RNA–Protein interactions for RNA: ENST00000619193.4

RDM1-223, Transcript of RAD52 motif containing 1, humanhuman

TSL 1 (best)

Gene RDM1, Length 686 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDM1-223ENST00000619193 UBR1Q8IWV7 1749 aa7.68□□□□□ -1.18
RDM1-223ENST00000619193 PNPLA6Q8IY17 1366 aa7.68□□□□□ -1.18
RDM1-223ENST00000619193 LTKP29376 864 aa7.67□□□□□ -1.18
RDM1-223ENST00000619193 TMEM132EQ6IEE7 984 aa7.67□□□□□ -1.18
RDM1-223ENST00000619193 COG6Q9Y2V7 657 aa7.67□□□□□ -1.18
RDM1-223ENST00000619193 A0A1W2PP64 1363 aa7.67□□□□□ -1.18
RDM1-223ENST00000619193 KIF20BQ96Q89 1820 aa7.66□□□□□ -1.18
RDM1-223ENST00000619193 CFAP65Q6ZU64 1925 aaKnown RBP7.66□□□□□ -1.18
RDM1-223ENST00000619193 RGS3P49796 1198 aa7.66□□□□□ -1.18
RDM1-223ENST00000619193 MTHFSP49914 203 aa7.66□□□□□ -1.18
RDM1-223ENST00000619193 AAMPQ13685 434 aa7.66□□□□□ -1.18
RDM1-223ENST00000619193 MORC1Q86VD1 984 aa7.66□□□□□ -1.18
RDM1-223ENST00000619193 SLAIN2Q9P270 581 aa7.66□□□□□ -1.18
RDM1-223ENST00000619193 TRIM35Q9UPQ4 493 aa7.66□□□□□ -1.18
RDM1-223ENST00000619193 PDZRN3Q9UPQ7 1066 aa7.66□□□□□ -1.18
RDM1-223ENST00000619193 TRAK1Q9UPV9 953 aa7.66□□□□□ -1.18
RDM1-223ENST00000619193 RRP7AQ9Y3A4 280 aaKnown RBP7.66□□□□□ -1.18
RDM1-223ENST00000619193 MAPK8IP3Q9UPT6 1336 aa7.66□□□□□ -1.18
RDM1-223ENST00000619193 EP400Q96L91 3159 aa7.66□□□□□ -1.18
RDM1-223ENST00000619193 FRAT1Q92837 279 aaPredicted RBP7.65□□□□□ -1.18
RDM1-223ENST00000619193 DLC1Q96QB1 1528 aa7.65□□□□□ -1.18
RDM1-223ENST00000619193 CAMTA1Q9Y6Y1 1673 aa7.65□□□□□ -1.18
RDM1-223ENST00000619193 ARHGAP23Q9P227 1491 aa7.64□□□□□ -1.19
RDM1-223ENST00000619193 PPIP5K1Q6PFW1 1433 aa7.64□□□□□ -1.19
RDM1-223ENST00000619193 MSH6P52701 1360 aa7.64□□□□□ -1.19
RDM1-223ENST00000619193 GSE1Q14687 1217 aa7.64□□□□□ -1.19
RDM1-223ENST00000619193 PROSER2Q86WR7 435 aaPredicted RBP7.64□□□□□ -1.19
RDM1-223ENST00000619193 TBC1D32Q96NH3 1257 aa7.64□□□□□ -1.19
RDM1-223ENST00000619193 STAG3Q9UJ98 1225 aa7.64□□□□□ -1.19
RDM1-223ENST00000619193 NRXN3Q9Y4C0 1643 aa7.63□□□□□ -1.19
RDM1-223ENST00000619193 YTHDC2Q9H6S0 1430 aaKnown RBP7.63□□□□□ -1.19
RDM1-223ENST00000619193 NCOA3Q9Y6Q9 1424 aa7.63□□□□□ -1.19
RDM1-223ENST00000619193 IL16Q14005 1332 aa7.63□□□□□ -1.19
RDM1-223ENST00000619193 FRAT2O75474 233 aaPredicted RBP7.63□□□□□ -1.19
RDM1-223ENST00000619193 PRR29P0C7W0 189 aa7.63□□□□□ -1.19
RDM1-223ENST00000619193 ZNF784Q8NCA9 323 aaPredicted RBP7.63□□□□□ -1.19
RDM1-223ENST00000619193 PIK3R4Q99570 1358 aa7.62□□□□□ -1.19
RDM1-223ENST00000619193 EVC2Q86UK5 1308 aa7.62□□□□□ -1.19
RDM1-223ENST00000619193 CT47B1P0C2W7 299 aaPredicted RBP7.62□□□□□ -1.19
RDM1-223ENST00000619193 C1QTNF8P60827 252 aa7.62□□□□□ -1.19
RDM1-223ENST00000619193 MVPQ14764 893 aaKnown RBP7.62□□□□□ -1.19
RDM1-223ENST00000619193 PMFBP1Q8TBY8 1022 aa7.62□□□□□ -1.19
RDM1-223ENST00000619193 BRPF3Q9ULD4 1205 aa7.62□□□□□ -1.19
RDM1-223ENST00000619193 SLIT1O75093 1534 aa7.62□□□□□ -1.19
RDM1-223ENST00000619193 TMPOP42166 694 aaKnown RBP7.61□□□□□ -1.19
RDM1-223ENST00000619193 HDAC1Q13547 482 aaPredicted RBP7.61□□□□□ -1.19
RDM1-223ENST00000619193 IDI1Q13907 227 aa7.61□□□□□ -1.19
RDM1-223ENST00000619193 SMC5Q8IY18 1101 aa7.61□□□□□ -1.19
RDM1-223ENST00000619193 CABP2Q9NPB3 220 aa7.61□□□□□ -1.19
RDM1-223ENST00000619193 NRKQ7Z2Y5 1582 aa7.6□□□□□ -1.19
RDM1-223ENST00000619193 BRWD3Q6RI45 1802 aa7.6□□□□□ -1.19
RDM1-223ENST00000619193 FYB1O15117 783 aa7.6□□□□□ -1.19
RDM1-223ENST00000619193 TRIM27P14373 513 aa7.6□□□□□ -1.19
RDM1-223ENST00000619193 DDIT3P35638 169 aa7.6□□□□□ -1.19
RDM1-223ENST00000619193 BRPF1P55201 1214 aaPredicted RBP7.6□□□□□ -1.19
RDM1-223ENST00000619193 TXNDC2Q86VQ3 553 aa7.6□□□□□ -1.19
RDM1-223ENST00000619193 CCDC125Q86Z20 511 aa7.6□□□□□ -1.19
RDM1-223ENST00000619193 SSH1Q8WYL5 1049 aa7.6□□□□□ -1.19
RDM1-223ENST00000619193 NGLY1Q96IV0 654 aa7.6□□□□□ -1.19
RDM1-223ENST00000619193 TBC1D2Q9BYX2 928 aa7.6□□□□□ -1.19
RDM1-223ENST00000619193 KNDC1Q76NI1 1749 aa7.6□□□□□ -1.19
RDM1-223ENST00000619193 MON2Q7Z3U7 1717 aa7.6□□□□□ -1.19
RDM1-223ENST00000619193 ATP7BP35670 1465 aa7.6□□□□□ -1.19
RDM1-223ENST00000619193 PTCH1Q13635 1447 aa7.6□□□□□ -1.19
RDM1-223ENST00000619193 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.59□□□□□ -1.19
RDM1-223ENST00000619193 VGFO15240 615 aaPredicted RBP7.59□□□□□ -1.19
RDM1-223ENST00000619193 ADAMTS2O95450 1211 aa7.59□□□□□ -1.19
RDM1-223ENST00000619193 PRKAR2AP13861 404 aaKnown RBP7.59□□□□□ -1.19
RDM1-223ENST00000619193 KCNA6P17658 529 aa7.59□□□□□ -1.19
RDM1-223ENST00000619193 TNNT2P45379 298 aaPredicted RBP7.59□□□□□ -1.19
RDM1-223ENST00000619193 EXOSC9Q06265 439 aaKnown RBP7.59□□□□□ -1.19
RDM1-223ENST00000619193 TSR2Q969E8 191 aaKnown RBP7.59□□□□□ -1.19
RDM1-223ENST00000619193 SLC26A8Q96RN1 970 aa7.59□□□□□ -1.19
RDM1-223ENST00000619193 BCL2L13Q9BXK5 485 aa7.59□□□□□ -1.19
RDM1-223ENST00000619193 MYH16Q9H6N6 1097 aa7.59□□□□□ -1.19
RDM1-223ENST00000619193 ATRNO75882 1429 aa7.59□□□□□ -1.19
RDM1-223ENST00000619193 CPSF1Q10570 1443 aaKnown RBP7.59□□□□□ -1.19
RDM1-223ENST00000619193 CHGAP10645 457 aaKnown RBP7.58□□□□□ -1.2
RDM1-223ENST00000619193 NEUROD2Q15784 382 aa7.58□□□□□ -1.2
RDM1-223ENST00000619193 ZKSCAN2Q63HK3 967 aa7.58□□□□□ -1.2
RDM1-223ENST00000619193 DZIP1LQ8IYY4 767 aaKnown RBP7.58□□□□□ -1.2
RDM1-223ENST00000619193 CFAP53Q96M91 514 aa7.58□□□□□ -1.2
RDM1-223ENST00000619193 ZBTB40Q9NUA8 1239 aa7.58□□□□□ -1.2
RDM1-223ENST00000619193 AKAP12Q02952 1782 aa7.58□□□□□ -1.2
RDM1-223ENST00000619193 SLC34A2O95436 690 aa7.57□□□□□ -1.2
RDM1-223ENST00000619193 U2AF1L5P0DN76 240 aaPredicted RBP7.57□□□□□ -1.2
RDM1-223ENST00000619193 U2AF1Q01081 240 aaKnown RBP eCLIP7.57□□□□□ -1.2
RDM1-223ENST00000619193 R3HDM1Q15032 1099 aaKnown RBP7.57□□□□□ -1.2
RDM1-223ENST00000619193 DDX17Q92841 729 aaKnown RBP7.57□□□□□ -1.2
RDM1-223ENST00000619193 RSPH6AQ9H0K4 717 aa7.57□□□□□ -1.2
RDM1-223ENST00000619193 SLC52A1Q9NWF4 448 aa7.57□□□□□ -1.2
RDM1-223ENST00000619193 POGKQ9P215 609 aa7.57□□□□□ -1.2
RDM1-223ENST00000619193 DLG5Q8TDM6 1919 aa7.56□□□□□ -1.2
RDM1-223ENST00000619193 RGPD1P0DJD0 1748 aa7.56□□□□□ -1.2
RDM1-223ENST00000619193 FSD2A1L4K1 749 aa7.56□□□□□ -1.2
RDM1-223ENST00000619193 ZNF853P0CG23 659 aa7.56□□□□□ -1.2
RDM1-223ENST00000619193 ATF7IPQ6VMQ6 1270 aa7.56□□□□□ -1.2
RDM1-223ENST00000619193 BRINP3Q76B58 766 aa7.56□□□□□ -1.2
RDM1-223ENST00000619193 TMEM57Q8N5G2 664 aa7.56□□□□□ -1.2
RDM1-223ENST00000619193 GGNBP2Q9H3C7 697 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms