RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 ORAI2Q96SN7 254 aa20.39■□□□□ 0.85
RTN1-209ENST00000611068 PIK3R4Q99570 1358 aa20.38■□□□□ 0.85
RTN1-209ENST00000611068 ITSN1Q15811 1721 aa20.38■□□□□ 0.85
RTN1-209ENST00000611068 MAP2P11137 1827 aaKnown RBP20.38■□□□□ 0.85
RTN1-209ENST00000611068 NLRP6P59044 892 aa20.38■□□□□ 0.85
RTN1-209ENST00000611068 RRP1P56182 461 aaKnown RBP20.37■□□□□ 0.85
RTN1-209ENST00000611068 PRKAR2BP31323 418 aa20.36■□□□□ 0.85
RTN1-209ENST00000611068 PHF8Q9UPP1 1060 aa20.36■□□□□ 0.85
RTN1-209ENST00000611068 CHD2O14647 1828 aaKnown RBP20.36■□□□□ 0.85
RTN1-209ENST00000611068 ANKRD26Q9UPS8 1709 aa20.36■□□□□ 0.85
RTN1-209ENST00000611068 HSP90AB2PQ58FF8 381 aa20.36■□□□□ 0.85
RTN1-209ENST00000611068 ABTB2Q8N961 1025 aa20.36■□□□□ 0.85
RTN1-209ENST00000611068 PLEKHF1Q96S99 279 aa20.36■□□□□ 0.85
RTN1-209ENST00000611068 MAPK8IP3Q9UPT6 1336 aa20.35■□□□□ 0.85
RTN1-209ENST00000611068 COL3A1P02461 1466 aaPredicted RBP20.35■□□□□ 0.85
RTN1-209ENST00000611068 ZBTB7CA1YPR0 619 aa20.35■□□□□ 0.85
RTN1-209ENST00000611068 FOXO3O43524 673 aa20.35■□□□□ 0.85
RTN1-209ENST00000611068 LMOD2Q6P5Q4 547 aa20.35■□□□□ 0.85
RTN1-209ENST00000611068 PHACTR3Q96KR7 559 aa20.35■□□□□ 0.85
RTN1-209ENST00000611068 MON2Q7Z3U7 1717 aa20.34■□□□□ 0.85
RTN1-209ENST00000611068 AKAP12Q02952 1782 aa20.34■□□□□ 0.85
RTN1-209ENST00000611068 IL13P35225 146 aa20.33■□□□□ 0.84
RTN1-209ENST00000611068 PSME1Q06323 249 aa20.33■□□□□ 0.84
RTN1-209ENST00000611068 PNPLA6Q8IY17 1366 aa20.33■□□□□ 0.84
RTN1-209ENST00000611068 C20orf194Q5TEA3 1177 aa20.32■□□□□ 0.84
RTN1-209ENST00000611068 TOPAZ1Q8N9V7 1692 aa20.32■□□□□ 0.84
RTN1-209ENST00000611068 NALCNQ8IZF0 1738 aa20.32■□□□□ 0.84
RTN1-209ENST00000611068 TMPOP42166 694 aaKnown RBP20.32■□□□□ 0.84
RTN1-209ENST00000611068 RIPK4P57078 832 aa20.32■□□□□ 0.84
RTN1-209ENST00000611068 DDX17Q92841 729 aaKnown RBP20.32■□□□□ 0.84
RTN1-209ENST00000611068 CALD1Q05682 793 aaKnown RBP20.31■□□□□ 0.84
RTN1-209ENST00000611068 AEBP1Q8IUX7 1158 aa20.31■□□□□ 0.84
RTN1-209ENST00000611068 BCAR3O75815 825 aa20.31■□□□□ 0.84
RTN1-209ENST00000611068 TSR2Q969E8 191 aaKnown RBP20.31■□□□□ 0.84
RTN1-209ENST00000611068 E9PSI1 815 aa20.3■□□□□ 0.84
RTN1-209ENST00000611068 THUMPD2Q9BTF0 503 aaKnown RBP20.3■□□□□ 0.84
RTN1-209ENST00000611068 L1TD1Q5T7N2 865 aaKnown RBP20.29■□□□□ 0.84
RTN1-209ENST00000611068 LTV1Q96GA3 475 aaPredicted RBP20.29■□□□□ 0.84
RTN1-209ENST00000611068 EIF4A2Q14240 407 aaKnown RBP20.29■□□□□ 0.84
RTN1-209ENST00000611068 MAP3K19Q56UN5 1328 aa20.28■□□□□ 0.84
RTN1-209ENST00000611068 PANK2Q9BZ23 570 aa20.28■□□□□ 0.84
RTN1-209ENST00000611068 BCL11BQ9C0K0 894 aaPredicted RBP20.28■□□□□ 0.84
RTN1-209ENST00000611068 XRCC6P12956 609 aaKnown RBP eCLIP20.28■□□□□ 0.84
RTN1-209ENST00000611068 BCL2L13Q9BXK5 485 aa20.28■□□□□ 0.84
RTN1-209ENST00000611068 TRIM35Q9UPQ4 493 aa20.28■□□□□ 0.84
RTN1-209ENST00000611068 SSH2Q76I76 1423 aa20.28■□□□□ 0.84
RTN1-209ENST00000611068 AMPHP49418 695 aa20.27■□□□□ 0.84
RTN1-209ENST00000611068 TRMT2AQ8IZ69 625 aaKnown RBP20.27■□□□□ 0.84
RTN1-209ENST00000611068 ADGRL3Q9HAR2 1447 aa20.27■□□□□ 0.84
RTN1-209ENST00000611068 SULT6B1Q6IMI4 303 aa20.27■□□□□ 0.84
RTN1-209ENST00000611068 IQSEC2Q5JU85 1478 aa20.27■□□□□ 0.83
RTN1-209ENST00000611068 OVOS2A0A0J9YW53 1432 aa20.26■□□□□ 0.83
RTN1-209ENST00000611068 OVOS2Q6IE36 1432 aa20.26■□□□□ 0.83
RTN1-209ENST00000611068 FCHSD2O94868 740 aa20.26■□□□□ 0.83
RTN1-209ENST00000611068 PDCL3Q9H2J4 239 aa20.26■□□□□ 0.83
RTN1-209ENST00000611068 AATKQ6ZMQ8 1374 aa20.26■□□□□ 0.83
RTN1-209ENST00000611068 TTC21AQ8NDW8 1320 aa20.25■□□□□ 0.83
RTN1-209ENST00000611068 NRKQ7Z2Y5 1582 aa20.25■□□□□ 0.83
RTN1-209ENST00000611068 FMN2Q9NZ56 1722 aa20.25■□□□□ 0.83
RTN1-209ENST00000611068 TMEM94Q12767 1356 aa20.24■□□□□ 0.83
RTN1-209ENST00000611068 ANKARQ7Z5J8 1434 aa20.24■□□□□ 0.83
RTN1-209ENST00000611068 DCTN1Q14203 1278 aa20.23■□□□□ 0.83
RTN1-209ENST00000611068 CRBNQ96SW2 442 aa20.23■□□□□ 0.83
RTN1-209ENST00000611068 FAM83GA6ND36 823 aa20.23■□□□□ 0.83
RTN1-209ENST00000611068 PHF23Q9BUL5 403 aaPredicted RBP20.23■□□□□ 0.83
RTN1-209ENST00000611068 C19orf44Q9H6X5 657 aa20.23■□□□□ 0.83
RTN1-209ENST00000611068 ATF3P18847 181 aa20.22■□□□□ 0.83
RTN1-209ENST00000611068 LRRC7Q96NW7 1537 aa20.22■□□□□ 0.83
RTN1-209ENST00000611068 WDR63Q8IWG1 891 aa20.21■□□□□ 0.83
RTN1-209ENST00000611068 CDK12Q9NYV4 1490 aaPredicted RBP20.2■□□□□ 0.82
RTN1-209ENST00000611068 PIK3C2AO00443 1686 aa20.19■□□□□ 0.82
RTN1-209ENST00000611068 USP31Q70CQ4 1352 aa20.19■□□□□ 0.82
RTN1-209ENST00000611068 ZNF335Q9H4Z2 1342 aaPredicted RBP20.19■□□□□ 0.82
RTN1-209ENST00000611068 CCDC27Q2M243 656 aa20.19■□□□□ 0.82
RTN1-209ENST00000611068 NGEFQ8N5V2 710 aa20.19■□□□□ 0.82
RTN1-209ENST00000611068 ERBB4Q15303 1308 aa20.18■□□□□ 0.82
RTN1-209ENST00000611068 PDIA4P13667 645 aaKnown RBP20.18■□□□□ 0.82
RTN1-209ENST00000611068 USHBP1Q8N6Y0 703 aa20.18■□□□□ 0.82
RTN1-209ENST00000611068 EXOSC9Q06265 439 aaKnown RBP20.18■□□□□ 0.82
RTN1-209ENST00000611068 PEAK1Q9H792 1746 aa20.18■□□□□ 0.82
RTN1-209ENST00000611068 NFE2L2Q16236 605 aa20.17■□□□□ 0.82
RTN1-209ENST00000611068 KRT28Q7Z3Y7 464 aa20.17■□□□□ 0.82
RTN1-209ENST00000611068 CANXP27824 592 aaKnown RBP20.16■□□□□ 0.82
RTN1-209ENST00000611068 C8orf34Q49A92 452 aa20.16■□□□□ 0.82
RTN1-209ENST00000611068 TNNQ9UQP3 1299 aa20.16■□□□□ 0.82
RTN1-209ENST00000611068 STRCP1A6NGW2 1772 aa20.16■□□□□ 0.82
RTN1-209ENST00000611068 ELL2O00472 640 aaPredicted RBP20.16■□□□□ 0.82
RTN1-209ENST00000611068 LMTK3Q96Q04 1460 aa20.15■□□□□ 0.82
RTN1-209ENST00000611068 EYA1Q99502 592 aa20.15■□□□□ 0.82
RTN1-209ENST00000611068 MYH16Q9H6N6 1097 aa20.15■□□□□ 0.82
RTN1-209ENST00000611068 HOXC9P31274 260 aa20.15■□□□□ 0.82
RTN1-209ENST00000611068 GOLGA6L3A6NEY3 463 aa20.14■□□□□ 0.82
RTN1-209ENST00000611068 MCM10Q7L590 875 aa20.13■□□□□ 0.81
RTN1-209ENST00000611068 CLUAP1Q96AJ1 413 aa20.13■□□□□ 0.81
RTN1-209ENST00000611068 CABLES1Q8TDN4 633 aa20.13■□□□□ 0.81
RTN1-209ENST00000611068 PANK1Q8TE04 598 aa20.13■□□□□ 0.81
RTN1-209ENST00000611068 FLT4P35916 1363 aa20.12■□□□□ 0.81
RTN1-209ENST00000611068 FSD2A1L4K1 749 aa20.12■□□□□ 0.81
RTN1-209ENST00000611068 RARSP54136 660 aaKnown RBP20.12■□□□□ 0.81
RTN1-209ENST00000611068 C1orf167Q5SNV9 1468 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms