RNA–Protein interactions for RNA: ENST00000616502.4

EPHB4-210, Transcript of EPH receptor B4, humanhuman

TSL 5 BASIC

Gene EPHB4, Length 3,737 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-210ENST00000616502 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.57■□□□□ 0.4
EPHB4-210ENST00000616502 UHRF1BP1LA0JNW5 1464 aa17.57■□□□□ 0.4
EPHB4-210ENST00000616502 FOXO3O43524 673 aa17.57■□□□□ 0.4
EPHB4-210ENST00000616502 CSB-PGBD3P0DP91 1061 aa17.57■□□□□ 0.4
EPHB4-210ENST00000616502 ERBB4Q15303 1308 aa17.57■□□□□ 0.4
EPHB4-210ENST00000616502 POLKQ9UBT6 870 aa17.56■□□□□ 0.4
EPHB4-210ENST00000616502 POLR1AO95602 1720 aaPredicted RBP17.56■□□□□ 0.4
EPHB4-210ENST00000616502 SYCE3A1L190 88 aa17.55■□□□□ 0.4
EPHB4-210ENST00000616502 PDCL3Q9H2J4 239 aa17.55■□□□□ 0.4
EPHB4-210ENST00000616502 PRDM10Q9NQV6 1147 aa17.55■□□□□ 0.4
EPHB4-210ENST00000616502 CLASP1Q7Z460 1538 aa17.55■□□□□ 0.4
EPHB4-210ENST00000616502 HDAC1Q13547 482 aaPredicted RBP17.55■□□□□ 0.4
EPHB4-210ENST00000616502 ZMYM3Q14202 1370 aa17.55■□□□□ 0.4
EPHB4-210ENST00000616502 TSPYL6Q8N831 410 aa17.55■□□□□ 0.4
EPHB4-210ENST00000616502 RILPL2Q969X0 211 aa17.55■□□□□ 0.4
EPHB4-210ENST00000616502 CLTCL1P53675 1640 aa17.55■□□□□ 0.4
EPHB4-210ENST00000616502 ACEP12821 1306 aa17.54■□□□□ 0.4
EPHB4-210ENST00000616502 RAB3GAP1Q15042 981 aa17.54■□□□□ 0.4
EPHB4-210ENST00000616502 NUCB1Q02818 461 aa17.53■□□□□ 0.4
EPHB4-210ENST00000616502 GCC1Q96CN9 775 aa17.53■□□□□ 0.4
EPHB4-210ENST00000616502 NEK4P51957 841 aa17.53■□□□□ 0.4
EPHB4-210ENST00000616502 INTS3Q68E01 1043 aaKnown RBP17.53■□□□□ 0.4
EPHB4-210ENST00000616502 TAOK2Q9UL54 1235 aa17.53■□□□□ 0.4
EPHB4-210ENST00000616502 RABEP1Q15276 862 aa17.52■□□□□ 0.4
EPHB4-210ENST00000616502 CCDC9Q9Y3X0 531 aaKnown RBP17.52■□□□□ 0.4
EPHB4-210ENST00000616502 ERVK-7P63135 1459 aa17.52■□□□□ 0.4
EPHB4-210ENST00000616502 MCCP23508 829 aa17.52■□□□□ 0.4
EPHB4-210ENST00000616502 ZC3H6P61129 1189 aaKnown RBP17.52■□□□□ 0.4
EPHB4-210ENST00000616502 SMC5Q8IY18 1101 aa17.52■□□□□ 0.39
EPHB4-210ENST00000616502 BCL11BQ9C0K0 894 aaPredicted RBP17.52■□□□□ 0.39
EPHB4-210ENST00000616502 BMP2KLQ5H9B9 411 aa17.51■□□□□ 0.39
EPHB4-210ENST00000616502 PTPRTO14522 1441 aa17.51■□□□□ 0.39
EPHB4-210ENST00000616502 CD2BP2O95400 341 aaKnown RBP17.51■□□□□ 0.39
EPHB4-210ENST00000616502 TWISTNBQ3B726 338 aaPredicted RBP17.51■□□□□ 0.39
EPHB4-210ENST00000616502 SYAP1Q96A49 352 aaPredicted RBP17.51■□□□□ 0.39
EPHB4-210ENST00000616502 CT47B1P0C2W7 299 aaPredicted RBP17.51■□□□□ 0.39
EPHB4-210ENST00000616502 TSPYL4Q9UJ04 414 aa17.5■□□□□ 0.39
EPHB4-210ENST00000616502 POLR3AO14802 1390 aaPredicted RBP17.5■□□□□ 0.39
EPHB4-210ENST00000616502 SMARCA5O60264 1052 aaPredicted RBP17.5■□□□□ 0.39
EPHB4-210ENST00000616502 KLHL40Q2TBA0 621 aa17.5■□□□□ 0.39
EPHB4-210ENST00000616502 CFAP44Q96MT7 982 aa17.5■□□□□ 0.39
EPHB4-210ENST00000616502 RIMS2Q9UQ26 1411 aa17.5■□□□□ 0.39
EPHB4-210ENST00000616502 E9PCH4 1651 aa17.5■□□□□ 0.39
EPHB4-210ENST00000616502 ATAD2Q6PL18 1390 aa17.5■□□□□ 0.39
EPHB4-210ENST00000616502 SNX21Q969T3 373 aa17.5■□□□□ 0.39
EPHB4-210ENST00000616502 ANO2Q9NQ90 1003 aa17.5■□□□□ 0.39
EPHB4-210ENST00000616502 ZBTB40Q9NUA8 1239 aa17.5■□□□□ 0.39
EPHB4-210ENST00000616502 A0A0U1RQG5 324 aaPredicted RBP17.49■□□□□ 0.39
EPHB4-210ENST00000616502 F6X3S4 739 aa17.49■□□□□ 0.39
EPHB4-210ENST00000616502 REC8O95072 547 aa17.49■□□□□ 0.39
EPHB4-210ENST00000616502 ZSCAN23Q3MJ62 389 aa17.49■□□□□ 0.39
EPHB4-210ENST00000616502 YTHDC2Q9H6S0 1430 aaKnown RBP17.48■□□□□ 0.39
EPHB4-210ENST00000616502 PRIM1P49642 420 aaKnown RBP17.48■□□□□ 0.39
EPHB4-210ENST00000616502 CSPP1Q1MSJ5 1256 aa17.48■□□□□ 0.39
EPHB4-210ENST00000616502 METP08581 1390 aa17.48■□□□□ 0.39
EPHB4-210ENST00000616502 KCNA6P17658 529 aa17.48■□□□□ 0.39
EPHB4-210ENST00000616502 CHAF1AQ13111 956 aaPredicted RBP17.48■□□□□ 0.39
EPHB4-210ENST00000616502 THEMISQ8N1K5 641 aaPredicted RBP17.48■□□□□ 0.39
EPHB4-210ENST00000616502 CHMP3Q9Y3E7 222 aa17.48■□□□□ 0.39
EPHB4-210ENST00000616502 C16orf71Q8IYS4 520 aaPredicted RBP17.48■□□□□ 0.39
EPHB4-210ENST00000616502 CHAMP1Q96JM3 812 aa17.48■□□□□ 0.39
EPHB4-210ENST00000616502 API5Q9BZZ5 524 aaKnown RBP17.47■□□□□ 0.39
EPHB4-210ENST00000616502 DRC7Q8IY82 874 aa17.47■□□□□ 0.39
EPHB4-210ENST00000616502 RBM25P49756 843 aaKnown RBP17.47■□□□□ 0.39
EPHB4-210ENST00000616502 DDX17Q92841 729 aaKnown RBP17.47■□□□□ 0.39
EPHB4-210ENST00000616502 CCDC39Q9UFE4 941 aa17.47■□□□□ 0.39
EPHB4-210ENST00000616502 ANKRD36BQ8N2N9 1353 aa17.47■□□□□ 0.39
EPHB4-210ENST00000616502 TRPM1Q7Z4N2 1603 aa17.46■□□□□ 0.39
EPHB4-210ENST00000616502 ANXA1P04083 346 aa17.46■□□□□ 0.39
EPHB4-210ENST00000616502 GDPD2Q9HCC8 539 aa17.46■□□□□ 0.39
EPHB4-210ENST00000616502 FKBP5Q13451 457 aaPredicted RBP17.46■□□□□ 0.39
EPHB4-210ENST00000616502 ZGPATQ8N5A5 531 aaKnown RBP17.46■□□□□ 0.39
EPHB4-210ENST00000616502 SLC4A2P04920 1241 aa17.45■□□□□ 0.38
EPHB4-210ENST00000616502 HSPA2P54652 639 aa17.45■□□□□ 0.38
EPHB4-210ENST00000616502 GNAI1P63096 354 aa17.45■□□□□ 0.38
EPHB4-210ENST00000616502 PROSER2Q86WR7 435 aaPredicted RBP17.45■□□□□ 0.38
EPHB4-210ENST00000616502 IQGAP3Q86VI3 1631 aa17.45■□□□□ 0.38
EPHB4-210ENST00000616502 TNRQ92752 1358 aa17.45■□□□□ 0.38
EPHB4-210ENST00000616502 AIMP1Q12904 312 aaKnown RBP17.45■□□□□ 0.38
EPHB4-210ENST00000616502 OS9Q13438 667 aaPredicted RBP17.45■□□□□ 0.38
EPHB4-210ENST00000616502 C8orf58Q8NAV2 365 aa17.45■□□□□ 0.38
EPHB4-210ENST00000616502 TRPM2O94759 1503 aa17.44■□□□□ 0.38
EPHB4-210ENST00000616502 OFD1O75665 1012 aa17.44■□□□□ 0.38
EPHB4-210ENST00000616502 STK31Q9BXU1 1019 aa17.44■□□□□ 0.38
EPHB4-210ENST00000616502 RBSNQ9H1K0 784 aa17.44■□□□□ 0.38
EPHB4-210ENST00000616502 PPIP5K1Q6PFW1 1433 aa17.44■□□□□ 0.38
EPHB4-210ENST00000616502 HMMRO75330 724 aa17.44■□□□□ 0.38
EPHB4-210ENST00000616502 CCDC27Q2M243 656 aa17.44■□□□□ 0.38
EPHB4-210ENST00000616502 SHROOM2Q13796 1616 aa17.43■□□□□ 0.38
EPHB4-210ENST00000616502 MAP7D2Q96T17 732 aa17.43■□□□□ 0.38
EPHB4-210ENST00000616502 PKP1Q13835 747 aa17.43■□□□□ 0.38
EPHB4-210ENST00000616502 NFE2L2Q16236 605 aa17.43■□□□□ 0.38
EPHB4-210ENST00000616502 EIF2AK4Q9P2K8 1649 aaKnown RBP17.43■□□□□ 0.38
EPHB4-210ENST00000616502 FCHSD2O94868 740 aa17.43■□□□□ 0.38
EPHB4-210ENST00000616502 MBIPQ9NS73 344 aa17.43■□□□□ 0.38
EPHB4-210ENST00000616502 ZHX1Q9UKY1 873 aaPredicted RBP17.43■□□□□ 0.38
EPHB4-210ENST00000616502 TRIM35Q9UPQ4 493 aa17.43■□□□□ 0.38
EPHB4-210ENST00000616502 NPC1L1Q9UHC9 1359 aa17.42■□□□□ 0.38
EPHB4-210ENST00000616502 ZNF830Q96NB3 372 aaPredicted RBP17.42■□□□□ 0.38
EPHB4-210ENST00000616502 TSPY26PQ9H489 355 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms