RNA–Protein interactions for RNA: ENST00000615310.4

RET-205, Transcript of ret proto-oncogene, humanhuman

TSL 5 BASIC

Gene RET, Length 4,337 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-205ENST00000615310 SMC3Q9UQE7 1217 aa17.28■□□□□ 0.36
RET-205ENST00000615310 NCKAP5LQ9HCH0 1330 aa17.27■□□□□ 0.36
RET-205ENST00000615310 CAVIN1Q6NZI2 390 aaKnown RBP17.27■□□□□ 0.36
RET-205ENST00000615310 RNF214Q8ND24 703 aa17.27■□□□□ 0.36
RET-205ENST00000615310 MCM4P33991 863 aa17.27■□□□□ 0.36
RET-205ENST00000615310 PHF14O94880 888 aa17.27■□□□□ 0.35
RET-205ENST00000615310 CSPP1Q1MSJ5 1256 aa17.27■□□□□ 0.35
RET-205ENST00000615310 HSP90AB2PQ58FF8 381 aa17.27■□□□□ 0.35
RET-205ENST00000615310 RPAP2Q8IXW5 612 aaPredicted RBP17.27■□□□□ 0.35
RET-205ENST00000615310 POLR3AO14802 1390 aaPredicted RBP17.26■□□□□ 0.35
RET-205ENST00000615310 K7ELQ4 463 aaPredicted RBP17.26■□□□□ 0.35
RET-205ENST00000615310 TULP1O00294 542 aaPredicted RBP17.26■□□□□ 0.35
RET-205ENST00000615310 ATP6V1DQ9Y5K8 247 aa17.26■□□□□ 0.35
RET-205ENST00000615310 SRGAP3O43295 1099 aa17.26■□□□□ 0.35
RET-205ENST00000615310 NRDCO43847 1150 aa17.26■□□□□ 0.35
RET-205ENST00000615310 PRPF40AO75400 957 aaKnown RBP17.26■□□□□ 0.35
RET-205ENST00000615310 ZC3H6P61129 1189 aaKnown RBP17.26■□□□□ 0.35
RET-205ENST00000615310 SIL1Q9H173 461 aa17.26■□□□□ 0.35
RET-205ENST00000615310 C8orf34Q49A92 452 aa17.25■□□□□ 0.35
RET-205ENST00000615310 NSD2O96028 1365 aa17.25■□□□□ 0.35
RET-205ENST00000615310 MBD5Q9P267 1494 aa17.25■□□□□ 0.35
RET-205ENST00000615310 POLKQ9UBT6 870 aa17.25■□□□□ 0.35
RET-205ENST00000615310 GCC2Q8IWJ2 1684 aa17.25■□□□□ 0.35
RET-205ENST00000615310 FOSBP53539 338 aa17.25■□□□□ 0.35
RET-205ENST00000615310 AEBP1Q8IUX7 1158 aa17.25■□□□□ 0.35
RET-205ENST00000615310 ABCC2Q92887 1545 aa17.25■□□□□ 0.35
RET-205ENST00000615310 ZNF518AQ6AHZ1 1483 aa17.25■□□□□ 0.35
RET-205ENST00000615310 SF3A1Q15459 793 aaKnown RBP17.25■□□□□ 0.35
RET-205ENST00000615310 ABCC10Q5T3U5 1492 aa17.24■□□□□ 0.35
RET-205ENST00000615310 ACEP12821 1306 aa17.24■□□□□ 0.35
RET-205ENST00000615310 GNAT3A8MTJ3 354 aa17.24■□□□□ 0.35
RET-205ENST00000615310 GTF2E1P29083 439 aaPredicted RBP17.24■□□□□ 0.35
RET-205ENST00000615310 CNTROBQ8N137 903 aa17.24■□□□□ 0.35
RET-205ENST00000615310 PHACTR3Q96KR7 559 aa17.24■□□□□ 0.35
RET-205ENST00000615310 MYL6BP14649 208 aa17.23■□□□□ 0.35
RET-205ENST00000615310 MRE11P49959 708 aa17.23■□□□□ 0.35
RET-205ENST00000615310 CCDC27Q2M243 656 aa17.23■□□□□ 0.35
RET-205ENST00000615310 FSD1Q9BTV5 496 aa17.23■□□□□ 0.35
RET-205ENST00000615310 PIK3C2GO75747 1445 aa17.23■□□□□ 0.35
RET-205ENST00000615310 ANKLE2Q86XL3 938 aa17.23■□□□□ 0.35
RET-205ENST00000615310 RNF123Q5XPI4 1314 aa17.23■□□□□ 0.35
RET-205ENST00000615310 TSPYL6Q8N831 410 aa17.22■□□□□ 0.35
RET-205ENST00000615310 ISY1Q9ULR0 285 aaKnown RBP17.22■□□□□ 0.35
RET-205ENST00000615310 FOXO3O43524 673 aa17.22■□□□□ 0.35
RET-205ENST00000615310 RSPH6AQ9H0K4 717 aa17.22■□□□□ 0.35
RET-205ENST00000615310 SEC24BO95487 1268 aa17.22■□□□□ 0.35
RET-205ENST00000615310 RNF20Q5VTR2 975 aa17.22■□□□□ 0.35
RET-205ENST00000615310 NUTM1Q86Y26 1132 aa17.22■□□□□ 0.35
RET-205ENST00000615310 C8orf58Q8NAV2 365 aa17.22■□□□□ 0.35
RET-205ENST00000615310 A0A1W2PP64 1363 aa17.21■□□□□ 0.34
RET-205ENST00000615310 BTBD11A6QL63 1104 aa17.2■□□□□ 0.34
RET-205ENST00000615310 KRT24Q2M2I5 525 aa17.2■□□□□ 0.34
RET-205ENST00000615310 CFAP65Q6ZU64 1925 aaKnown RBP17.2■□□□□ 0.34
RET-205ENST00000615310 NASPP49321 788 aaPredicted RBP17.2■□□□□ 0.34
RET-205ENST00000615310 APPP05067 770 aa17.2■□□□□ 0.34
RET-205ENST00000615310 HSP90AA2PQ14568 343 aaPredicted RBP17.2■□□□□ 0.34
RET-205ENST00000615310 UPF3BQ9BZI7 483 aaKnown RBP17.2■□□□□ 0.34
RET-205ENST00000615310 KIF3AQ9Y496 699 aa17.2■□□□□ 0.34
RET-205ENST00000615310 TSHZ3Q63HK5 1081 aa17.19■□□□□ 0.34
RET-205ENST00000615310 TBC1D32Q96NH3 1257 aa17.19■□□□□ 0.34
RET-205ENST00000615310 DNAJC2Q99543 621 aaKnown RBP17.19■□□□□ 0.34
RET-205ENST00000615310 EIF2AK4Q9P2K8 1649 aaKnown RBP17.18■□□□□ 0.34
RET-205ENST00000615310 MPRIPQ6WCQ1 1025 aa17.17■□□□□ 0.34
RET-205ENST00000615310 BICD2Q8TD16 824 aa17.17■□□□□ 0.34
RET-205ENST00000615310 STRN4Q9NRL3 753 aa17.17■□□□□ 0.34
RET-205ENST00000615310 IL16Q14005 1332 aa17.17■□□□□ 0.34
RET-205ENST00000615310 TBC1D9Q6ZT07 1266 aa17.17■□□□□ 0.34
RET-205ENST00000615310 CWC27Q6UX04 472 aaKnown RBP17.17■□□□□ 0.34
RET-205ENST00000615310 TATP17735 454 aaPredicted RBP17.17■□□□□ 0.34
RET-205ENST00000615310 TAF7Q15545 349 aaPredicted RBP17.16■□□□□ 0.34
RET-205ENST00000615310 FIBPO43427 364 aa17.16■□□□□ 0.34
RET-205ENST00000615310 ANXA1P04083 346 aa17.16■□□□□ 0.34
RET-205ENST00000615310 MEIS3Q99687 375 aa17.16■□□□□ 0.34
RET-205ENST00000615310 LRRFIP2Q9Y608 721 aaKnown RBP17.16■□□□□ 0.34
RET-205ENST00000615310 PHF8Q9UPP1 1060 aa17.15■□□□□ 0.34
RET-205ENST00000615310 WASHC4Q2M389 1173 aa17.15■□□□□ 0.34
RET-205ENST00000615310 DDX54Q8TDD1 881 aaKnown RBP17.15■□□□□ 0.34
RET-205ENST00000615310 FLIIQ13045 1269 aa17.15■□□□□ 0.34
RET-205ENST00000615310 HDAC1Q13547 482 aaPredicted RBP17.15■□□□□ 0.34
RET-205ENST00000615310 TTC21BQ7Z4L5 1316 aa17.15■□□□□ 0.34
RET-205ENST00000615310 FAM177BA6PVY3 158 aa17.14■□□□□ 0.33
RET-205ENST00000615310 MPNDQ8N594 471 aa17.14■□□□□ 0.33
RET-205ENST00000615310 MX1P20591 662 aa17.14■□□□□ 0.33
RET-205ENST00000615310 AACSQ86V21 672 aa17.14■□□□□ 0.33
RET-205ENST00000615310 FBXW7Q969H0 707 aa17.14■□□□□ 0.33
RET-205ENST00000615310 CPLX1O14810 134 aa17.14■□□□□ 0.33
RET-205ENST00000615310 VAMP4O75379 141 aa17.14■□□□□ 0.33
RET-205ENST00000615310 EIF4A2Q14240 407 aaKnown RBP17.14■□□□□ 0.33
RET-205ENST00000615310 BMP2KLQ5H9B9 411 aa17.14■□□□□ 0.33
RET-205ENST00000615310 MAST1Q9Y2H9 1570 aa17.13■□□□□ 0.33
RET-205ENST00000615310 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.13■□□□□ 0.33
RET-205ENST00000615310 BECN2A8MW95 431 aa17.13■□□□□ 0.33
RET-205ENST00000615310 CDK11BP21127 795 aaKnown RBP17.13■□□□□ 0.33
RET-205ENST00000615310 MCM2P49736 904 aa17.13■□□□□ 0.33
RET-205ENST00000615310 MAGI2Q86UL8 1455 aa17.13■□□□□ 0.33
RET-205ENST00000615310 PPIP5K1Q6PFW1 1433 aa17.13■□□□□ 0.33
RET-205ENST00000615310 NUCB1Q02818 461 aa17.12■□□□□ 0.33
RET-205ENST00000615310 C16orf71Q8IYS4 520 aaPredicted RBP17.12■□□□□ 0.33
RET-205ENST00000615310 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.12■□□□□ 0.33
RET-205ENST00000615310 FAM43AQ8N2R8 423 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms