RNA–Protein interactions for RNA: ENST00000610288.4

COL25A1-208, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL25A1, Length 4,799 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-208ENST00000610288 C1orf115Q9H7X2 142 aa10.85□□□□□ -0.67
COL25A1-208ENST00000610288 NLRP2Q9NX02 1062 aa10.85□□□□□ -0.67
COL25A1-208ENST00000610288 PLCD3Q8N3E9 789 aa10.85□□□□□ -0.67
COL25A1-208ENST00000610288 TNMDQ9H2S6 317 aa10.85□□□□□ -0.67
COL25A1-208ENST00000610288 HSP90AB3PQ58FF7 597 aa10.85□□□□□ -0.67
COL25A1-208ENST00000610288 RUFY1Q96T51 708 aa10.85□□□□□ -0.67
COL25A1-208ENST00000610288 C9orf84Q5VXU9 1444 aa10.85□□□□□ -0.67
COL25A1-208ENST00000610288 PRIMPOLQ96LW4 560 aa10.85□□□□□ -0.67
COL25A1-208ENST00000610288 OLFM4Q6UX06 510 aa10.84□□□□□ -0.67
COL25A1-208ENST00000610288 PRAM1Q96QH2 718 aa10.84□□□□□ -0.67
COL25A1-208ENST00000610288 KIF2AO00139 706 aaPredicted RBP10.84□□□□□ -0.67
COL25A1-208ENST00000610288 SSFA2P28290 1259 aa10.84□□□□□ -0.67
COL25A1-208ENST00000610288 NEUROD6Q96NK8 337 aa10.84□□□□□ -0.67
COL25A1-208ENST00000610288 CCDC94Q9BW85 323 aaPredicted RBP10.84□□□□□ -0.67
COL25A1-208ENST00000610288 RPRD2Q5VT52 1461 aaKnown RBP10.84□□□□□ -0.67
COL25A1-208ENST00000610288 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.83□□□□□ -0.68
COL25A1-208ENST00000610288 C8orf34Q49A92 452 aa10.83□□□□□ -0.68
COL25A1-208ENST00000610288 GPATCH11Q8N954 259 aa10.83□□□□□ -0.68
COL25A1-208ENST00000610288 FBXW7Q969H0 707 aa10.83□□□□□ -0.68
COL25A1-208ENST00000610288 POLA1P09884 1462 aaPredicted RBP10.83□□□□□ -0.68
COL25A1-208ENST00000610288 SMC2O95347 1197 aa10.83□□□□□ -0.68
COL25A1-208ENST00000610288 VPS37DQ86XT2 251 aa10.83□□□□□ -0.68
COL25A1-208ENST00000610288 CLASRPQ8N2M8 674 aaKnown RBP10.83□□□□□ -0.68
COL25A1-208ENST00000610288 NOL10Q9BSC4 688 aaKnown RBP10.83□□□□□ -0.68
COL25A1-208ENST00000610288 CEP89Q96ST8 783 aa10.83□□□□□ -0.68
COL25A1-208ENST00000610288 HIP1O00291 1037 aa10.82□□□□□ -0.68
COL25A1-208ENST00000610288 SURF6O75683 361 aaKnown RBP10.82□□□□□ -0.68
COL25A1-208ENST00000610288 PPP4R3BQ5MIZ7 849 aa10.82□□□□□ -0.68
COL25A1-208ENST00000610288 AMOTL1Q8IY63 956 aa10.82□□□□□ -0.68
COL25A1-208ENST00000610288 GAS2L2Q8NHY3 880 aa10.82□□□□□ -0.68
COL25A1-208ENST00000610288 NUP62CLQ9H1M0 184 aa10.82□□□□□ -0.68
COL25A1-208ENST00000610288 CDR1P51861 262 aa10.82□□□□□ -0.68
COL25A1-208ENST00000610288 RPAP2Q8IXW5 612 aaPredicted RBP10.82□□□□□ -0.68
COL25A1-208ENST00000610288 PANK2Q9BZ23 570 aa10.82□□□□□ -0.68
COL25A1-208ENST00000610288 SRCIN1Q9C0H9 1055 aa10.82□□□□□ -0.68
COL25A1-208ENST00000610288 MRC2Q9UBG0 1479 aa10.82□□□□□ -0.68
COL25A1-208ENST00000610288 BAG4O95429 457 aaKnown RBP10.82□□□□□ -0.68
COL25A1-208ENST00000610288 GNAI2P04899 355 aa10.82□□□□□ -0.68
COL25A1-208ENST00000610288 CCDC30Q5VVM6 783 aa10.82□□□□□ -0.68
COL25A1-208ENST00000610288 NFXL1Q6ZNB6 911 aa10.82□□□□□ -0.68
COL25A1-208ENST00000610288 TMEM57Q8N5G2 664 aa10.82□□□□□ -0.68
COL25A1-208ENST00000610288 TROQ12816 1431 aaPredicted RBP10.82□□□□□ -0.68
COL25A1-208ENST00000610288 CCDC183Q5T5S1 534 aa10.82□□□□□ -0.68
COL25A1-208ENST00000610288 ZNF396Q96N95 335 aaPredicted RBP10.82□□□□□ -0.68
COL25A1-208ENST00000610288 CYP46A1Q9Y6A2 500 aa10.82□□□□□ -0.68
COL25A1-208ENST00000610288 BRD2P25440 801 aaKnown RBP10.81□□□□□ -0.68
COL25A1-208ENST00000610288 PIP4K2BP78356 416 aa10.81□□□□□ -0.68
COL25A1-208ENST00000610288 HS1BP3Q53T59 392 aa10.81□□□□□ -0.68
COL25A1-208ENST00000610288 IPO4Q8TEX9 1081 aaKnown RBP10.81□□□□□ -0.68
COL25A1-208ENST00000610288 CC2D2AQ9P2K1 1620 aa10.81□□□□□ -0.68
COL25A1-208ENST00000610288 ANKRD1Q15327 319 aa10.81□□□□□ -0.68
COL25A1-208ENST00000610288 ABTB2Q8N961 1025 aa10.81□□□□□ -0.68
COL25A1-208ENST00000610288 ZSCAN31Q96LW9 406 aaPredicted RBP10.81□□□□□ -0.68
COL25A1-208ENST00000610288 GPRASP1Q5JY77 1395 aa10.81□□□□□ -0.68
COL25A1-208ENST00000610288 SSR1P43307 286 aaKnown RBP10.81□□□□□ -0.68
COL25A1-208ENST00000610288 RALYLQ86SE5 291 aaKnown RBP10.81□□□□□ -0.68
COL25A1-208ENST00000610288 PLEKHH1Q9ULM0 1364 aa10.81□□□□□ -0.68
COL25A1-208ENST00000610288 FOSBP53539 338 aa10.81□□□□□ -0.68
COL25A1-208ENST00000610288 PDILTQ8N807 584 aa10.81□□□□□ -0.68
COL25A1-208ENST00000610288 EIF3JO75822 258 aaKnown RBP10.8□□□□□ -0.68
COL25A1-208ENST00000610288 MAP3K11Q16584 847 aa10.8□□□□□ -0.68
COL25A1-208ENST00000610288 WASHC4Q2M389 1173 aa10.8□□□□□ -0.68
COL25A1-208ENST00000610288 THEMISQ8N1K5 641 aaPredicted RBP10.8□□□□□ -0.68
COL25A1-208ENST00000610288 CCDC47Q96A33 483 aaKnown RBP10.8□□□□□ -0.68
COL25A1-208ENST00000610288 RAD21O60216 631 aa10.8□□□□□ -0.68
COL25A1-208ENST00000610288 IGHDP01880 384 aa10.8□□□□□ -0.68
COL25A1-208ENST00000610288 UVSSAQ2YD98 709 aa10.8□□□□□ -0.68
COL25A1-208ENST00000610288 BMP2KLQ5H9B9 411 aa10.8□□□□□ -0.68
COL25A1-208ENST00000610288 LRRCC1Q9C099 1032 aa10.8□□□□□ -0.68
COL25A1-208ENST00000610288 ERLIN1O75477 346 aa10.8□□□□□ -0.68
COL25A1-208ENST00000610288 CCT4P50991 539 aaKnown RBP10.8□□□□□ -0.68
COL25A1-208ENST00000610288 CABP1Q9NZU7 370 aa10.8□□□□□ -0.68
COL25A1-208ENST00000610288 PCF11O94913 1555 aaKnown RBP10.8□□□□□ -0.68
COL25A1-208ENST00000610288 HECW1Q76N89 1606 aa10.8□□□□□ -0.68
COL25A1-208ENST00000610288 NUTM2BA6NNL0 878 aaPredicted RBP10.8□□□□□ -0.68
COL25A1-208ENST00000610288 NUTM2EB1AL46 878 aaPredicted RBP10.8□□□□□ -0.68
COL25A1-208ENST00000610288 OFD1O75665 1012 aa10.8□□□□□ -0.68
COL25A1-208ENST00000610288 SAFBQ15424 915 aaKnown RBP eCLIP10.8□□□□□ -0.68
COL25A1-208ENST00000610288 LARP1BQ659C4 914 aaKnown RBP10.8□□□□□ -0.68
COL25A1-208ENST00000610288 NUTM2AQ8IVF1 878 aaPredicted RBP10.8□□□□□ -0.68
COL25A1-208ENST00000610288 FAM107BQ9H098 131 aa10.8□□□□□ -0.68
COL25A1-208ENST00000610288 ERICH2A1L162 156 aa10.79□□□□□ -0.68
COL25A1-208ENST00000610288 KIAA0754O94854 1291 aa10.79□□□□□ -0.68
COL25A1-208ENST00000610288 UBXN4Q92575 508 aa10.79□□□□□ -0.68
COL25A1-208ENST00000610288 FSD1Q9BTV5 496 aa10.79□□□□□ -0.68
COL25A1-208ENST00000610288 PTPN23Q9H3S7 1636 aa10.79□□□□□ -0.68
COL25A1-208ENST00000610288 DHX16O60231 1041 aaKnown RBP10.79□□□□□ -0.68
COL25A1-208ENST00000610288 DCTN1Q14203 1278 aa10.79□□□□□ -0.68
COL25A1-208ENST00000610288 SULT6B1Q6IMI4 303 aa10.79□□□□□ -0.68
COL25A1-208ENST00000610288 CEP57L1Q8IYX8 460 aa10.79□□□□□ -0.68
COL25A1-208ENST00000610288 FMNL2Q96PY5 1086 aa10.79□□□□□ -0.68
COL25A1-208ENST00000610288 PPP6R1Q9UPN7 881 aa10.79□□□□□ -0.68
COL25A1-208ENST00000610288 PTPN14Q15678 1187 aa10.78□□□□□ -0.68
COL25A1-208ENST00000610288 PCMTD1Q96MG8 357 aaPredicted RBP10.78□□□□□ -0.68
COL25A1-208ENST00000610288 CDK19Q9BWU1 502 aa10.78□□□□□ -0.68
COL25A1-208ENST00000610288 ABCC11Q96J66 1382 aa10.78□□□□□ -0.68
COL25A1-208ENST00000610288 TERF1P54274 439 aa10.78□□□□□ -0.68
COL25A1-208ENST00000610288 ALDH1L2Q3SY69 923 aa10.78□□□□□ -0.68
COL25A1-208ENST00000610288 ZKSCAN5Q9Y2L8 839 aa10.78□□□□□ -0.68
COL25A1-208ENST00000610288 USP25Q9UHP3 1055 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms