RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 CLUAP1Q96AJ1 413 aa14.66□□□□□ -0.06
PCDHGA9-202ENST00000616887 COG3Q96JB2 828 aa14.66□□□□□ -0.06
PCDHGA9-202ENST00000616887 THUMPD2Q9BTF0 503 aaKnown RBP14.66□□□□□ -0.06
PCDHGA9-202ENST00000616887 RBM33Q96EV2 1170 aaKnown RBP14.65□□□□□ -0.06
PCDHGA9-202ENST00000616887 TCERG1O14776 1098 aaKnown RBP14.65□□□□□ -0.06
PCDHGA9-202ENST00000616887 MAP2P11137 1827 aaKnown RBP14.65□□□□□ -0.06
PCDHGA9-202ENST00000616887 BACH2Q9BYV9 841 aa14.65□□□□□ -0.06
PCDHGA9-202ENST00000616887 EXOSC9Q06265 439 aaKnown RBP14.64□□□□□ -0.07
PCDHGA9-202ENST00000616887 MON2Q7Z3U7 1717 aa14.64□□□□□ -0.07
PCDHGA9-202ENST00000616887 IL13P35225 146 aa14.64□□□□□ -0.07
PCDHGA9-202ENST00000616887 MYH16Q9H6N6 1097 aa14.64□□□□□ -0.07
PCDHGA9-202ENST00000616887 TTC21BQ7Z4L5 1316 aa14.63□□□□□ -0.07
PCDHGA9-202ENST00000616887 KCNA6P17658 529 aa14.63□□□□□ -0.07
PCDHGA9-202ENST00000616887 PTCH1Q13635 1447 aa14.62□□□□□ -0.07
PCDHGA9-202ENST00000616887 IGHDP01880 384 aa14.62□□□□□ -0.07
PCDHGA9-202ENST00000616887 FCHSD2O94868 740 aa14.61□□□□□ -0.07
PCDHGA9-202ENST00000616887 SLC4A3P48751 1232 aa14.61□□□□□ -0.07
PCDHGA9-202ENST00000616887 AKAP12Q02952 1782 aa14.61□□□□□ -0.07
PCDHGA9-202ENST00000616887 ITSN1Q15811 1721 aa14.61□□□□□ -0.07
PCDHGA9-202ENST00000616887 USP6P35125 1406 aa14.6□□□□□ -0.07
PCDHGA9-202ENST00000616887 CENPQQ7L2Z9 268 aaPredicted RBP14.6□□□□□ -0.07
PCDHGA9-202ENST00000616887 AEBP1Q8IUX7 1158 aa14.6□□□□□ -0.07
PCDHGA9-202ENST00000616887 CDK12Q9NYV4 1490 aaPredicted RBP14.6□□□□□ -0.07
PCDHGA9-202ENST00000616887 PDE3AQ14432 1141 aa14.6□□□□□ -0.07
PCDHGA9-202ENST00000616887 ZNF692Q9BU19 519 aaPredicted RBP14.6□□□□□ -0.07
PCDHGA9-202ENST00000616887 RGS3P49796 1198 aa14.59□□□□□ -0.07
PCDHGA9-202ENST00000616887 AATKQ6ZMQ8 1374 aa14.59□□□□□ -0.07
PCDHGA9-202ENST00000616887 TOPAZ1Q8N9V7 1692 aa14.59□□□□□ -0.07
PCDHGA9-202ENST00000616887 PLEKHG3A1L390 1219 aa14.59□□□□□ -0.07
PCDHGA9-202ENST00000616887 FAM83GA6ND36 823 aa14.59□□□□□ -0.07
PCDHGA9-202ENST00000616887 NRKQ7Z2Y5 1582 aa14.58□□□□□ -0.08
PCDHGA9-202ENST00000616887 SSH1Q8WYL5 1049 aa14.58□□□□□ -0.08
PCDHGA9-202ENST00000616887 XRN1Q8IZH2 1706 aaKnown RBP14.58□□□□□ -0.08
PCDHGA9-202ENST00000616887 HSP90AB2PQ58FF8 381 aa14.58□□□□□ -0.08
PCDHGA9-202ENST00000616887 DDRGK1Q96HY6 314 aa14.58□□□□□ -0.08
PCDHGA9-202ENST00000616887 SMC4Q9NTJ3 1288 aa14.58□□□□□ -0.08
PCDHGA9-202ENST00000616887 OVOS2A0A0J9YW53 1432 aa14.58□□□□□ -0.08
PCDHGA9-202ENST00000616887 OVOS2Q6IE36 1432 aa14.58□□□□□ -0.08
PCDHGA9-202ENST00000616887 DCTN1Q14203 1278 aa14.57□□□□□ -0.08
PCDHGA9-202ENST00000616887 EIF4A2Q14240 407 aaKnown RBP14.57□□□□□ -0.08
PCDHGA9-202ENST00000616887 NUTM2GQ5VZR2 741 aa14.57□□□□□ -0.08
PCDHGA9-202ENST00000616887 NFE2L2Q16236 605 aa14.56□□□□□ -0.08
PCDHGA9-202ENST00000616887 NGDNQ8NEJ9 315 aaKnown RBP14.56□□□□□ -0.08
PCDHGA9-202ENST00000616887 PCDHB15Q9Y5E8 787 aa14.56□□□□□ -0.08
PCDHGA9-202ENST00000616887 RGPD8O14715 1765 aaPredicted RBP14.55□□□□□ -0.08
PCDHGA9-202ENST00000616887 ZNF335Q9H4Z2 1342 aaPredicted RBP14.55□□□□□ -0.08
PCDHGA9-202ENST00000616887 SSH2Q76I76 1423 aa14.54□□□□□ -0.08
PCDHGA9-202ENST00000616887 ELL2O00472 640 aaPredicted RBP14.54□□□□□ -0.08
PCDHGA9-202ENST00000616887 MS4A1P11836 297 aa14.54□□□□□ -0.08
PCDHGA9-202ENST00000616887 TRIM27P14373 513 aa14.54□□□□□ -0.08
PCDHGA9-202ENST00000616887 SULT6B1Q6IMI4 303 aa14.54□□□□□ -0.08
PCDHGA9-202ENST00000616887 CHD2O14647 1828 aaKnown RBP14.54□□□□□ -0.08
PCDHGA9-202ENST00000616887 TSPYL6Q8N831 410 aa14.54□□□□□ -0.08
PCDHGA9-202ENST00000616887 PNNQ9H307 717 aaKnown RBP14.54□□□□□ -0.08
PCDHGA9-202ENST00000616887 PEAK1Q9H792 1746 aa14.53□□□□□ -0.08
PCDHGA9-202ENST00000616887 FRAT2O75474 233 aaPredicted RBP14.53□□□□□ -0.08
PCDHGA9-202ENST00000616887 RRAGDQ9NQL2 400 aaPredicted RBP14.53□□□□□ -0.08
PCDHGA9-202ENST00000616887 NOB1Q9ULX3 412 aaKnown RBP14.53□□□□□ -0.08
PCDHGA9-202ENST00000616887 IL16Q14005 1332 aa14.53□□□□□ -0.08
PCDHGA9-202ENST00000616887 ZKSCAN2Q63HK3 967 aa14.52□□□□□ -0.08
PCDHGA9-202ENST00000616887 FTSJ3Q8IY81 847 aaKnown RBP14.52□□□□□ -0.08
PCDHGA9-202ENST00000616887 MAP3K19Q56UN5 1328 aa14.52□□□□□ -0.08
PCDHGA9-202ENST00000616887 STRCP1A6NGW2 1772 aa14.51□□□□□ -0.09
PCDHGA9-202ENST00000616887 DZIP1LQ8IYY4 767 aaKnown RBP14.51□□□□□ -0.09
PCDHGA9-202ENST00000616887 MVPQ14764 893 aaKnown RBP14.51□□□□□ -0.09
PCDHGA9-202ENST00000616887 MBIPQ9NS73 344 aa14.51□□□□□ -0.09
PCDHGA9-202ENST00000616887 USP31Q70CQ4 1352 aa14.49□□□□□ -0.09
PCDHGA9-202ENST00000616887 HSP90AA2PQ14568 343 aaPredicted RBP14.49□□□□□ -0.09
PCDHGA9-202ENST00000616887 C8orf34Q49A92 452 aa14.49□□□□□ -0.09
PCDHGA9-202ENST00000616887 ITPRIPQ8IWB1 547 aa14.49□□□□□ -0.09
PCDHGA9-202ENST00000616887 NWD1Q149M9 1564 aa14.49□□□□□ -0.09
PCDHGA9-202ENST00000616887 CT47B1P0C2W7 299 aaPredicted RBP14.48□□□□□ -0.09
PCDHGA9-202ENST00000616887 KRT24Q2M2I5 525 aa14.48□□□□□ -0.09
PCDHGA9-202ENST00000616887 ATF7IPQ6VMQ6 1270 aa14.48□□□□□ -0.09
PCDHGA9-202ENST00000616887 MCM10Q7L590 875 aa14.48□□□□□ -0.09
PCDHGA9-202ENST00000616887 TMEM57Q8N5G2 664 aa14.48□□□□□ -0.09
PCDHGA9-202ENST00000616887 ANKARQ7Z5J8 1434 aa14.48□□□□□ -0.09
PCDHGA9-202ENST00000616887 NLRP6P59044 892 aa14.48□□□□□ -0.09
PCDHGA9-202ENST00000616887 NALCNQ8IZF0 1738 aa14.47□□□□□ -0.09
PCDHGA9-202ENST00000616887 FOXO3O43524 673 aa14.47□□□□□ -0.09
PCDHGA9-202ENST00000616887 C14orf37Q86TY3 774 aa14.47□□□□□ -0.09
PCDHGA9-202ENST00000616887 C8orf58Q8NAV2 365 aa14.47□□□□□ -0.09
PCDHGA9-202ENST00000616887 NAP1L5Q96NT1 182 aaPredicted RBP14.47□□□□□ -0.09
PCDHGA9-202ENST00000616887 PIK3C2AO00443 1686 aa14.47□□□□□ -0.09
PCDHGA9-202ENST00000616887 VAMP4O75379 141 aa14.46□□□□□ -0.09
PCDHGA9-202ENST00000616887 DLG5Q8TDM6 1919 aa14.46□□□□□ -0.09
PCDHGA9-202ENST00000616887 TTC21AQ8NDW8 1320 aa14.46□□□□□ -0.09
PCDHGA9-202ENST00000616887 LTBP4Q8N2S1 1624 aa14.46□□□□□ -0.09
PCDHGA9-202ENST00000616887 ZNF853P0CG23 659 aa14.46□□□□□ -0.09
PCDHGA9-202ENST00000616887 IFT57Q9NWB7 429 aa14.45□□□□□ -0.1
PCDHGA9-202ENST00000616887 ABTB2Q8N961 1025 aa14.45□□□□□ -0.1
PCDHGA9-202ENST00000616887 AMPHP49418 695 aa14.44□□□□□ -0.1
PCDHGA9-202ENST00000616887 GNAI1P63096 354 aa14.44□□□□□ -0.1
PCDHGA9-202ENST00000616887 PROSER2Q86WR7 435 aaPredicted RBP14.44□□□□□ -0.1
PCDHGA9-202ENST00000616887 CFAP44Q96MT7 982 aa14.44□□□□□ -0.1
PCDHGA9-202ENST00000616887 FMN2Q9NZ56 1722 aa14.43□□□□□ -0.1
PCDHGA9-202ENST00000616887 XPCQ01831 940 aaPredicted RBP14.43□□□□□ -0.1
PCDHGA9-202ENST00000616887 TWISTNBQ3B726 338 aaPredicted RBP14.43□□□□□ -0.1
PCDHGA9-202ENST00000616887 FAM161AQ3B820 660 aa14.43□□□□□ -0.1
PCDHGA9-202ENST00000616887 LTV1Q96GA3 475 aaPredicted RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms