RNA–Protein interactions for RNA: ENST00000616552.4

MCM3-207, Transcript of minichromosome maintenance complex component 3, humanhuman

TSL 1 (best) BASIC

Gene MCM3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-207ENST00000616552 DEPDC5O75140 1603 aa11.67□□□□□ -0.54
MCM3-207ENST00000616552 CLTCL1P53675 1640 aa11.67□□□□□ -0.54
MCM3-207ENST00000616552 KIF16BQ96L93 1317 aa11.67□□□□□ -0.54
MCM3-207ENST00000616552 CBX1P83916 185 aa11.67□□□□□ -0.54
MCM3-207ENST00000616552 FAM69CQ0P6D2 419 aa11.67□□□□□ -0.54
MCM3-207ENST00000616552 DNTTIP2Q5QJE6 756 aaKnown RBP11.67□□□□□ -0.54
MCM3-207ENST00000616552 TRPM2O94759 1503 aa11.67□□□□□ -0.54
MCM3-207ENST00000616552 FAM83GA6ND36 823 aa11.66□□□□□ -0.54
MCM3-207ENST00000616552 LARP6Q9BRS8 491 aaKnown RBP11.66□□□□□ -0.54
MCM3-207ENST00000616552 ARHGAP31Q2M1Z3 1444 aa11.66□□□□□ -0.54
MCM3-207ENST00000616552 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.66□□□□□ -0.542e-10■■■□□ 17.2
MCM3-207ENST00000616552 NOS1P29475 1434 aa11.66□□□□□ -0.54
MCM3-207ENST00000616552 PTMAP06454 111 aaKnown RBP11.65□□□□□ -0.54
MCM3-207ENST00000616552 ZKSCAN5Q9Y2L8 839 aa11.65□□□□□ -0.54
MCM3-207ENST00000616552 SRPK2P78362 688 aaKnown RBP11.65□□□□□ -0.54
MCM3-207ENST00000616552 PLCB2Q00722 1185 aa11.65□□□□□ -0.54
MCM3-207ENST00000616552 PLEKHM2Q8IWE5 1019 aa11.65□□□□□ -0.54
MCM3-207ENST00000616552 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.65□□□□□ -0.54
MCM3-207ENST00000616552 SPDYE4A6NLX3 237 aa11.65□□□□□ -0.54
MCM3-207ENST00000616552 ZNF445P59923 1031 aa11.65□□□□□ -0.54
MCM3-207ENST00000616552 TTC12Q9H892 705 aaPredicted RBP11.65□□□□□ -0.54
MCM3-207ENST00000616552 GADD45BO75293 160 aaPredicted RBP11.64□□□□□ -0.55
MCM3-207ENST00000616552 PRKAR2BP31323 418 aa11.64□□□□□ -0.55
MCM3-207ENST00000616552 CDC45O75419 566 aa11.64□□□□□ -0.55
MCM3-207ENST00000616552 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.64□□□□□ -0.55
MCM3-207ENST00000616552 IFT172Q9UG01 1749 aa11.64□□□□□ -0.55
MCM3-207ENST00000616552 PDLIM2Q96JY6 352 aa11.64□□□□□ -0.55
MCM3-207ENST00000616552 USP26Q9BXU7 913 aa11.64□□□□□ -0.55
MCM3-207ENST00000616552 SOX12O15370 315 aa11.63□□□□□ -0.55
MCM3-207ENST00000616552 EFCAB2Q5VUJ9 269 aa11.63□□□□□ -0.55
MCM3-207ENST00000616552 C8orf58Q8NAV2 365 aa11.63□□□□□ -0.55
MCM3-207ENST00000616552 ADGRL1O94910 1474 aa11.63□□□□□ -0.55
MCM3-207ENST00000616552 IPO8O15397 1037 aaKnown RBP11.63□□□□□ -0.55
MCM3-207ENST00000616552 GGT6Q6P531 493 aa11.63□□□□□ -0.55
MCM3-207ENST00000616552 REREQ9P2R6 1566 aa11.63□□□□□ -0.55
MCM3-207ENST00000616552 MINK1Q8N4C8 1332 aaPredicted RBP11.63□□□□□ -0.55
MCM3-207ENST00000616552 ZNF500O60304 480 aaPredicted RBP11.62□□□□□ -0.55
MCM3-207ENST00000616552 CYP2E1P05181 493 aaPredicted RBP11.62□□□□□ -0.55
MCM3-207ENST00000616552 VAMP4O75379 141 aa11.62□□□□□ -0.55
MCM3-207ENST00000616552 SDSP20132 328 aa11.62□□□□□ -0.55
MCM3-207ENST00000616552 ZNF710Q8N1W2 664 aa11.62□□□□□ -0.55
MCM3-207ENST00000616552 ZNF428Q96B54 188 aa11.62□□□□□ -0.55
MCM3-207ENST00000616552 DIP2BQ9P265 1576 aa11.62□□□□□ -0.55
MCM3-207ENST00000616552 SBNO2Q9Y2G9 1366 aa11.61□□□□□ -0.55
MCM3-207ENST00000616552 ZC3H13Q5T200 1668 aaKnown RBP11.61□□□□□ -0.55
MCM3-207ENST00000616552 MRPL50Q8N5N7 158 aaKnown RBP11.61□□□□□ -0.55
MCM3-207ENST00000616552 USP25Q9UHP3 1055 aa11.61□□□□□ -0.55
MCM3-207ENST00000616552 VWDEQ8N2E2 1590 aa11.61□□□□□ -0.55
MCM3-207ENST00000616552 CFAP65Q6ZU64 1925 aaKnown RBP11.61□□□□□ -0.55
MCM3-207ENST00000616552 MYOM2P54296 1465 aa11.61□□□□□ -0.55
MCM3-207ENST00000616552 FYB1O15117 783 aa11.61□□□□□ -0.55
MCM3-207ENST00000616552 NEK4P51957 841 aa11.61□□□□□ -0.55
MCM3-207ENST00000616552 ATP2B3Q16720 1220 aa11.61□□□□□ -0.55
MCM3-207ENST00000616552 INO80Q9ULG1 1556 aaPredicted RBP11.6□□□□□ -0.55
MCM3-207ENST00000616552 ABCA6Q8N139 1617 aa11.6□□□□□ -0.55
MCM3-207ENST00000616552 LRSAM1Q6UWE0 723 aa11.6□□□□□ -0.55
MCM3-207ENST00000616552 UPF3BQ9BZI7 483 aaKnown RBP11.6□□□□□ -0.55
MCM3-207ENST00000616552 KIF13AQ9H1H9 1805 aa11.6□□□□□ -0.55
MCM3-207ENST00000616552 PLPPR3Q6T4P5 718 aa11.6□□□□□ -0.55
MCM3-207ENST00000616552 MBIPQ9NS73 344 aa11.6□□□□□ -0.55
MCM3-207ENST00000616552 PALD1Q9ULE6 856 aa11.6□□□□□ -0.55
MCM3-207ENST00000616552 ADGRB2O60241 1585 aa11.6□□□□□ -0.55
MCM3-207ENST00000616552 TET3O43151 1660 aa11.6□□□□□ -0.55
MCM3-207ENST00000616552 ARAP3Q8WWN8 1544 aa11.6□□□□□ -0.55
MCM3-207ENST00000616552 TSPOAP1O95153 1857 aa11.59□□□□□ -0.55
MCM3-207ENST00000616552 SETBP1Q9Y6X0 1596 aa11.59□□□□□ -0.55
MCM3-207ENST00000616552 DIAPH1O60610 1272 aaKnown RBP11.59□□□□□ -0.55
MCM3-207ENST00000616552 PTMSP20962 102 aa11.59□□□□□ -0.55
MCM3-207ENST00000616552 TERF1P54274 439 aa11.59□□□□□ -0.55
MCM3-207ENST00000616552 RABEP1Q15276 862 aa11.59□□□□□ -0.55
MCM3-207ENST00000616552 ZRANB1Q9UGI0 708 aa11.59□□□□□ -0.55
MCM3-207ENST00000616552 YEATS2Q9ULM3 1422 aa11.59□□□□□ -0.55
MCM3-207ENST00000616552 A0A1W2PP64 1363 aa11.59□□□□□ -0.55
MCM3-207ENST00000616552 NUCB2P80303 420 aa11.59□□□□□ -0.55
MCM3-207ENST00000616552 TTC22Q5TAA0 569 aa11.59□□□□□ -0.55
MCM3-207ENST00000616552 GCC1Q96CN9 775 aa11.59□□□□□ -0.55
MCM3-207ENST00000616552 PPRC1Q5VV67 1664 aaKnown RBP11.58□□□□□ -0.56
MCM3-207ENST00000616552 SASS6Q6UVJ0 657 aa11.58□□□□□ -0.56
MCM3-207ENST00000616552 CLEC17AQ6ZS10 378 aa11.58□□□□□ -0.56
MCM3-207ENST00000616552 ZSCAN20P17040 1043 aaPredicted RBP11.58□□□□□ -0.56
MCM3-207ENST00000616552 NRXN1Q9ULB1 1477 aa11.57□□□□□ -0.56
MCM3-207ENST00000616552 TWISTNBQ3B726 338 aaPredicted RBP11.57□□□□□ -0.56
MCM3-207ENST00000616552 TMX3Q96JJ7 454 aa11.57□□□□□ -0.56
MCM3-207ENST00000616552 MIS18AQ9NYP9 233 aa11.57□□□□□ -0.56
MCM3-207ENST00000616552 EMILIN1Q9Y6C2 1016 aa11.57□□□□□ -0.56
MCM3-207ENST00000616552 IBTKQ9P2D0 1353 aaPredicted RBP11.57□□□□□ -0.56
MCM3-207ENST00000616552 PPP4R3BQ5MIZ7 849 aa11.57□□□□□ -0.56
MCM3-207ENST00000616552 DYNC1I1O14576 645 aa11.56□□□□□ -0.56
MCM3-207ENST00000616552 HCLS1P14317 486 aaPredicted RBP11.56□□□□□ -0.56
MCM3-207ENST00000616552 MEIS3Q99687 375 aa11.56□□□□□ -0.56
MCM3-207ENST00000616552 C14orf93Q9H972 538 aaKnown RBP11.56□□□□□ -0.56
MCM3-207ENST00000616552 ABCC11Q96J66 1382 aa11.56□□□□□ -0.56
MCM3-207ENST00000616552 NUTM2FA1L443 756 aa11.56□□□□□ -0.56
MCM3-207ENST00000616552 SPC24Q8NBT2 197 aa11.56□□□□□ -0.56
MCM3-207ENST00000616552 MAP3K4Q9Y6R4 1608 aa11.55□□□□□ -0.56
MCM3-207ENST00000616552 CT47B1P0C2W7 299 aaPredicted RBP11.55□□□□□ -0.56
MCM3-207ENST00000616552 MAPK8IP2Q13387 824 aaPredicted RBP11.55□□□□□ -0.56
MCM3-207ENST00000616552 CCDC39Q9UFE4 941 aa11.55□□□□□ -0.56
MCM3-207ENST00000616552 ZBTB22O15209 634 aa11.55□□□□□ -0.56
MCM3-207ENST00000616552 MAP4K4O95819 1239 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms