RNA–Protein interactions for RNA: ENST00000614860.1

USPL1-203, Transcript of ubiquitin specific peptidase like 1, humanhuman

TSL 1 (best) BASIC

Gene USPL1, Length 4,074 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1-203ENST00000614860 PTPRUQ92729 1446 aa9.05□□□□□ -0.96
USPL1-203ENST00000614860 MEX3CQ5U5Q3 659 aaKnown RBP9.05□□□□□ -0.96
USPL1-203ENST00000614860 NLRP2Q9NX02 1062 aa9.05□□□□□ -0.96
USPL1-203ENST00000614860 PDZRN3Q9UPQ7 1066 aa9.05□□□□□ -0.96
USPL1-203ENST00000614860 CCDC61Q9Y6R9 512 aa9.05□□□□□ -0.96
USPL1-203ENST00000614860 GOLGB1Q14789 3259 aaKnown RBP9.05□□□□□ -0.96
USPL1-203ENST00000614860 TNRQ92752 1358 aa9.05□□□□□ -0.96
USPL1-203ENST00000614860 AMOTL2Q9Y2J4 779 aa9.05□□□□□ -0.96
USPL1-203ENST00000614860 SETD1AO15047 1707 aaKnown RBP9.04□□□□□ -0.96
USPL1-203ENST00000614860 SPATA31D1Q6ZQQ2 1576 aa9.04□□□□□ -0.96
USPL1-203ENST00000614860 NGEFQ8N5V2 710 aa9.04□□□□□ -0.96
USPL1-203ENST00000614860 SPRYD3Q8NCJ5 442 aa9.04□□□□□ -0.96
USPL1-203ENST00000614860 USP19O94966 1318 aa9.04□□□□□ -0.96
USPL1-203ENST00000614860 HSPA2P54652 639 aa9.04□□□□□ -0.96
USPL1-203ENST00000614860 PDE3AQ14432 1141 aa9.04□□□□□ -0.96
USPL1-203ENST00000614860 SULT6B1Q6IMI4 303 aa9.04□□□□□ -0.96
USPL1-203ENST00000614860 SLC4A10Q6U841 1118 aa9.04□□□□□ -0.96
USPL1-203ENST00000614860 MBIPQ9NS73 344 aa9.04□□□□□ -0.96
USPL1-203ENST00000614860 LRRC7Q96NW7 1537 aa9.04□□□□□ -0.96
USPL1-203ENST00000614860 PNPLA6Q8IY17 1366 aa9.03□□□□□ -0.96
USPL1-203ENST00000614860 TMEM2Q9UHN6 1383 aa9.03□□□□□ -0.96
USPL1-203ENST00000614860 DZIP1LQ8IYY4 767 aaKnown RBP9.03□□□□□ -0.96
USPL1-203ENST00000614860 TAOK2Q9UL54 1235 aa9.03□□□□□ -0.96
USPL1-203ENST00000614860 ADAMTS13Q76LX8 1427 aa9.03□□□□□ -0.96
USPL1-203ENST00000614860 MS4A1P11836 297 aa9.03□□□□□ -0.96
USPL1-203ENST00000614860 CCDC27Q2M243 656 aa9.03□□□□□ -0.96
USPL1-203ENST00000614860 NECTIN2Q92692 538 aa9.03□□□□□ -0.96
USPL1-203ENST00000614860 PUS7Q96PZ0 661 aaKnown RBP9.03□□□□□ -0.96
USPL1-203ENST00000614860 EIF4A2Q14240 407 aaKnown RBP9.03□□□□□ -0.96
USPL1-203ENST00000614860 MVPQ14764 893 aaKnown RBP9.03□□□□□ -0.96
USPL1-203ENST00000614860 FAM161AQ3B820 660 aa9.03□□□□□ -0.96
USPL1-203ENST00000614860 STRN4Q9NRL3 753 aa9.03□□□□□ -0.96
USPL1-203ENST00000614860 ZNF428Q96B54 188 aa9.02□□□□□ -0.96
USPL1-203ENST00000614860 CPSF1Q10570 1443 aaKnown RBP9.02□□□□□ -0.97
USPL1-203ENST00000614860 ZKSCAN2Q63HK3 967 aa9.02□□□□□ -0.97
USPL1-203ENST00000614860 KCNA6P17658 529 aa9.02□□□□□ -0.97
USPL1-203ENST00000614860 MED14O60244 1454 aa9.02□□□□□ -0.97
USPL1-203ENST00000614860 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.02□□□□□ -0.97
USPL1-203ENST00000614860 TEFQ10587 303 aa9.01□□□□□ -0.97
USPL1-203ENST00000614860 USHBP1Q8N6Y0 703 aa9.01□□□□□ -0.97
USPL1-203ENST00000614860 USP32Q8NFA0 1604 aa9.01□□□□□ -0.97
USPL1-203ENST00000614860 NSD2O96028 1365 aa9.01□□□□□ -0.97
USPL1-203ENST00000614860 VAMP4O75379 141 aa9.01□□□□□ -0.97
USPL1-203ENST00000614860 FCHSD2O94868 740 aa9.01□□□□□ -0.97
USPL1-203ENST00000614860 DEKP35659 375 aaKnown RBP9.01□□□□□ -0.97
USPL1-203ENST00000614860 ATF7IPQ6VMQ6 1270 aa9.01□□□□□ -0.97
USPL1-203ENST00000614860 STK31Q9BXU1 1019 aa9.01□□□□□ -0.97
USPL1-203ENST00000614860 TTC21BQ7Z4L5 1316 aa9.01□□□□□ -0.97
USPL1-203ENST00000614860 AGLP35573 1532 aa9□□□□□ -0.97
USPL1-203ENST00000614860 DLC1Q96QB1 1528 aa9□□□□□ -0.97
USPL1-203ENST00000614860 EIF2S2P20042 333 aaKnown RBP9□□□□□ -0.97
USPL1-203ENST00000614860 C1orf141Q5JVX7 400 aa9□□□□□ -0.97
USPL1-203ENST00000614860 CHMP3Q9Y3E7 222 aa9□□□□□ -0.97
USPL1-203ENST00000614860 SETD1BQ9UPS6 1966 aaKnown RBP9□□□□□ -0.97
USPL1-203ENST00000614860 ZC3H6P61129 1189 aaKnown RBP9□□□□□ -0.97
USPL1-203ENST00000614860 NFE2L2Q16236 605 aa9□□□□□ -0.97
USPL1-203ENST00000614860 ADGRB2O60241 1585 aa9□□□□□ -0.97
USPL1-203ENST00000614860 ATP7BP35670 1465 aa9□□□□□ -0.97
USPL1-203ENST00000614860 LNPKQ9C0E8 428 aa9□□□□□ -0.97
USPL1-203ENST00000614860 GTF2E1P29083 439 aaPredicted RBP8.99□□□□□ -0.97
USPL1-203ENST00000614860 RGPD8O14715 1765 aaPredicted RBP8.99□□□□□ -0.97
USPL1-203ENST00000614860 FAM135BQ49AJ0 1406 aa8.99□□□□□ -0.97
USPL1-203ENST00000614860 CALD1Q05682 793 aaKnown RBP8.99□□□□□ -0.97
USPL1-203ENST00000614860 SIRT2Q8IXJ6 389 aa8.99□□□□□ -0.97
USPL1-203ENST00000614860 RAPGEF4Q8WZA2 1011 aa8.99□□□□□ -0.97
USPL1-203ENST00000614860 RIMS1Q86UR5 1692 aaKnown RBP8.98□□□□□ -0.97
USPL1-203ENST00000614860 MAP3K19Q56UN5 1328 aa8.98□□□□□ -0.97
USPL1-203ENST00000614860 KIF20BQ96Q89 1820 aa8.98□□□□□ -0.97
USPL1-203ENST00000614860 SLKQ9H2G2 1235 aaPredicted RBP8.98□□□□□ -0.97
USPL1-203ENST00000614860 ZBTB40Q9NUA8 1239 aa8.97□□□□□ -0.97
USPL1-203ENST00000614860 PPP6R1Q9UPN7 881 aa8.97□□□□□ -0.97
USPL1-203ENST00000614860 UBR1Q8IWV7 1749 aa8.97□□□□□ -0.97
USPL1-203ENST00000614860 TWISTNBQ3B726 338 aaPredicted RBP8.97□□□□□ -0.97
USPL1-203ENST00000614860 RTN4Q9NQC3 1192 aaKnown RBP8.97□□□□□ -0.97
USPL1-203ENST00000614860 EDC4Q6P2E9 1401 aaKnown RBP8.97□□□□□ -0.97
USPL1-203ENST00000614860 NINLQ9Y2I6 1382 aa8.97□□□□□ -0.97
USPL1-203ENST00000614860 IPO8O15397 1037 aaKnown RBP8.97□□□□□ -0.97
USPL1-203ENST00000614860 C16orf71Q8IYS4 520 aaPredicted RBP8.97□□□□□ -0.97
USPL1-203ENST00000614860 MRPL50Q8N5N7 158 aaKnown RBP8.97□□□□□ -0.97
USPL1-203ENST00000614860 F6X3S4 739 aa8.96□□□□□ -0.97
USPL1-203ENST00000614860 MTHFSDQ2M296 383 aaKnown RBP8.96□□□□□ -0.97
USPL1-203ENST00000614860 G2E3Q7L622 706 aa8.96□□□□□ -0.97
USPL1-203ENST00000614860 DDX17Q92841 729 aaKnown RBP8.96□□□□□ -0.97
USPL1-203ENST00000614860 PRDM11Q9NQV5 511 aa8.96□□□□□ -0.97
USPL1-203ENST00000614860 ZBTB7BO15156 539 aaPredicted RBP8.95□□□□□ -0.98
USPL1-203ENST00000614860 DLG5Q8TDM6 1919 aa8.95□□□□□ -0.98
USPL1-203ENST00000614860 FRAT2O75474 233 aaPredicted RBP8.95□□□□□ -0.98
USPL1-203ENST00000614860 MFAP1P55081 439 aaKnown RBP8.95□□□□□ -0.98
USPL1-203ENST00000614860 EYA1Q99502 592 aa8.95□□□□□ -0.98
USPL1-203ENST00000614860 ZNF853P0CG23 659 aa8.95□□□□□ -0.98
USPL1-203ENST00000614860 LMOD3Q0VAK6 560 aa8.95□□□□□ -0.98
USPL1-203ENST00000614860 TPRNQ4KMQ1 711 aa8.95□□□□□ -0.98
USPL1-203ENST00000614860 OTUD7AQ8TE49 926 aaPredicted RBP8.95□□□□□ -0.98
USPL1-203ENST00000614860 TTC5Q8N0Z6 440 aa8.95□□□□□ -0.98
USPL1-203ENST00000614860 ANKRD26Q9UPS8 1709 aa8.95□□□□□ -0.98
USPL1-203ENST00000614860 PEAK1Q9H792 1746 aa8.94□□□□□ -0.98
USPL1-203ENST00000614860 ADAMTS2O95450 1211 aa8.94□□□□□ -0.98
USPL1-203ENST00000614860 REREQ9P2R6 1566 aa8.94□□□□□ -0.98
USPL1-203ENST00000614860 DDX54Q8TDD1 881 aaKnown RBP8.94□□□□□ -0.98
USPL1-203ENST00000614860 RWDD1Q9H446 243 aaPredicted RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms