RNA–Protein interactions for RNA: ENST00000612930.1

TSKU-205, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 4 BASIC

Gene TSKU, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-205ENST00000612930 CHAMP1Q96JM3 812 aa20.41■□□□□ 0.86
TSKU-205ENST00000612930 NSFL1CQ9UNZ2 370 aaKnown RBP20.41■□□□□ 0.86
TSKU-205ENST00000612930 REREQ9P2R6 1566 aa20.41■□□□□ 0.86
TSKU-205ENST00000612930 SYCE3A1L190 88 aa20.4■□□□□ 0.86
TSKU-205ENST00000612930 BRPF1P55201 1214 aaPredicted RBP20.4■□□□□ 0.86
TSKU-205ENST00000612930 USP26Q9BXU7 913 aa20.4■□□□□ 0.86
TSKU-205ENST00000612930 CWC22Q9HCG8 908 aaKnown RBP20.4■□□□□ 0.86
TSKU-205ENST00000612930 PRDM10Q9NQV6 1147 aa20.4■□□□□ 0.86
TSKU-205ENST00000612930 TMEM132EQ6IEE7 984 aa20.39■□□□□ 0.85
TSKU-205ENST00000612930 ADGRB1O14514 1584 aa20.38■□□□□ 0.85
TSKU-205ENST00000612930 PLEKHM2Q8IWE5 1019 aa20.38■□□□□ 0.85
TSKU-205ENST00000612930 PIK3R4Q99570 1358 aa20.38■□□□□ 0.85
TSKU-205ENST00000612930 KIF3BO15066 747 aa20.38■□□□□ 0.85
TSKU-205ENST00000612930 C14orf93Q9H972 538 aaKnown RBP20.37■□□□□ 0.85
TSKU-205ENST00000612930 CCDC94Q9BW85 323 aaPredicted RBP20.36■□□□□ 0.85
TSKU-205ENST00000612930 MRPL50Q8N5N7 158 aaKnown RBP20.36■□□□□ 0.85
TSKU-205ENST00000612930 MROH1Q8NDA8 1641 aa20.36■□□□□ 0.85
TSKU-205ENST00000612930 PTCH1Q13635 1447 aa20.36■□□□□ 0.85
TSKU-205ENST00000612930 RNF214Q8ND24 703 aa20.35■□□□□ 0.85
TSKU-205ENST00000612930 CHMP4BQ9H444 224 aaKnown RBP20.35■□□□□ 0.85
TSKU-205ENST00000612930 TULP4Q9NRJ4 1543 aa20.35■□□□□ 0.85
TSKU-205ENST00000612930 ZHX1Q9UKY1 873 aaPredicted RBP20.34■□□□□ 0.85
TSKU-205ENST00000612930 TTC22Q5TAA0 569 aa20.34■□□□□ 0.85
TSKU-205ENST00000612930 ARHGAP45Q92619 1136 aa20.34■□□□□ 0.85
TSKU-205ENST00000612930 JARID2Q92833 1246 aaPredicted RBP20.34■□□□□ 0.85
TSKU-205ENST00000612930 GGNBP2Q9H3C7 697 aa20.33■□□□□ 0.85
TSKU-205ENST00000612930 VAMP4O75379 141 aa20.33■□□□□ 0.84
TSKU-205ENST00000612930 ZNF428Q96B54 188 aa20.33■□□□□ 0.84
TSKU-205ENST00000612930 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.33■□□□□ 0.846e-6■□□□□ 11.1
TSKU-205ENST00000612930 ADGRB3O60242 1522 aa20.33■□□□□ 0.84
TSKU-205ENST00000612930 MYRIPQ8NFW9 859 aa20.32■□□□□ 0.84
TSKU-205ENST00000612930 PUS7Q96PZ0 661 aaKnown RBP20.32■□□□□ 0.84
TSKU-205ENST00000612930 DMTNQ08495 405 aa20.32■□□□□ 0.84
TSKU-205ENST00000612930 ABCC4O15439 1325 aa20.32■□□□□ 0.84
TSKU-205ENST00000612930 EFCAB6Q5THR3 1501 aa20.32■□□□□ 0.84
TSKU-205ENST00000612930 C16orf71Q8IYS4 520 aaPredicted RBP20.31■□□□□ 0.84
TSKU-205ENST00000612930 CABP2Q9NPB3 220 aa20.31■□□□□ 0.84
TSKU-205ENST00000612930 EVC2Q86UK5 1308 aa20.31■□□□□ 0.84
TSKU-205ENST00000612930 CHGAP10645 457 aaKnown RBP20.31■□□□□ 0.84
TSKU-205ENST00000612930 ZSCAN20P17040 1043 aaPredicted RBP20.31■□□□□ 0.84
TSKU-205ENST00000612930 KIAA2012Q0VF49 1180 aa20.31■□□□□ 0.84
TSKU-205ENST00000612930 UTP14CQ5TAP6 766 aaKnown RBP20.31■□□□□ 0.84
TSKU-205ENST00000612930 ST18O60284 1047 aa20.3■□□□□ 0.84
TSKU-205ENST00000612930 TSPYL6Q8N831 410 aa20.3■□□□□ 0.84
TSKU-205ENST00000612930 PPLO60437 1756 aa20.3■□□□□ 0.84
TSKU-205ENST00000612930 PLEKHG5O94827 1062 aa20.3■□□□□ 0.84
TSKU-205ENST00000612930 ATP7AQ04656 1500 aa20.3■□□□□ 0.84
TSKU-205ENST00000612930 KNDC1Q76NI1 1749 aa20.3■□□□□ 0.84
TSKU-205ENST00000612930 A0A1W2PP64 1363 aa20.3■□□□□ 0.84
TSKU-205ENST00000612930 FOXD4L5Q5VV16 416 aaPredicted RBP20.3■□□□□ 0.84
TSKU-205ENST00000612930 INTS3Q68E01 1043 aaKnown RBP20.3■□□□□ 0.84
TSKU-205ENST00000612930 ZNF710Q8N1W2 664 aa20.3■□□□□ 0.84
TSKU-205ENST00000612930 FOXD4L4Q8WXT5 416 aaPredicted RBP20.3■□□□□ 0.84
TSKU-205ENST00000612930 CFAP44Q96MT7 982 aa20.3■□□□□ 0.84
TSKU-205ENST00000612930 TSC1Q92574 1164 aa20.29■□□□□ 0.84
TSKU-205ENST00000612930 ZBTB7CA1YPR0 619 aa20.29■□□□□ 0.84
TSKU-205ENST00000612930 PTMAP06454 111 aaKnown RBP20.29■□□□□ 0.84
TSKU-205ENST00000612930 MBD3O95983 291 aa20.28■□□□□ 0.84
TSKU-205ENST00000612930 DCTPP1Q9H773 170 aa20.28■□□□□ 0.84
TSKU-205ENST00000612930 FANCAO15360 1455 aa20.28■□□□□ 0.84
TSKU-205ENST00000612930 DIAPH1O60610 1272 aaKnown RBP20.28■□□□□ 0.84
TSKU-205ENST00000612930 OTUD7AQ8TE49 926 aaPredicted RBP20.28■□□□□ 0.84
TSKU-205ENST00000612930 ATAD2Q6PL18 1390 aa20.27■□□□□ 0.84
TSKU-205ENST00000612930 TSPY26PQ9H489 355 aa20.27■□□□□ 0.83
TSKU-205ENST00000612930 SDSP20132 328 aa20.26■□□□□ 0.83
TSKU-205ENST00000612930 ERCC6L2Q5T890 1561 aa20.26■□□□□ 0.83
TSKU-205ENST00000612930 THUMPD2Q9BTF0 503 aaKnown RBP20.26■□□□□ 0.83
TSKU-205ENST00000612930 ZCCHC11Q5TAX3 1644 aaKnown RBP20.25■□□□□ 0.83
TSKU-205ENST00000612930 ARHGEF28Q8N1W1 1705 aaKnown RBP20.25■□□□□ 0.83
TSKU-205ENST00000612930 ELL2O00472 640 aaPredicted RBP20.25■□□□□ 0.83
TSKU-205ENST00000612930 GLI2P10070 1586 aa20.25■□□□□ 0.83
TSKU-205ENST00000612930 LRRC7Q96NW7 1537 aa20.25■□□□□ 0.83
TSKU-205ENST00000612930 FYB1O15117 783 aa20.25■□□□□ 0.83
TSKU-205ENST00000612930 DNTTIP2Q5QJE6 756 aaKnown RBP20.25■□□□□ 0.83
TSKU-205ENST00000612930 MPNDQ8N594 471 aa20.24■□□□□ 0.83
TSKU-205ENST00000612930 PRIMPOLQ96LW4 560 aa20.24■□□□□ 0.83
TSKU-205ENST00000612930 ZNF830Q96NB3 372 aaPredicted RBP20.24■□□□□ 0.83
TSKU-205ENST00000612930 PNPLA6Q8IY17 1366 aa20.24■□□□□ 0.83
TSKU-205ENST00000612930 A0A0U1RQG5 324 aaPredicted RBP20.23■□□□□ 0.83
TSKU-205ENST00000612930 GTF2F1P35269 517 aaKnown RBP eCLIP20.23■□□□□ 0.83
TSKU-205ENST00000612930 ANKRD26Q9UPS8 1709 aa20.23■□□□□ 0.83
TSKU-205ENST00000612930 FCHSD2O94868 740 aa20.23■□□□□ 0.83
TSKU-205ENST00000612930 PIBF1Q8WXW3 757 aa20.23■□□□□ 0.83
TSKU-205ENST00000612930 BRD1O95696 1058 aa20.22■□□□□ 0.83
TSKU-205ENST00000612930 PRKAR2BP31323 418 aa20.22■□□□□ 0.83
TSKU-205ENST00000612930 FAM135BQ49AJ0 1406 aa20.21■□□□□ 0.83
TSKU-205ENST00000612930 HMGN5P82970 282 aaKnown RBP20.21■□□□□ 0.83
TSKU-205ENST00000612930 NOLC1Q14978 699 aaKnown RBP eCLIP20.21■□□□□ 0.83
TSKU-205ENST00000612930 CBX1P83916 185 aa20.21■□□□□ 0.83
TSKU-205ENST00000612930 TMX3Q96JJ7 454 aa20.21■□□□□ 0.83
TSKU-205ENST00000612930 YEATS2Q9ULM3 1422 aa20.2■□□□□ 0.82
TSKU-205ENST00000612930 SAFB2Q14151 953 aaKnown RBP eCLIP20.2■□□□□ 0.82
TSKU-205ENST00000612930 ARAP3Q8WWN8 1544 aa20.2■□□□□ 0.82
TSKU-205ENST00000612930 ATP2B3Q16720 1220 aa20.2■□□□□ 0.82
TSKU-205ENST00000612930 CASC1Q6TDU7 716 aa20.2■□□□□ 0.82
TSKU-205ENST00000612930 C17orf53Q8N3J3 647 aaPredicted RBP20.2■□□□□ 0.82
TSKU-205ENST00000612930 PHACTR3Q96KR7 559 aa20.2■□□□□ 0.82
TSKU-205ENST00000612930 MBIPQ9NS73 344 aa20.2■□□□□ 0.82
TSKU-205ENST00000612930 CFAP65Q6ZU64 1925 aaKnown RBP20.19■□□□□ 0.82
TSKU-205ENST00000612930 FAM177BA6PVY3 158 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms