RNA–Protein interactions for RNA: ENST00000612438.1

LINC00547-201, long intergenic non-protein coding RNA 547, humanhuman

TSL 2 BASIC

Gene LINC00547, Length 3,314 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00547-201ENST00000612438 ADGRB2O60241 1585 aa10.82□□□□□ -0.68
LINC00547-201ENST00000612438 ZNF500O60304 480 aaPredicted RBP10.82□□□□□ -0.68
LINC00547-201ENST00000612438 ATF7IPQ6VMQ6 1270 aa10.82□□□□□ -0.68
LINC00547-201ENST00000612438 ZNF771Q7L3S4 317 aaPredicted RBP10.82□□□□□ -0.68
LINC00547-201ENST00000612438 ADGRB1O14514 1584 aa10.82□□□□□ -0.68
LINC00547-201ENST00000612438 ZC3H13Q5T200 1668 aaKnown RBP10.81□□□□□ -0.68
LINC00547-201ENST00000612438 ADGRB3O60242 1522 aa10.81□□□□□ -0.68
LINC00547-201ENST00000612438 PTMAP06454 111 aaKnown RBP10.81□□□□□ -0.68
LINC00547-201ENST00000612438 DDIT3P35638 169 aa10.81□□□□□ -0.68
LINC00547-201ENST00000612438 TMEM132EQ6IEE7 984 aa10.81□□□□□ -0.68
LINC00547-201ENST00000612438 QRICH2Q9H0J4 1663 aa10.81□□□□□ -0.68
LINC00547-201ENST00000612438 ASXL2Q76L83 1435 aa10.81□□□□□ -0.68
LINC00547-201ENST00000612438 DDX11L8A8MPP1 907 aa10.81□□□□□ -0.68
LINC00547-201ENST00000612438 HS1BP3Q53T59 392 aa10.81□□□□□ -0.68
LINC00547-201ENST00000612438 ITPRIPQ8IWB1 547 aa10.81□□□□□ -0.68
LINC00547-201ENST00000612438 PLEKHF1Q96S99 279 aa10.81□□□□□ -0.68
LINC00547-201ENST00000612438 RBM25P49756 843 aaKnown RBP10.81□□□□□ -0.68
LINC00547-201ENST00000612438 NUTM2DQ5VT03 806 aaPredicted RBP10.81□□□□□ -0.68
LINC00547-201ENST00000612438 TRIM35Q9UPQ4 493 aa10.81□□□□□ -0.68
LINC00547-201ENST00000612438 ANKRD36BQ8N2N9 1353 aa10.81□□□□□ -0.68
LINC00547-201ENST00000612438 LMTK2Q8IWU2 1503 aa10.8□□□□□ -0.68
LINC00547-201ENST00000612438 TMPOP42166 694 aaKnown RBP10.8□□□□□ -0.68
LINC00547-201ENST00000612438 PSEN1P49768 467 aa10.8□□□□□ -0.68
LINC00547-201ENST00000612438 SNX21Q969T3 373 aa10.8□□□□□ -0.68
LINC00547-201ENST00000612438 ZBTB40Q9NUA8 1239 aa10.8□□□□□ -0.68
LINC00547-201ENST00000612438 SLC52A1Q9NWF4 448 aa10.8□□□□□ -0.68
LINC00547-201ENST00000612438 NOB1Q9ULX3 412 aaKnown RBP10.8□□□□□ -0.68
LINC00547-201ENST00000612438 NCOA3Q9Y6Q9 1424 aa10.8□□□□□ -0.68
LINC00547-201ENST00000612438 PPRC1Q5VV67 1664 aaKnown RBP10.8□□□□□ -0.68
LINC00547-201ENST00000612438 PATL2C9JE40 543 aaKnown RBP10.79□□□□□ -0.68
LINC00547-201ENST00000612438 EVC2Q86UK5 1308 aa10.79□□□□□ -0.68
LINC00547-201ENST00000612438 ABCA9Q8IUA7 1624 aa10.79□□□□□ -0.68
LINC00547-201ENST00000612438 TMEM57Q8N5G2 664 aa10.79□□□□□ -0.68
LINC00547-201ENST00000612438 YY1AP1Q9H869 796 aa10.79□□□□□ -0.68
LINC00547-201ENST00000612438 CD109Q6YHK3 1445 aa10.79□□□□□ -0.68
LINC00547-201ENST00000612438 IL16Q14005 1332 aa10.79□□□□□ -0.68
LINC00547-201ENST00000612438 CCDC66A2RUB6 948 aa10.79□□□□□ -0.68
LINC00547-201ENST00000612438 MYCNP04198 464 aaPredicted RBP10.79□□□□□ -0.68
LINC00547-201ENST00000612438 NUCB1Q02818 461 aa10.79□□□□□ -0.68
LINC00547-201ENST00000612438 RPGRIP1LQ68CZ1 1315 aa10.79□□□□□ -0.68
LINC00547-201ENST00000612438 GEMIN8Q9NWZ8 242 aaKnown RBP10.78□□□□□ -0.68
LINC00547-201ENST00000612438 XPCQ01831 940 aaPredicted RBP10.78□□□□□ -0.68
LINC00547-201ENST00000612438 CIZ1Q9ULV3 898 aaPredicted RBP10.78□□□□□ -0.68
LINC00547-201ENST00000612438 NOL7Q9UMY1 257 aaKnown RBP10.78□□□□□ -0.68
LINC00547-201ENST00000612438 IPO8O15397 1037 aaKnown RBP10.77□□□□□ -0.69
LINC00547-201ENST00000612438 MLECQ14165 292 aa10.77□□□□□ -0.69
LINC00547-201ENST00000612438 TSPYL1Q9H0U9 437 aa10.77□□□□□ -0.69
LINC00547-201ENST00000612438 ABCC11Q96J66 1382 aa10.77□□□□□ -0.69
LINC00547-201ENST00000612438 U2SURPO15042 1029 aaKnown RBP10.77□□□□□ -0.69
LINC00547-201ENST00000612438 NASPP49321 788 aaPredicted RBP10.77□□□□□ -0.69
LINC00547-201ENST00000612438 PPLO60437 1756 aa10.76□□□□□ -0.69
LINC00547-201ENST00000612438 FAM69CQ0P6D2 419 aa10.76□□□□□ -0.69
LINC00547-201ENST00000612438 TNPO1Q92973 898 aaKnown RBP10.76□□□□□ -0.69
LINC00547-201ENST00000612438 SOX12O15370 315 aa10.76□□□□□ -0.69
LINC00547-201ENST00000612438 ATP2B3Q16720 1220 aa10.76□□□□□ -0.69
LINC00547-201ENST00000612438 TIGD1Q96MW7 591 aa10.76□□□□□ -0.69
LINC00547-201ENST00000612438 CHD1LQ86WJ1 897 aa10.76□□□□□ -0.69
LINC00547-201ENST00000612438 KIF16BQ96L93 1317 aa10.76□□□□□ -0.69
LINC00547-201ENST00000612438 CABP2Q9NPB3 220 aa10.76□□□□□ -0.69
LINC00547-201ENST00000612438 TULP4Q9NRJ4 1543 aa10.76□□□□□ -0.69
LINC00547-201ENST00000612438 NPATQ14207 1427 aa10.75□□□□□ -0.69
LINC00547-201ENST00000612438 LNPKQ9C0E8 428 aa10.75□□□□□ -0.69
LINC00547-201ENST00000612438 RAB3GAP1Q15042 981 aa10.75□□□□□ -0.69
LINC00547-201ENST00000612438 ALDH1L2Q3SY69 923 aa10.75□□□□□ -0.69
LINC00547-201ENST00000612438 GAS2L3Q86XJ1 694 aa10.75□□□□□ -0.69
LINC00547-201ENST00000612438 COL3A1P02461 1466 aaPredicted RBP10.75□□□□□ -0.69
LINC00547-201ENST00000612438 MCM5P33992 734 aa10.74□□□□□ -0.69
LINC00547-201ENST00000612438 BMP2KLQ5H9B9 411 aa10.74□□□□□ -0.69
LINC00547-201ENST00000612438 GBP4Q96PP9 640 aa10.74□□□□□ -0.69
LINC00547-201ENST00000612438 HSP90AB1P08238 724 aaKnown RBP10.74□□□□□ -0.69
LINC00547-201ENST00000612438 KIF2CQ99661 725 aa10.74□□□□□ -0.69
LINC00547-201ENST00000612438 KIF3AQ9Y496 699 aa10.74□□□□□ -0.69
LINC00547-201ENST00000612438 TRIM6-TRIM34B2RNG4 842 aa10.74□□□□□ -0.69
LINC00547-201ENST00000612438 SKOR2Q2VWA4 1001 aaPredicted RBP10.74□□□□□ -0.69
LINC00547-201ENST00000612438 MYRIPQ8NFW9 859 aa10.74□□□□□ -0.69
LINC00547-201ENST00000612438 TRIM34Q9BYJ4 488 aa10.74□□□□□ -0.69
LINC00547-201ENST00000612438 KIDINS220Q9ULH0 1771 aa10.74□□□□□ -0.69
LINC00547-201ENST00000612438 GGNBP2Q9H3C7 697 aa10.73□□□□□ -0.69
LINC00547-201ENST00000612438 IGSF3O75054 1194 aa10.73□□□□□ -0.69
LINC00547-201ENST00000612438 GLI2P10070 1586 aa10.73□□□□□ -0.69
LINC00547-201ENST00000612438 A0A1W2PP64 1363 aa10.73□□□□□ -0.69
LINC00547-201ENST00000612438 BRPF1P55201 1214 aaPredicted RBP10.73□□□□□ -0.69
LINC00547-201ENST00000612438 GRIPAP1Q4V328 841 aa10.72□□□□□ -0.69
LINC00547-201ENST00000612438 SPDYE4A6NLX3 237 aa10.71□□□□□ -0.69
LINC00547-201ENST00000612438 FYB1O15117 783 aa10.71□□□□□ -0.69
LINC00547-201ENST00000612438 ZBTB7BO15156 539 aaPredicted RBP10.71□□□□□ -0.69
LINC00547-201ENST00000612438 GCC1Q96CN9 775 aa10.71□□□□□ -0.69
LINC00547-201ENST00000612438 DIAPH1O60610 1272 aaKnown RBP10.71□□□□□ -0.69
LINC00547-201ENST00000612438 HMGN5P82970 282 aaKnown RBP10.71□□□□□ -0.69
LINC00547-201ENST00000612438 ZNF428Q96B54 188 aa10.71□□□□□ -0.69
LINC00547-201ENST00000612438 ZKSCAN5Q9Y2L8 839 aa10.71□□□□□ -0.69
LINC00547-201ENST00000612438 ANKRD45Q5TZF3 282 aa10.71□□□□□ -0.7
LINC00547-201ENST00000612438 CHMP4CQ96CF2 233 aa10.71□□□□□ -0.7
LINC00547-201ENST00000612438 EFCC1Q9HA90 598 aa10.71□□□□□ -0.7
LINC00547-201ENST00000612438 ARHGEF28Q8N1W1 1705 aaKnown RBP10.71□□□□□ -0.7
LINC00547-201ENST00000612438 CD2BP2O95400 341 aaKnown RBP10.7□□□□□ -0.7
LINC00547-201ENST00000612438 GABPB1Q06547 395 aaPredicted RBP10.7□□□□□ -0.7
LINC00547-201ENST00000612438 ZNF710Q8N1W2 664 aa10.7□□□□□ -0.7
LINC00547-201ENST00000612438 PRIMPOLQ96LW4 560 aa10.7□□□□□ -0.7
LINC00547-201ENST00000612438 PNPLA6Q8IY17 1366 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms