RNA–Protein interactions for RNA: ENST00000613258.4

NUP153-203, Transcript of nucleoporin 153, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NUP153, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP153-203ENST00000613258 VPS37CA5D8V6 355 aaPredicted RBP17.06■□□□□ 0.32
NUP153-203ENST00000613258 AAMPQ13685 434 aa17.06■□□□□ 0.32
NUP153-203ENST00000613258 DUOX2Q9NRD8 1548 aa17.05■□□□□ 0.32
NUP153-203ENST00000613258 SCAF11Q99590 1463 aaKnown RBP17.05■□□□□ 0.32
NUP153-203ENST00000613258 PBRM1Q86U86 1689 aa17.05■□□□□ 0.32
NUP153-203ENST00000613258 A2MP01023 1474 aa17.05■□□□□ 0.32
NUP153-203ENST00000613258 KRT28Q7Z3Y7 464 aa17.04■□□□□ 0.32
NUP153-203ENST00000613258 C14orf93Q9H972 538 aaKnown RBP17.04■□□□□ 0.32
NUP153-203ENST00000613258 PTCD1O75127 700 aaKnown RBP17.04■□□□□ 0.32
NUP153-203ENST00000613258 CCDC85AQ96PX6 553 aaPredicted RBP17.04■□□□□ 0.32
NUP153-203ENST00000613258 WWC1Q8IX03 1113 aa17.04■□□□□ 0.32
NUP153-203ENST00000613258 TRAPPC8Q9Y2L5 1435 aa17.04■□□□□ 0.32
NUP153-203ENST00000613258 SMC3Q9UQE7 1217 aa17.04■□□□□ 0.32
NUP153-203ENST00000613258 ANO8Q9HCE9 1232 aaPredicted RBP17.04■□□□□ 0.32
NUP153-203ENST00000613258 CWC22Q9HCG8 908 aaKnown RBP17.04■□□□□ 0.32
NUP153-203ENST00000613258 ZNF518AQ6AHZ1 1483 aa17.03■□□□□ 0.32
NUP153-203ENST00000613258 ERC1Q8IUD2 1116 aa17.03■□□□□ 0.32
NUP153-203ENST00000613258 STK11IPQ8N1F8 1099 aa17.03■□□□□ 0.32
NUP153-203ENST00000613258 DISP3Q9P2K9 1392 aa17.03■□□□□ 0.32
NUP153-203ENST00000613258 CCDC158Q5M9N0 1113 aa17.03■□□□□ 0.32
NUP153-203ENST00000613258 TMOD3Q9NYL9 352 aa17.03■□□□□ 0.32
NUP153-203ENST00000613258 ATF7IPQ6VMQ6 1270 aa17.02■□□□□ 0.32
NUP153-203ENST00000613258 PTPRKQ15262 1439 aa17.02■□□□□ 0.32
NUP153-203ENST00000613258 RPRD2Q5VT52 1461 aaKnown RBP17.02■□□□□ 0.32
NUP153-203ENST00000613258 MPRIPQ6WCQ1 1025 aa17.02■□□□□ 0.31
NUP153-203ENST00000613258 SPINK5Q9NQ38 1064 aaPredicted RBP17.02■□□□□ 0.31
NUP153-203ENST00000613258 WDR62O43379 1518 aa17.01■□□□□ 0.31
NUP153-203ENST00000613258 PDE3AQ14432 1141 aa17.01■□□□□ 0.31
NUP153-203ENST00000613258 CCDC57Q2TAC2 916 aa17.01■□□□□ 0.31
NUP153-203ENST00000613258 RRP12Q5JTH9 1297 aaKnown RBP17■□□□□ 0.31
NUP153-203ENST00000613258 LRRCC1Q9C099 1032 aa17■□□□□ 0.31
NUP153-203ENST00000613258 GCC1Q96CN9 775 aa17■□□□□ 0.31
NUP153-203ENST00000613258 MVPQ14764 893 aaKnown RBP17■□□□□ 0.31
NUP153-203ENST00000613258 DUSP27Q5VZP5 1158 aa17■□□□□ 0.31
NUP153-203ENST00000613258 MPHOSPH8Q99549 860 aa17■□□□□ 0.31
NUP153-203ENST00000613258 ACEP12821 1306 aa16.99■□□□□ 0.31
NUP153-203ENST00000613258 BICD2Q8TD16 824 aa16.99■□□□□ 0.31
NUP153-203ENST00000613258 IKQ13123 557 aaPredicted RBP16.99■□□□□ 0.31
NUP153-203ENST00000613258 NGLY1Q96IV0 654 aa16.98■□□□□ 0.31
NUP153-203ENST00000613258 GNL3LQ9NVN8 582 aaKnown RBP16.98■□□□□ 0.31
NUP153-203ENST00000613258 SRGAP3O43295 1099 aa16.98■□□□□ 0.31
NUP153-203ENST00000613258 FBLN1P23142 703 aa16.98■□□□□ 0.31
NUP153-203ENST00000613258 STARD3NLO95772 234 aa16.98■□□□□ 0.31
NUP153-203ENST00000613258 CT47B1P0C2W7 299 aaPredicted RBP16.97■□□□□ 0.31
NUP153-203ENST00000613258 AACSQ86V21 672 aa16.97■□□□□ 0.31
NUP153-203ENST00000613258 SLFN5Q08AF3 891 aa16.97■□□□□ 0.31
NUP153-203ENST00000613258 LRPPRCP42704 1394 aaKnown RBP16.97■□□□□ 0.31
NUP153-203ENST00000613258 CHRNA2Q15822 529 aa16.97■□□□□ 0.31
NUP153-203ENST00000613258 GOLGA6L19H0YKK7 550 aa16.97■□□□□ 0.31
NUP153-203ENST00000613258 NOC3LQ8WTT2 800 aaKnown RBP16.97■□□□□ 0.31
NUP153-203ENST00000613258 PSMA5P28066 241 aa16.96■□□□□ 0.31
NUP153-203ENST00000613258 UHRF1BP1LA0JNW5 1464 aa16.96■□□□□ 0.31
NUP153-203ENST00000613258 RIMS2Q9UQ26 1411 aa16.96■□□□□ 0.31
NUP153-203ENST00000613258 BECN2A8MW95 431 aa16.96■□□□□ 0.31
NUP153-203ENST00000613258 FKBP4Q02790 459 aaKnown RBP eCLIP16.96■□□□□ 0.31
NUP153-203ENST00000613258 SAFBQ15424 915 aaKnown RBP eCLIP16.95■□□□□ 0.3
NUP153-203ENST00000613258 TMEM57Q8N5G2 664 aa16.95■□□□□ 0.3
NUP153-203ENST00000613258 DMRT2Q9Y5R5 561 aa16.95■□□□□ 0.3
NUP153-203ENST00000613258 IL1RAPL2Q9NP60 686 aa16.95■□□□□ 0.3
NUP153-203ENST00000613258 TAF7Q15545 349 aaPredicted RBP16.94■□□□□ 0.3
NUP153-203ENST00000613258 AMOTQ4VCS5 1084 aa16.94■□□□□ 0.3
NUP153-203ENST00000613258 MYD88Q99836 296 aa16.94■□□□□ 0.3
NUP153-203ENST00000613258 RBM5P52756 815 aaKnown RBP eCLIP16.94■□□□□ 0.3
NUP153-203ENST00000613258 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.94■□□□□ 0.31e-6■■□□□ 12.1
NUP153-203ENST00000613258 IFT57Q9NWB7 429 aa16.94■□□□□ 0.3
NUP153-203ENST00000613258 HIP1O00291 1037 aa16.94■□□□□ 0.3
NUP153-203ENST00000613258 ARID3AQ99856 593 aa16.93■□□□□ 0.3
NUP153-203ENST00000613258 SKOR2Q2VWA4 1001 aaPredicted RBP16.93■□□□□ 0.3
NUP153-203ENST00000613258 CHMP5Q9NZZ3 219 aa16.93■□□□□ 0.3
NUP153-203ENST00000613258 MSH6P52701 1360 aa16.93■□□□□ 0.3
NUP153-203ENST00000613258 DCAF8L1A6NGE4 600 aa16.93■□□□□ 0.3
NUP153-203ENST00000613258 CFAP43Q8NDM7 1665 aa16.92■□□□□ 0.3
NUP153-203ENST00000613258 SART3Q15020 963 aaKnown RBP16.92■□□□□ 0.3
NUP153-203ENST00000613258 TPM2P07951 284 aa16.92■□□□□ 0.3
NUP153-203ENST00000613258 ATP2B2Q01814 1243 aa16.92■□□□□ 0.3
NUP153-203ENST00000613258 ANKRD24Q8TF21 1146 aa16.92■□□□□ 0.3
NUP153-203ENST00000613258 CCDC43Q96MW1 224 aaKnown RBP16.92■□□□□ 0.3
NUP153-203ENST00000613258 SLC3A2P08195 630 aaKnown RBP16.91■□□□□ 0.3
NUP153-203ENST00000613258 NCKAP5LQ9HCH0 1330 aa16.91■□□□□ 0.3
NUP153-203ENST00000613258 PCMTD1Q96MG8 357 aaPredicted RBP16.91■□□□□ 0.3
NUP153-203ENST00000613258 ABCC2Q92887 1545 aa16.91■□□□□ 0.3
NUP153-203ENST00000613258 NUTM1Q86Y26 1132 aa16.91■□□□□ 0.3
NUP153-203ENST00000613258 PPIP5K1Q6PFW1 1433 aa16.91■□□□□ 0.3
NUP153-203ENST00000613258 ZPR1O75312 459 aa16.91■□□□□ 0.3
NUP153-203ENST00000613258 NEK4P51957 841 aa16.91■□□□□ 0.3
NUP153-203ENST00000613258 CHD1LQ86WJ1 897 aa16.91■□□□□ 0.3
NUP153-203ENST00000613258 HSPA2P54652 639 aa16.9■□□□□ 0.3
NUP153-203ENST00000613258 CADPS2Q86UW7 1296 aa16.9■□□□□ 0.3
NUP153-203ENST00000613258 BRMS1Q9HCU9 246 aa16.9■□□□□ 0.3
NUP153-203ENST00000613258 ABCC10Q5T3U5 1492 aa16.9■□□□□ 0.3
NUP153-203ENST00000613258 EXOC5O00471 708 aa16.9■□□□□ 0.3
NUP153-203ENST00000613258 IGHMBP2P38935 993 aaKnown RBP16.9■□□□□ 0.3
NUP153-203ENST00000613258 F6X3S4 739 aa16.89■□□□□ 0.29
NUP153-203ENST00000613258 CCDC47Q96A33 483 aaKnown RBP16.89■□□□□ 0.29
NUP153-203ENST00000613258 FAM83GA6ND36 823 aa16.89■□□□□ 0.29
NUP153-203ENST00000613258 TPM3P06753 285 aa16.89■□□□□ 0.29
NUP153-203ENST00000613258 FANCIQ9NVI1 1328 aa16.89■□□□□ 0.29
NUP153-203ENST00000613258 STK3Q13188 491 aa16.89■□□□□ 0.29
NUP153-203ENST00000613258 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.88■□□□□ 0.29
NUP153-203ENST00000613258 CEP126Q9P2H0 1117 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms