RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 NOB1Q9ULX3 412 aaKnown RBP13.29□□□□□ -0.28
PABPC1-224ENST00000610907 TOPAZ1Q8N9V7 1692 aa13.29□□□□□ -0.28
PABPC1-224ENST00000610907 ZNF853P0CG23 659 aa13.28□□□□□ -0.28
PABPC1-224ENST00000610907 LTKP29376 864 aa13.28□□□□□ -0.28
PABPC1-224ENST00000610907 RTL5Q5HYW3 569 aaPredicted RBP13.28□□□□□ -0.28
PABPC1-224ENST00000610907 PHACTR3Q96KR7 559 aa13.28□□□□□ -0.28
PABPC1-224ENST00000610907 TTC21BQ7Z4L5 1316 aa13.28□□□□□ -0.28
PABPC1-224ENST00000610907 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.28□□□□□ -0.28
PABPC1-224ENST00000610907 PDZRN3Q9UPQ7 1066 aa13.28□□□□□ -0.28
PABPC1-224ENST00000610907 HMOX1P09601 288 aa13.27□□□□□ -0.29
PABPC1-224ENST00000610907 FBLN1P23142 703 aa13.27□□□□□ -0.29
PABPC1-224ENST00000610907 ACEP12821 1306 aa13.27□□□□□ -0.29
PABPC1-224ENST00000610907 DIP2AQ14689 1571 aa13.26□□□□□ -0.29
PABPC1-224ENST00000610907 NRKQ7Z2Y5 1582 aa13.26□□□□□ -0.29
PABPC1-224ENST00000610907 PTCH1Q13635 1447 aa13.26□□□□□ -0.29
PABPC1-224ENST00000610907 THEMISQ8N1K5 641 aaPredicted RBP13.26□□□□□ -0.29
PABPC1-224ENST00000610907 CFAP44Q96MT7 982 aa13.26□□□□□ -0.29
PABPC1-224ENST00000610907 ZBTB40Q9NUA8 1239 aa13.26□□□□□ -0.29
PABPC1-224ENST00000610907 ZRANB1Q9UGI0 708 aa13.26□□□□□ -0.29
PABPC1-224ENST00000610907 TTC21AQ8NDW8 1320 aa13.26□□□□□ -0.29
PABPC1-224ENST00000610907 OVOS2A0A0J9YW53 1432 aa13.25□□□□□ -0.29
PABPC1-224ENST00000610907 USP6P35125 1406 aa13.25□□□□□ -0.29
PABPC1-224ENST00000610907 OVOS2Q6IE36 1432 aa13.25□□□□□ -0.29
PABPC1-224ENST00000610907 VAMP4O75379 141 aa13.25□□□□□ -0.29
PABPC1-224ENST00000610907 HAP1P54257 671 aaPredicted RBP13.25□□□□□ -0.29
PABPC1-224ENST00000610907 NBR1Q14596 966 aa13.25□□□□□ -0.29
PABPC1-224ENST00000610907 ITPRIPQ8IWB1 547 aa13.25□□□□□ -0.29
PABPC1-224ENST00000610907 NCKAP5LQ9HCH0 1330 aa13.25□□□□□ -0.29
PABPC1-224ENST00000610907 USP31Q70CQ4 1352 aa13.25□□□□□ -0.29
PABPC1-224ENST00000610907 SMC5Q8IY18 1101 aa13.24□□□□□ -0.29
PABPC1-224ENST00000610907 TMEM57Q8N5G2 664 aa13.24□□□□□ -0.29
PABPC1-224ENST00000610907 PIK3R4Q99570 1358 aa13.24□□□□□ -0.29
PABPC1-224ENST00000610907 SSH2Q76I76 1423 aa13.24□□□□□ -0.29
PABPC1-224ENST00000610907 PTPRUQ92729 1446 aa13.24□□□□□ -0.29
PABPC1-224ENST00000610907 RRS1Q15050 365 aaKnown RBP13.24□□□□□ -0.29
PABPC1-224ENST00000610907 UPF2Q9HAU5 1272 aaKnown RBP13.24□□□□□ -0.29
PABPC1-224ENST00000610907 AMOTL2Q9Y2J4 779 aa13.24□□□□□ -0.29
PABPC1-224ENST00000610907 NALCNQ8IZF0 1738 aa13.23□□□□□ -0.29
PABPC1-224ENST00000610907 MRPL50Q8N5N7 158 aaKnown RBP13.23□□□□□ -0.29
PABPC1-224ENST00000610907 LAS1LQ9Y4W2 734 aaKnown RBP13.23□□□□□ -0.29
PABPC1-224ENST00000610907 MBIPQ9NS73 344 aa13.22□□□□□ -0.29
PABPC1-224ENST00000610907 USP19O94966 1318 aa13.22□□□□□ -0.29
PABPC1-224ENST00000610907 CEBPAP49715 358 aaPredicted RBP13.21□□□□□ -0.29
PABPC1-224ENST00000610907 EIF4A2Q14240 407 aaKnown RBP13.21□□□□□ -0.29
PABPC1-224ENST00000610907 KIF24Q5T7B8 1368 aa13.21□□□□□ -0.29
PABPC1-224ENST00000610907 SLC26A8Q96RN1 970 aa13.21□□□□□ -0.29
PABPC1-224ENST00000610907 DLG5Q8TDM6 1919 aa13.21□□□□□ -0.3
PABPC1-224ENST00000610907 TWISTNBQ3B726 338 aaPredicted RBP13.2□□□□□ -0.3
PABPC1-224ENST00000610907 API5Q9BZZ5 524 aaKnown RBP13.2□□□□□ -0.3
PABPC1-224ENST00000610907 FER1L4A9Z1Z3 1794 aa13.2□□□□□ -0.3
PABPC1-224ENST00000610907 ANKARQ7Z5J8 1434 aa13.2□□□□□ -0.3
PABPC1-224ENST00000610907 BECN1Q14457 450 aa13.2□□□□□ -0.3
PABPC1-224ENST00000610907 ZBTB7BO15156 539 aaPredicted RBP13.19□□□□□ -0.3
PABPC1-224ENST00000610907 DEKP35659 375 aaKnown RBP13.19□□□□□ -0.3
PABPC1-224ENST00000610907 RIMS1Q86UR5 1692 aaKnown RBP13.19□□□□□ -0.3
PABPC1-224ENST00000610907 ARHGEF10O15013 1369 aa13.18□□□□□ -0.3
PABPC1-224ENST00000610907 KIAA0232Q92628 1395 aa13.18□□□□□ -0.3
PABPC1-224ENST00000610907 ABCC4O15439 1325 aa13.18□□□□□ -0.3
PABPC1-224ENST00000610907 NUCB1Q02818 461 aa13.18□□□□□ -0.3
PABPC1-224ENST00000610907 SULT6B1Q6IMI4 303 aa13.18□□□□□ -0.3
PABPC1-224ENST00000610907 GCC1Q96CN9 775 aa13.18□□□□□ -0.3
PABPC1-224ENST00000610907 THUMPD2Q9BTF0 503 aaKnown RBP13.18□□□□□ -0.3
PABPC1-224ENST00000610907 RGPD1P0DJD0 1748 aa13.18□□□□□ -0.3
PABPC1-224ENST00000610907 CHL1O00533 1208 aa13.17□□□□□ -0.3
PABPC1-224ENST00000610907 TSPYL6Q8N831 410 aa13.17□□□□□ -0.3
PABPC1-224ENST00000610907 TBC1D32Q96NH3 1257 aa13.17□□□□□ -0.3
PABPC1-224ENST00000610907 SBNO1A3KN83 1393 aa13.17□□□□□ -0.3
PABPC1-224ENST00000610907 XRN1Q8IZH2 1706 aaKnown RBP13.16□□□□□ -0.3
PABPC1-224ENST00000610907 SEC24BO95487 1268 aa13.16□□□□□ -0.3
PABPC1-224ENST00000610907 FLT4P35916 1363 aa13.16□□□□□ -0.3
PABPC1-224ENST00000610907 C8orf58Q8NAV2 365 aa13.15□□□□□ -0.3
PABPC1-224ENST00000610907 NGDNQ8NEJ9 315 aaKnown RBP13.15□□□□□ -0.3
PABPC1-224ENST00000610907 HSP90AB2PQ58FF8 381 aa13.15□□□□□ -0.3
PABPC1-224ENST00000610907 PEAK1Q9H792 1746 aa13.15□□□□□ -0.31
PABPC1-224ENST00000610907 HTATSF1O43719 755 aaKnown RBP13.14□□□□□ -0.31
PABPC1-224ENST00000610907 CHD1LQ86WJ1 897 aa13.14□□□□□ -0.31
PABPC1-224ENST00000610907 AEBP1Q8IUX7 1158 aa13.14□□□□□ -0.31
PABPC1-224ENST00000610907 KDRP35968 1356 aa13.14□□□□□ -0.31
PABPC1-224ENST00000610907 MAP3K19Q56UN5 1328 aa13.13□□□□□ -0.31
PABPC1-224ENST00000610907 NUTM2FA1L443 756 aa13.13□□□□□ -0.31
PABPC1-224ENST00000610907 FAM83GA6ND36 823 aa13.13□□□□□ -0.31
PABPC1-224ENST00000610907 SLC4A3P48751 1232 aa13.13□□□□□ -0.31
PABPC1-224ENST00000610907 KDM4FA0A1W2PPD8 638 aa13.12□□□□□ -0.31
PABPC1-224ENST00000610907 ELL2O00472 640 aaPredicted RBP13.12□□□□□ -0.31
PABPC1-224ENST00000610907 INTS3Q68E01 1043 aaKnown RBP13.12□□□□□ -0.31
PABPC1-224ENST00000610907 USP54Q70EL1 1684 aa13.12□□□□□ -0.31
PABPC1-224ENST00000610907 PTPRCP08575 1304 aa13.12□□□□□ -0.31
PABPC1-224ENST00000610907 FMN2Q9NZ56 1722 aa13.12□□□□□ -0.31
PABPC1-224ENST00000610907 EIF5BO60841 1220 aaKnown RBP13.11□□□□□ -0.31
PABPC1-224ENST00000610907 DCTN1Q14203 1278 aa13.11□□□□□ -0.31
PABPC1-224ENST00000610907 NFKBIBQ15653 356 aa13.11□□□□□ -0.31
PABPC1-224ENST00000610907 GAS2L2Q8NHY3 880 aa13.11□□□□□ -0.31
PABPC1-224ENST00000610907 IGSF1Q8N6C5 1336 aa13.11□□□□□ -0.31
PABPC1-224ENST00000610907 CRB1P82279 1406 aa13.11□□□□□ -0.31
PABPC1-224ENST00000610907 CEP170BQ9Y4F5 1589 aaPredicted RBP13.11□□□□□ -0.31
PABPC1-224ENST00000610907 AMPHP49418 695 aa13.11□□□□□ -0.31
PABPC1-224ENST00000610907 BMP2KLQ5H9B9 411 aa13.1□□□□□ -0.31
PABPC1-224ENST00000610907 RTF1Q92541 710 aaKnown RBP13.1□□□□□ -0.31
PABPC1-224ENST00000610907 KCNA6P17658 529 aa13.09□□□□□ -0.31
PABPC1-224ENST00000610907 C22orf23Q9BZE7 217 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms