RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 CLCN1P35523 988 aa18.35■□□□□ 0.53
CTCFL-219ENST00000608720 PIK3R4Q99570 1358 aa18.35■□□□□ 0.53
CTCFL-219ENST00000608720 DLC1Q96QB1 1528 aa18.34■□□□□ 0.53
CTCFL-219ENST00000608720 MYO5BQ9ULV0 1848 aa18.34■□□□□ 0.53
CTCFL-219ENST00000608720 PHACTR3Q96KR7 559 aa18.34■□□□□ 0.53
CTCFL-219ENST00000608720 PPP6R1Q9UPN7 881 aa18.33■□□□□ 0.53
CTCFL-219ENST00000608720 PTCH1Q13635 1447 aa18.33■□□□□ 0.52
CTCFL-219ENST00000608720 KIF20BQ96Q89 1820 aa18.33■□□□□ 0.52
CTCFL-219ENST00000608720 ZNF853P0CG23 659 aa18.33■□□□□ 0.52
CTCFL-219ENST00000608720 IL13P35225 146 aa18.33■□□□□ 0.52
CTCFL-219ENST00000608720 ANKRD45Q5TZF3 282 aa18.33■□□□□ 0.52
CTCFL-219ENST00000608720 GOLGA6L3A6NEY3 463 aa18.32■□□□□ 0.52
CTCFL-219ENST00000608720 HMOX1P09601 288 aa18.32■□□□□ 0.52
CTCFL-219ENST00000608720 LMOD3Q0VAK6 560 aa18.32■□□□□ 0.52
CTCFL-219ENST00000608720 WAPLQ7Z5K2 1190 aa18.32■□□□□ 0.52
CTCFL-219ENST00000608720 FBLN1P23142 703 aa18.31■□□□□ 0.52
CTCFL-219ENST00000608720 ZNF692Q9BU19 519 aaPredicted RBP18.31■□□□□ 0.52
CTCFL-219ENST00000608720 NCOA3Q9Y6Q9 1424 aa18.31■□□□□ 0.52
CTCFL-219ENST00000608720 FSD2A1L4K1 749 aa18.31■□□□□ 0.52
CTCFL-219ENST00000608720 DDX11L8A8MPP1 907 aa18.31■□□□□ 0.52
CTCFL-219ENST00000608720 TRAK2O60296 914 aa18.31■□□□□ 0.52
CTCFL-219ENST00000608720 DDIT3P35638 169 aa18.3■□□□□ 0.52
CTCFL-219ENST00000608720 EDC4Q6P2E9 1401 aaKnown RBP18.3■□□□□ 0.52
CTCFL-219ENST00000608720 TSPYL6Q8N831 410 aa18.3■□□□□ 0.52
CTCFL-219ENST00000608720 THUMPD2Q9BTF0 503 aaKnown RBP18.3■□□□□ 0.52
CTCFL-219ENST00000608720 ZMYND15Q9H091 742 aa18.3■□□□□ 0.52
CTCFL-219ENST00000608720 MBIPQ9NS73 344 aa18.3■□□□□ 0.52
CTCFL-219ENST00000608720 CIZ1Q9ULV3 898 aaPredicted RBP18.3■□□□□ 0.52
CTCFL-219ENST00000608720 ABCC4O15439 1325 aa18.3■□□□□ 0.52
CTCFL-219ENST00000608720 AATKQ6ZMQ8 1374 aa18.29■□□□□ 0.52
CTCFL-219ENST00000608720 API5Q9BZZ5 524 aaKnown RBP18.29■□□□□ 0.52
CTCFL-219ENST00000608720 EMILIN1Q9Y6C2 1016 aa18.29■□□□□ 0.52
CTCFL-219ENST00000608720 CPSF1Q10570 1443 aaKnown RBP18.29■□□□□ 0.52
CTCFL-219ENST00000608720 HSP90AA2PQ14568 343 aaPredicted RBP18.29■□□□□ 0.52
CTCFL-219ENST00000608720 CFAP44Q96MT7 982 aa18.29■□□□□ 0.52
CTCFL-219ENST00000608720 WASLO00401 505 aaPredicted RBP18.28■□□□□ 0.52
CTCFL-219ENST00000608720 MLECQ14165 292 aa18.28■□□□□ 0.52
CTCFL-219ENST00000608720 TWISTNBQ3B726 338 aaPredicted RBP18.28■□□□□ 0.52
CTCFL-219ENST00000608720 HSP90AA1P07900 732 aaKnown RBP18.27■□□□□ 0.52
CTCFL-219ENST00000608720 XRCC6P12956 609 aaKnown RBP eCLIP18.27■□□□□ 0.52
CTCFL-219ENST00000608720 CDK12Q9NYV4 1490 aaPredicted RBP18.27■□□□□ 0.51
CTCFL-219ENST00000608720 A2ML1A8K2U0 1454 aa18.26■□□□□ 0.51
CTCFL-219ENST00000608720 RIMS2Q9UQ26 1411 aa18.26■□□□□ 0.51
CTCFL-219ENST00000608720 C1orf115Q9H7X2 142 aa18.26■□□□□ 0.51
CTCFL-219ENST00000608720 KIF24Q5T7B8 1368 aa18.26■□□□□ 0.51
CTCFL-219ENST00000608720 HSP90AB1P08238 724 aaKnown RBP18.26■□□□□ 0.51
CTCFL-219ENST00000608720 NME9Q86XW9 330 aa18.26■□□□□ 0.51
CTCFL-219ENST00000608720 SIRT2Q8IXJ6 389 aa18.26■□□□□ 0.51
CTCFL-219ENST00000608720 VSIG10Q8N0Z9 540 aa18.26■□□□□ 0.51
CTCFL-219ENST00000608720 ELL2O00472 640 aaPredicted RBP18.25■□□□□ 0.51
CTCFL-219ENST00000608720 COG3Q96JB2 828 aa18.25■□□□□ 0.51
CTCFL-219ENST00000608720 GZF1Q9H116 711 aaPredicted RBP18.25■□□□□ 0.51
CTCFL-219ENST00000608720 KIF2CQ99661 725 aa18.25■□□□□ 0.51
CTCFL-219ENST00000608720 TBC1D9Q6ZT07 1266 aa18.24■□□□□ 0.51
CTCFL-219ENST00000608720 C8orf58Q8NAV2 365 aa18.24■□□□□ 0.51
CTCFL-219ENST00000608720 ISY1Q9ULR0 285 aaKnown RBP18.24■□□□□ 0.51
CTCFL-219ENST00000608720 NAP1L5Q96NT1 182 aaPredicted RBP18.23■□□□□ 0.51
CTCFL-219ENST00000608720 PTMSP20962 102 aa18.22■□□□□ 0.51
CTCFL-219ENST00000608720 MRE11P49959 708 aa18.22■□□□□ 0.51
CTCFL-219ENST00000608720 PLPPR3Q6T4P5 718 aa18.22■□□□□ 0.51
CTCFL-219ENST00000608720 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.22■□□□□ 0.51
CTCFL-219ENST00000608720 SIRT1Q96EB6 747 aa18.22■□□□□ 0.51
CTCFL-219ENST00000608720 GBP4Q96PP9 640 aa18.22■□□□□ 0.51
CTCFL-219ENST00000608720 CDC45O75419 566 aa18.22■□□□□ 0.51
CTCFL-219ENST00000608720 TNPO1Q92973 898 aaKnown RBP18.22■□□□□ 0.51
CTCFL-219ENST00000608720 NUDT16Q96DE0 195 aaKnown RBP18.22■□□□□ 0.51
CTCFL-219ENST00000608720 REREQ9P2R6 1566 aa18.22■□□□□ 0.51
CTCFL-219ENST00000608720 CCDC61Q9Y6R9 512 aa18.22■□□□□ 0.51
CTCFL-219ENST00000608720 HAP1P54257 671 aaPredicted RBP18.21■□□□□ 0.51
CTCFL-219ENST00000608720 RAB3GAP1Q15042 981 aa18.21■□□□□ 0.51
CTCFL-219ENST00000608720 ZRANB1Q9UGI0 708 aa18.21■□□□□ 0.51
CTCFL-219ENST00000608720 AGLP35573 1532 aa18.21■□□□□ 0.51
CTCFL-219ENST00000608720 K7ELQ4 463 aaPredicted RBP18.19■□□□□ 0.5
CTCFL-219ENST00000608720 SKOR2Q2VWA4 1001 aaPredicted RBP18.19■□□□□ 0.5
CTCFL-219ENST00000608720 DCTPP1Q9H773 170 aa18.19■□□□□ 0.5
CTCFL-219ENST00000608720 MAP2P11137 1827 aaKnown RBP18.19■□□□□ 0.5
CTCFL-219ENST00000608720 SPATA31D1Q6ZQQ2 1576 aa18.19■□□□□ 0.5
CTCFL-219ENST00000608720 RRS1Q15050 365 aaKnown RBP18.18■□□□□ 0.5
CTCFL-219ENST00000608720 INTS3Q68E01 1043 aaKnown RBP18.18■□□□□ 0.5
CTCFL-219ENST00000608720 ARXQ96QS3 562 aa18.18■□□□□ 0.5
CTCFL-219ENST00000608720 FAM83GA6ND36 823 aa18.18■□□□□ 0.5
CTCFL-219ENST00000608720 TXNDC2Q86VQ3 553 aa18.18■□□□□ 0.5
CTCFL-219ENST00000608720 PLEKHM2Q8IWE5 1019 aa18.17■□□□□ 0.5
CTCFL-219ENST00000608720 METP08581 1390 aa18.17■□□□□ 0.5
CTCFL-219ENST00000608720 HDGFP51858 240 aaKnown RBP18.16■□□□□ 0.5
CTCFL-219ENST00000608720 SETD1AO15047 1707 aaKnown RBP18.16■□□□□ 0.5
CTCFL-219ENST00000608720 PANK2Q9BZ23 570 aa18.15■□□□□ 0.5
CTCFL-219ENST00000608720 GRPEL1Q9HAV7 217 aa18.15■□□□□ 0.5
CTCFL-219ENST00000608720 CD2BP2O95400 341 aaKnown RBP18.15■□□□□ 0.5
CTCFL-219ENST00000608720 GSPT1P15170 499 aaKnown RBP18.15■□□□□ 0.5
CTCFL-219ENST00000608720 DCTN1Q14203 1278 aa18.15■□□□□ 0.5
CTCFL-219ENST00000608720 RPAP2Q8IXW5 612 aaPredicted RBP18.15■□□□□ 0.5
CTCFL-219ENST00000608720 ANKRD44Q8N8A2 993 aa18.15■□□□□ 0.5
CTCFL-219ENST00000608720 CPS1P31327 1500 aa18.14■□□□□ 0.49
CTCFL-219ENST00000608720 TTC22Q5TAA0 569 aa18.14■□□□□ 0.49
CTCFL-219ENST00000608720 CHL1O00533 1208 aa18.13■□□□□ 0.49
CTCFL-219ENST00000608720 RABEP1Q15276 862 aa18.13■□□□□ 0.49
CTCFL-219ENST00000608720 TECPR2O15040 1411 aa18.13■□□□□ 0.49
CTCFL-219ENST00000608720 TPM2P07951 284 aa18.13■□□□□ 0.49
CTCFL-219ENST00000608720 RBM42Q9BTD8 480 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms