RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 PHF8Q9UPP1 1060 aa16.21■□□□□ 0.19
PPP4R3B-206ENST00000616407 FRAT2O75474 233 aaPredicted RBP16.21■□□□□ 0.18
PPP4R3B-206ENST00000616407 USHBP1Q8N6Y0 703 aa16.21■□□□□ 0.18
PPP4R3B-206ENST00000616407 CROCC2H7BZ55 1655 aa16.21■□□□□ 0.18
PPP4R3B-206ENST00000616407 PTMSP20962 102 aa16.2■□□□□ 0.18
PPP4R3B-206ENST00000616407 CCT4P50991 539 aaKnown RBP16.2■□□□□ 0.18
PPP4R3B-206ENST00000616407 SBNO2Q9Y2G9 1366 aa16.2■□□□□ 0.18
PPP4R3B-206ENST00000616407 GNAT3A8MTJ3 354 aa16.2■□□□□ 0.18
PPP4R3B-206ENST00000616407 SURF6O75683 361 aaKnown RBP16.2■□□□□ 0.18
PPP4R3B-206ENST00000616407 MLH3Q9UHC1 1453 aa16.2■□□□□ 0.18
PPP4R3B-206ENST00000616407 ZMYM4Q5VZL5 1548 aa16.2■□□□□ 0.18
PPP4R3B-206ENST00000616407 GORABQ5T7V8 394 aa16.2■□□□□ 0.18
PPP4R3B-206ENST00000616407 AEBP1Q8IUX7 1158 aa16.2■□□□□ 0.18
PPP4R3B-206ENST00000616407 ERVK-7P63135 1459 aa16.2■□□□□ 0.18
PPP4R3B-206ENST00000616407 FOXO3O43524 673 aa16.19■□□□□ 0.18
PPP4R3B-206ENST00000616407 INSRP06213 1382 aa16.19■□□□□ 0.18
PPP4R3B-206ENST00000616407 IQGAP3Q86VI3 1631 aa16.19■□□□□ 0.18
PPP4R3B-206ENST00000616407 PRDM15P57071 1507 aaPredicted RBP16.19■□□□□ 0.18
PPP4R3B-206ENST00000616407 DDX11L8A8MPP1 907 aa16.19■□□□□ 0.18
PPP4R3B-206ENST00000616407 TAF7LQ5H9L4 462 aa16.19■□□□□ 0.18
PPP4R3B-206ENST00000616407 GOLGA6L4A6NEF3 574 aa16.18■□□□□ 0.18
PPP4R3B-206ENST00000616407 IFIT2P09913 472 aaKnown RBP16.18■□□□□ 0.18
PPP4R3B-206ENST00000616407 RIC3Q7Z5B4 369 aa16.18■□□□□ 0.18
PPP4R3B-206ENST00000616407 DIAPH3Q9NSV4 1193 aa16.18■□□□□ 0.18
PPP4R3B-206ENST00000616407 ZC3H6P61129 1189 aaKnown RBP16.18■□□□□ 0.18
PPP4R3B-206ENST00000616407 NPHP1O15259 732 aa16.17■□□□□ 0.18
PPP4R3B-206ENST00000616407 RPAP2Q8IXW5 612 aaPredicted RBP16.17■□□□□ 0.18
PPP4R3B-206ENST00000616407 F6X3S4 739 aa16.16■□□□□ 0.18
PPP4R3B-206ENST00000616407 G3BP1Q13283 466 aaKnown RBP eCLIP16.16■□□□□ 0.18
PPP4R3B-206ENST00000616407 EIF4A2Q14240 407 aaKnown RBP16.16■□□□□ 0.18
PPP4R3B-206ENST00000616407 HSP90AB4PQ58FF6 505 aa16.16■□□□□ 0.18
PPP4R3B-206ENST00000616407 UNC13BO14795 1591 aa16.15■□□□□ 0.18
PPP4R3B-206ENST00000616407 FOXD4L6Q3SYB3 417 aaPredicted RBP16.15■□□□□ 0.18
PPP4R3B-206ENST00000616407 FOXD4L3Q6VB84 417 aaPredicted RBP16.15■□□□□ 0.18
PPP4R3B-206ENST00000616407 MYOM2P54296 1465 aa16.15■□□□□ 0.18
PPP4R3B-206ENST00000616407 C8orf58Q8NAV2 365 aa16.15■□□□□ 0.18
PPP4R3B-206ENST00000616407 SRCIN1Q9C0H9 1055 aa16.15■□□□□ 0.18
PPP4R3B-206ENST00000616407 DDX49Q9Y6V7 483 aaKnown RBP16.15■□□□□ 0.18
PPP4R3B-206ENST00000616407 KCNH5Q8NCM2 988 aa16.15■□□□□ 0.18
PPP4R3B-206ENST00000616407 TSPYL6Q8N831 410 aa16.14■□□□□ 0.17
PPP4R3B-206ENST00000616407 RSPH6AQ9H0K4 717 aa16.14■□□□□ 0.17
PPP4R3B-206ENST00000616407 ARAP3Q8WWN8 1544 aa16.13■□□□□ 0.17
PPP4R3B-206ENST00000616407 TAF7Q15545 349 aaPredicted RBP16.13■□□□□ 0.17
PPP4R3B-206ENST00000616407 BTBD11A6QL63 1104 aa16.13■□□□□ 0.17
PPP4R3B-206ENST00000616407 ZRSR1Q15695 479 aaKnown RBP16.13■□□□□ 0.17
PPP4R3B-206ENST00000616407 TRIM35Q9UPQ4 493 aa16.13■□□□□ 0.17
PPP4R3B-206ENST00000616407 EXOC6BQ9Y2D4 811 aa16.13■□□□□ 0.17
PPP4R3B-206ENST00000616407 TATP17735 454 aaPredicted RBP16.12■□□□□ 0.17
PPP4R3B-206ENST00000616407 RUFY2Q8WXA3 655 aa16.12■□□□□ 0.17
PPP4R3B-206ENST00000616407 LRRCC1Q9C099 1032 aa16.12■□□□□ 0.17
PPP4R3B-206ENST00000616407 KDM5AP29375 1690 aaKnown RBP16.12■□□□□ 0.17
PPP4R3B-206ENST00000616407 VAMP4O75379 141 aa16.12■□□□□ 0.17
PPP4R3B-206ENST00000616407 CLASRPQ8N2M8 674 aaKnown RBP16.12■□□□□ 0.17
PPP4R3B-206ENST00000616407 TRPM1Q7Z4N2 1603 aa16.11■□□□□ 0.17
PPP4R3B-206ENST00000616407 SMARCA5O60264 1052 aaPredicted RBP16.11■□□□□ 0.17
PPP4R3B-206ENST00000616407 C8orf34Q49A92 452 aa16.11■□□□□ 0.17
PPP4R3B-206ENST00000616407 TET3O43151 1660 aa16.1■□□□□ 0.17
PPP4R3B-206ENST00000616407 ZFYVE9O95405 1425 aa16.1■□□□□ 0.17
PPP4R3B-206ENST00000616407 TTC21AQ8NDW8 1320 aa16.1■□□□□ 0.17
PPP4R3B-206ENST00000616407 HDAC1Q13547 482 aaPredicted RBP16.1■□□□□ 0.17
PPP4R3B-206ENST00000616407 CLTCL1P53675 1640 aa16.1■□□□□ 0.17
PPP4R3B-206ENST00000616407 ERC2O15083 957 aa16.1■□□□□ 0.17
PPP4R3B-206ENST00000616407 MRPL50Q8N5N7 158 aaKnown RBP16.1■□□□□ 0.17
PPP4R3B-206ENST00000616407 ARHGAP45Q92619 1136 aa16.1■□□□□ 0.17
PPP4R3B-206ENST00000616407 CFAP74Q9C0B2 1584 aa16.09■□□□□ 0.17
PPP4R3B-206ENST00000616407 KRT24Q2M2I5 525 aa16.09■□□□□ 0.17
PPP4R3B-206ENST00000616407 IL1RAPL2Q9NP60 686 aa16.09■□□□□ 0.17
PPP4R3B-206ENST00000616407 CLASP1Q7Z460 1538 aa16.09■□□□□ 0.17
PPP4R3B-206ENST00000616407 SYTL4Q96C24 671 aaPredicted RBP16.09■□□□□ 0.17
PPP4R3B-206ENST00000616407 HSP90B1P14625 803 aaKnown RBP16.09■□□□□ 0.17
PPP4R3B-206ENST00000616407 KCNA6P17658 529 aa16.09■□□□□ 0.17
PPP4R3B-206ENST00000616407 IL13P35225 146 aa16.09■□□□□ 0.17
PPP4R3B-206ENST00000616407 MPRIPQ6WCQ1 1025 aa16.09■□□□□ 0.17
PPP4R3B-206ENST00000616407 NAP1L5Q96NT1 182 aaPredicted RBP16.09■□□□□ 0.17
PPP4R3B-206ENST00000616407 SRGAP3O43295 1099 aa16.08■□□□□ 0.17
PPP4R3B-206ENST00000616407 ZNF521Q96K83 1311 aa16.08■□□□□ 0.17
PPP4R3B-206ENST00000616407 NEK4P51957 841 aa16.08■□□□□ 0.16
PPP4R3B-206ENST00000616407 EFCAB6Q5THR3 1501 aa16.08■□□□□ 0.16
PPP4R3B-206ENST00000616407 SKOR2Q2VWA4 1001 aaPredicted RBP16.08■□□□□ 0.16
PPP4R3B-206ENST00000616407 TBX22Q9Y458 520 aa16.08■□□□□ 0.16
PPP4R3B-206ENST00000616407 SYNMO15061 1565 aa16.08■□□□□ 0.16
PPP4R3B-206ENST00000616407 ZKSCAN1P17029 563 aaPredicted RBP16.08■□□□□ 0.16
PPP4R3B-206ENST00000616407 DNTTIP2Q5QJE6 756 aaKnown RBP16.07■□□□□ 0.16
PPP4R3B-206ENST00000616407 KDM2BQ8NHM5 1336 aa16.07■□□□□ 0.16
PPP4R3B-206ENST00000616407 HECW2Q9P2P5 1572 aa16.07■□□□□ 0.16
PPP4R3B-206ENST00000616407 MYL6BP14649 208 aa16.07■□□□□ 0.16
PPP4R3B-206ENST00000616407 RABEP1Q15276 862 aa16.07■□□□□ 0.16
PPP4R3B-206ENST00000616407 FLIIQ13045 1269 aa16.07■□□□□ 0.16
PPP4R3B-206ENST00000616407 SYAP1Q96A49 352 aaPredicted RBP16.06■□□□□ 0.16
PPP4R3B-206ENST00000616407 STRN4Q9NRL3 753 aa16.06■□□□□ 0.16
PPP4R3B-206ENST00000616407 LTKP29376 864 aa16.06■□□□□ 0.16
PPP4R3B-206ENST00000616407 NUCB2P80303 420 aa16.06■□□□□ 0.16
PPP4R3B-206ENST00000616407 MTHFSDQ2M296 383 aaKnown RBP16.06■□□□□ 0.16
PPP4R3B-206ENST00000616407 MAP3K19Q56UN5 1328 aa16.06■□□□□ 0.16
PPP4R3B-206ENST00000616407 SHROOM2Q13796 1616 aa16.06■□□□□ 0.16
PPP4R3B-206ENST00000616407 TRMT2AQ8IZ69 625 aaKnown RBP16.06■□□□□ 0.16
PPP4R3B-206ENST00000616407 PTPRCP08575 1304 aa16.06■□□□□ 0.16
PPP4R3B-206ENST00000616407 EDC4Q6P2E9 1401 aaKnown RBP16.06■□□□□ 0.16
PPP4R3B-206ENST00000616407 KIF1BO60333 1816 aa16.05■□□□□ 0.16
PPP4R3B-206ENST00000616407 ABCC3O15438 1527 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms