q5T7N2 865 aaKnown RBP13.06□□□□□ -0.32
TP53-225ENST00000619485 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.06□□□□□ -0.32
TP53-225ENST00000619485 CPSF1Q10570 1443 aaKnown RBP13.06□□□□□ -0.32
TP53-225ENST00000619485 VASPP50552 380 aaPredicted RBP13.05□□□□□ -0.32
TP53-225ENST00000619485 TRIM35Q9UPQ4 493 aa13.05□□□□□ -0.32
TP53-225ENST00000619485 KNDC1Q76NI1 1749 aa13.05□□□□□ -0.32
TP53-225ENST00000619485 TRIM27P14373 513 aa13.05□□□□□ -0.32
TP53-225ENST00000619485 PAXIP1Q6ZW49 1069 aaPredicted RBP13.05□□□□□ -0.32
TP53-225ENST00000619485 AMOTL2Q9Y2J4 779 aa13.05□□□□□ -0.32
TP53-225ENST00000619485 GOLGA6L3A6NEY3 463 aa13.04□□□□□ -0.32
TP53-225ENST00000619485 LRRC7Q96NW7 1537 aa13.04□□□□□ -0.32
TP53-225ENST00000619485 AAMPQ13685 434 aa13.04□□□□□ -0.32
TP53-225ENST00000619485 SSH1Q8WYL5 1049 aa13.04□□□□□ -0.32
TP53-225ENST00000619485 MED14O60244 1454 aa13.04□□□□□ -0.32
TP53-225ENST00000619485 NSD2O96028 1365 aa13.04□□□□□ -0.32
TP53-225ENST00000619485 PLEKHG1Q9ULL1 1385 aa13.04□□□□□ -0.32
TP53-225ENST00000619485 TECPR2O15040 1411 aa13.03□□□□□ -0.32
TP53-225ENST00000619485 NOB1Q9ULX3 412 aaKnown RBP13.03□□□□□ -0.32
TP53-225ENST00000619485 MCM4P33991 863 aa13.03□□□□□ -0.32
TP53-225ENST00000619485 NUTM2GQ5VZR2 741 aa13.03□□□□□ -0.32
TP53-225ENST00000619485 PANK2Q9BZ23 570 aa13.03□□□□□ -0.32
TP53-225ENST00000619485 RRAGDQ9NQL2 400 aaPredicted RBP13.03□□□□□ -0.32
TP53-225ENST00000619485 ADGRB2O60241 1585 aa13.03□□□□□ -0.32
TP53-225ENST00000619485 CDC42BPGQ6DT37 1551 aa13.03□□□□□ -0.32
TP53-225ENST00000619485 KCNA6P17658 529 aa13.02□□□□□ -0.32
TP53-225ENST00000619485 CCDC27Q2M243 656 aa13.02□□□□□ -0.32
TP53-225ENST00000619485 HSCBQ8IWL3 235 aa13.02□□□□□ -0.32
TP53-225ENST00000619485 CFAP44Q96MT7 982 aa13.02□□□□□ -0.32
TP53-225ENST00000619485 ACEP12821 1306 aa13.02□□□□□ -0.32
TP53-225ENST00000619485 MON2Q7Z3U7 1717 aa13.02□□□□□ -0.32
TP53-225ENST00000619485 AEBP1Q8IUX7 1158 aa13.02□□□□□ -0.33
TP53-225ENST00000619485 LNPKQ9C0E8 428 aa13.02□□□□□ -0.33
TP53-225ENST00000619485 AKAP12Q02952 1782 aa13.01□□□□□ -0.33
TP53-225ENST00000619485 TMPOP42166 694 aaKnown RBP13.01□□□□□ -0.33
TP53-225ENST00000619485 TMEM57Q8N5G2 664 aa13.01□□□□□ -0.33
TP53-225ENST00000619485 DIAPH1O60610 1272 aaKnown RBP13.01□□□□□ -0.33
TP53-225ENST00000619485 PRKAR2BP31323 418 aa13.01□□□□□ -0.33
TP53-225ENST00000619485 ATF7IPQ6VMQ6 1270 aa13.01□□□□□ -0.33
TP53-225ENST00000619485 CCDC61Q9Y6R9 512 aa13.01□□□□□ -0.33
TP53-225ENST00000619485 ITSN1Q15811 1721 aa13□□□□□ -0.33
TP53-225ENST00000619485 ARHGAP23Q9P227 1491 aa13□□□□□ -0.33
TP53-225ENST00000619485 FAM135BQ49AJ0 1406 aa13□□□□□ -0.33
TP53-225ENST00000619485 XRCC6P12956 609 aaKnown RBP eCLIP13□□□□□ -0.33
TP53-225ENST00000619485 RSPH6AQ9H0K4 717 aa13□□□□□ -0.33
TP53-225ENST00000619485 CHMP5Q9NZZ3 219 aa13□□□□□ -0.33
TP53-225ENST00000619485 DDX19BQ9UMR2 479 aa13□□□□□ -0.33
TP53-225ENST00000619485 FAM83GA6ND36 823 aa13□□□□□ -0.33
TP53-225ENST00000619485 TRAK2O60296 914 aa13□□□□□ -0.33
TP53-225ENST00000619485 RIPK4P57078 832 aa13□□□□□ -0.33
TP53-225ENST00000619485 PNPLA6Q8IY17 1366 aa12.99□□□□□ -0.33
TP53-225ENST00000619485 DCTN1Q14203 1278 aa12.99□□□□□ -0.33
TP53-225ENST00000619485 EDC4Q6P2E9 1401 aaKnown RBP12.99□□□□□ -0.33
TP53-225ENST00000619485 PEAK1Q9H792 1746 aa12.99□□□□□ -0.33
TP53-225ENST00000619485 TOPAZ1Q8N9V7 1692 aa12.99□□□□□ -0.33
TP53-225ENST00000619485 FBXO3Q9UK99 471 aa12.99□□□□□ -0.33
TP53-225ENST00000619485 SLIT1O75093 1534 aa12.99□□□□□ -0.33
TP53-225ENST00000619485 HSP90AA1P07900 732 aaKnown RBP12.98□□□□□ -0.33
TP53-225ENST00000619485 NRKQ7Z2Y5 1582 aa12.98□□□□□ -0.33
TP53-225ENST00000619485 EID1Q9Y6B2 187 aa12.98□□□□□ -0.33
TP53-225ENST00000619485 IL13P35225 146 aa12.97□□□□□ -0.33
TP53-225ENST00000619485 TTC21BQ7Z4L5 1316 aa12.97□□□□□ -0.33
TP53-225ENST00000619485 C1orf115Q9H7X2 142 aa12.97□□□□□ -0.33
TP53-225ENST00000619485 CEP170BQ9Y4F5 1589 aaPredicted RBP12.97□□□□□ -0.33
TP53-225ENST00000619485 HSP90AB1P08238 724 aaKnown RBP12.96□□□□□ -0.33
TP53-225ENST00000619485 HDAC1Q13547 482 aaPredicted RBP12.96□□□□□ -0.33
TP53-225ENST00000619485 DIP2AQ14689 1571 aa12.96□□□□□ -0.33
TP53-225ENST00000619485 HSP90AB2PQ58FF8 381 aa12.96□□□□□ -0.33
TP53-225ENST00000619485 ZMYND15Q9H091 742 aa12.96□□□□□ -0.33
TP53-225ENST00000619485 NAP1L5Q96NT1 182 aaPredicted RBP12.96□□□□□ -0.34
TP53-225ENST00000619485 ELL2O00472 640 aaPredicted RBP12.95□□□□□ -0.34
TP53-225ENST00000619485 ANKRD45Q5TZF3 282 aa12.95□□□□□ -0.34
TP53-225ENST00000619485 COG3Q96JB2 828 aa12.95□□□□□ -0.34
TP53-225ENST00000619485 IPO8O15397 1037 aaKnown RBP12.94□□□□□ -0.34
TP53-225ENST00000619485 CT47B1P0C2W7 299 aaPredicted RBP12.94□□□□□ -0.34
TP53-225ENST00000619485 ZBTB40Q9NUA8 1239 aa12.94□□□□□ -0.34
TP53-225ENST00000619485 XRN1Q8IZH2 1706 aaKnown RBP12.94□□□□□ -0.34
TP53-225ENST00000619485 DLG5Q8TDM6 1919 aa12.93□□□□□ -0.34
TP53-225ENST00000619485 HDGFP51858 240 aaKnown RBP12.93□□□□□ -0.34
TP53-225ENST00000619485 KRT24Q2M2I5 525 aa12.93□□□□□ -0.34
TP53-225ENST00000619485 SMC5Q8IY18 1101 aa12.93□□□□□ -0.34
TP53-225ENST00000619485 THEMISQ8N1K5 641 aaPredicted RBP12.93□□□□□ -0.34
TP53-225ENST00000619485 TSPYL6Q8N831 410 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms