RNA–Protein interactions for RNA: ENST00000612728.4

ZNHIT3-202, Transcript of zinc finger HIT-type containing 3, humanhuman

TSL 1 (best)

Gene ZNHIT3, Length 1,981 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNHIT3-202ENST00000612728 TRPM3Q9HCF6 1732 aaPredicted RBP17.28■□□□□ 0.36
ZNHIT3-202ENST00000612728 EIF4A2Q14240 407 aaKnown RBP17.28■□□□□ 0.36
ZNHIT3-202ENST00000612728 SOX12O15370 315 aa17.28■□□□□ 0.36
ZNHIT3-202ENST00000612728 PPP4R2Q9NY27 417 aa17.28■□□□□ 0.36
ZNHIT3-202ENST00000612728 MSH6P52701 1360 aa17.27■□□□□ 0.36
ZNHIT3-202ENST00000612728 HMOX1P09601 288 aa17.27■□□□□ 0.36
ZNHIT3-202ENST00000612728 CADPS2Q86UW7 1296 aa17.27■□□□□ 0.36
ZNHIT3-202ENST00000612728 HSP90AB2PQ58FF8 381 aa17.26■□□□□ 0.35
ZNHIT3-202ENST00000612728 PELP1Q8IZL8 1130 aaKnown RBP17.26■□□□□ 0.35
ZNHIT3-202ENST00000612728 FOXO3O43524 673 aa17.26■□□□□ 0.35
ZNHIT3-202ENST00000612728 TRIM35Q9UPQ4 493 aa17.26■□□□□ 0.35
ZNHIT3-202ENST00000612728 RTL1A6NKG5 1358 aa17.25■□□□□ 0.35
ZNHIT3-202ENST00000612728 LTN1O94822 1766 aa17.25■□□□□ 0.35
ZNHIT3-202ENST00000612728 NFAT5O94916 1531 aa17.25■□□□□ 0.35
ZNHIT3-202ENST00000612728 AMPHP49418 695 aa17.25■□□□□ 0.35
ZNHIT3-202ENST00000612728 RIPK4P57078 832 aa17.25■□□□□ 0.35
ZNHIT3-202ENST00000612728 NUTM2GQ5VZR2 741 aa17.25■□□□□ 0.35
ZNHIT3-202ENST00000612728 MYH16Q9H6N6 1097 aa17.25■□□□□ 0.35
ZNHIT3-202ENST00000612728 IL16Q14005 1332 aa17.24■□□□□ 0.35
ZNHIT3-202ENST00000612728 ARHGEF10O15013 1369 aa17.24■□□□□ 0.35
ZNHIT3-202ENST00000612728 PHRF1Q9P1Y6 1649 aaKnown RBP17.24■□□□□ 0.35
ZNHIT3-202ENST00000612728 NFE2L2Q16236 605 aa17.24■□□□□ 0.35
ZNHIT3-202ENST00000612728 KCNH5Q8NCM2 988 aa17.23■□□□□ 0.35
ZNHIT3-202ENST00000612728 SLIT3O75094 1523 aa17.23■□□□□ 0.35
ZNHIT3-202ENST00000612728 PHACTR3Q96KR7 559 aa17.22■□□□□ 0.35
ZNHIT3-202ENST00000612728 ALS2Q96Q42 1657 aa17.22■□□□□ 0.35
ZNHIT3-202ENST00000612728 KRT28Q7Z3Y7 464 aa17.22■□□□□ 0.35
ZNHIT3-202ENST00000612728 DLG5Q8TDM6 1919 aa17.21■□□□□ 0.35
ZNHIT3-202ENST00000612728 HOXC9P31274 260 aa17.21■□□□□ 0.35
ZNHIT3-202ENST00000612728 SULT6B1Q6IMI4 303 aa17.21■□□□□ 0.35
ZNHIT3-202ENST00000612728 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.2■□□□□ 0.34
ZNHIT3-202ENST00000612728 KDRP35968 1356 aa17.2■□□□□ 0.34
ZNHIT3-202ENST00000612728 ZNF335Q9H4Z2 1342 aaPredicted RBP17.2■□□□□ 0.34
ZNHIT3-202ENST00000612728 XPCQ01831 940 aaPredicted RBP17.19■□□□□ 0.34
ZNHIT3-202ENST00000612728 LMOD3Q0VAK6 560 aa17.19■□□□□ 0.34
ZNHIT3-202ENST00000612728 USP19O94966 1318 aa17.19■□□□□ 0.34
ZNHIT3-202ENST00000612728 IGSF1Q8N6C5 1336 aa17.19■□□□□ 0.34
ZNHIT3-202ENST00000612728 CALD1Q05682 793 aaKnown RBP17.19■□□□□ 0.34
ZNHIT3-202ENST00000612728 AEBP1Q8IUX7 1158 aa17.19■□□□□ 0.34
ZNHIT3-202ENST00000612728 NPHP3Q7Z494 1330 aa17.18■□□□□ 0.34
ZNHIT3-202ENST00000612728 FANCIQ9NVI1 1328 aa17.18■□□□□ 0.34
ZNHIT3-202ENST00000612728 CT47B1P0C2W7 299 aaPredicted RBP17.17■□□□□ 0.34
ZNHIT3-202ENST00000612728 PLIN1O60240 522 aa17.16■□□□□ 0.34
ZNHIT3-202ENST00000612728 PPP4R3CPQ6ZMV5 832 aa17.16■□□□□ 0.34
ZNHIT3-202ENST00000612728 IP6K1Q92551 441 aa17.16■□□□□ 0.34
ZNHIT3-202ENST00000612728 EYA1Q99502 592 aa17.15■□□□□ 0.34
ZNHIT3-202ENST00000612728 GCP02774 474 aa17.15■□□□□ 0.34
ZNHIT3-202ENST00000612728 PXDNQ92626 1479 aa17.14■□□□□ 0.33
ZNHIT3-202ENST00000612728 LMOD2Q6P5Q4 547 aa17.14■□□□□ 0.33
ZNHIT3-202ENST00000612728 TSR2Q969E8 191 aaKnown RBP17.13■□□□□ 0.33
ZNHIT3-202ENST00000612728 TNS3Q68CZ2 1445 aa17.13■□□□□ 0.33
ZNHIT3-202ENST00000612728 B4GALNT3Q6L9W6 998 aa17.13■□□□□ 0.33
ZNHIT3-202ENST00000612728 EXOC6Q8TAG9 804 aa17.13■□□□□ 0.33
ZNHIT3-202ENST00000612728 MED1Q15648 1581 aaPredicted RBP17.13■□□□□ 0.33
ZNHIT3-202ENST00000612728 BCAR3O75815 825 aa17.12■□□□□ 0.33
ZNHIT3-202ENST00000612728 RARSP54136 660 aaKnown RBP17.12■□□□□ 0.33
ZNHIT3-202ENST00000612728 ARHGEF25Q86VW2 580 aa17.12■□□□□ 0.33
ZNHIT3-202ENST00000612728 CCDC136Q96JN2 1154 aa17.11■□□□□ 0.33
ZNHIT3-202ENST00000612728 IFT57Q9NWB7 429 aa17.11■□□□□ 0.33
ZNHIT3-202ENST00000612728 GNAI1P63096 354 aa17.11■□□□□ 0.33
ZNHIT3-202ENST00000612728 BRINP3Q76B58 766 aa17.11■□□□□ 0.33
ZNHIT3-202ENST00000612728 EXOSC9Q06265 439 aaKnown RBP17.1■□□□□ 0.33
ZNHIT3-202ENST00000612728 CRBNQ96SW2 442 aa17.09■□□□□ 0.33
ZNHIT3-202ENST00000612728 ZNF853P0CG23 659 aa17.09■□□□□ 0.33
ZNHIT3-202ENST00000612728 C20orf194Q5TEA3 1177 aa17.09■□□□□ 0.33
ZNHIT3-202ENST00000612728 DDX17Q92841 729 aaKnown RBP17.09■□□□□ 0.33
ZNHIT3-202ENST00000612728 LTV1Q96GA3 475 aaPredicted RBP17.09■□□□□ 0.33
ZNHIT3-202ENST00000612728 SLAIN2Q9P270 581 aa17.09■□□□□ 0.33
ZNHIT3-202ENST00000612728 CRYBG1Q9Y4K1 1723 aa17.09■□□□□ 0.33
ZNHIT3-202ENST00000612728 GAS2L2Q8NHY3 880 aa17.08■□□□□ 0.33
ZNHIT3-202ENST00000612728 CFAP44Q96MT7 982 aa17.08■□□□□ 0.33
ZNHIT3-202ENST00000612728 THUMPD2Q9BTF0 503 aaKnown RBP17.08■□□□□ 0.33
ZNHIT3-202ENST00000612728 SPATA31A3Q5VYP0 1347 aa17.08■□□□□ 0.32
ZNHIT3-202ENST00000612728 PDE3AQ14432 1141 aa17.08■□□□□ 0.32
ZNHIT3-202ENST00000612728 FAM83GA6ND36 823 aa17.07■□□□□ 0.32
ZNHIT3-202ENST00000612728 ABCC6O95255 1503 aa17.07■□□□□ 0.32
ZNHIT3-202ENST00000612728 CAMTA1Q9Y6Y1 1673 aa17.07■□□□□ 0.32
ZNHIT3-202ENST00000612728 ZBTB7CA1YPR0 619 aa17.06■□□□□ 0.32
ZNHIT3-202ENST00000612728 CANXP27824 592 aaKnown RBP17.06■□□□□ 0.32
ZNHIT3-202ENST00000612728 MTHFSDQ2M296 383 aaKnown RBP17.06■□□□□ 0.32
ZNHIT3-202ENST00000612728 NCAPD2Q15021 1401 aa17.06■□□□□ 0.32
ZNHIT3-202ENST00000612728 ZNF428Q96B54 188 aa17.06■□□□□ 0.32
ZNHIT3-202ENST00000612728 LAS1LQ9Y4W2 734 aaKnown RBP17.06■□□□□ 0.32
ZNHIT3-202ENST00000612728 RGPD2P0DJD1 1756 aa17.06■□□□□ 0.32
ZNHIT3-202ENST00000612728 MBIPQ9NS73 344 aa17.04■□□□□ 0.32
ZNHIT3-202ENST00000612728 SOS2Q07890 1332 aaPredicted RBP17.04■□□□□ 0.32
ZNHIT3-202ENST00000612728 NHSL1Q5SYE7 1610 aa17.04■□□□□ 0.32
ZNHIT3-202ENST00000612728 HTATSF1O43719 755 aaKnown RBP17.04■□□□□ 0.32
ZNHIT3-202ENST00000612728 DCTN1Q14203 1278 aa17.04■□□□□ 0.32
ZNHIT3-202ENST00000612728 NBPF6Q5VWK0 638 aa17.04■□□□□ 0.32
ZNHIT3-202ENST00000612728 RTF1Q92541 710 aaKnown RBP17.04■□□□□ 0.32
ZNHIT3-202ENST00000612728 NBPF4Q96M43 638 aa17.04■□□□□ 0.32
ZNHIT3-202ENST00000612728 LRRC37A3O60309 1634 aa17.03■□□□□ 0.32
ZNHIT3-202ENST00000612728 RGPD5Q99666 1765 aa17.03■□□□□ 0.32
ZNHIT3-202ENST00000612728 PLEKHG5O94827 1062 aa17.03■□□□□ 0.32
ZNHIT3-202ENST00000612728 ALDH1L2Q3SY69 923 aa17.02■□□□□ 0.32
ZNHIT3-202ENST00000612728 FRAT1Q92837 279 aaPredicted RBP17.02■□□□□ 0.32
ZNHIT3-202ENST00000612728 COL18A1P39060 1754 aa17.02■□□□□ 0.32
ZNHIT3-202ENST00000612728 MCM10Q7L590 875 aa17.02■□□□□ 0.31
ZNHIT3-202ENST00000612728 ANKRD24Q8TF21 1146 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms