RNA–Protein interactions for RNA: ENST00000605166.1

HMGB1P51-201, Transcript of high mobility group box 1 pseudogene 51, humanhuman

BASIC

Gene HMGB1P51, Length 638 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P51-201ENST00000605166 ZNF598Q86UK7 904 aaKnown RBP9.28□□□□□ -0.92
HMGB1P51-201ENST00000605166 GPKOWQ92917 476 aaPredicted RBP eCLIP9.28□□□□□ -0.92
HMGB1P51-201ENST00000605166 ZBTB24O43167 697 aaPredicted RBP9.27□□□□□ -0.93
HMGB1P51-201ENST00000605166 RPIAP49247 311 aa9.27□□□□□ -0.93
HMGB1P51-201ENST00000605166 SPRYD7Q5W111 196 aa9.27□□□□□ -0.93
HMGB1P51-201ENST00000605166 ARMC2Q8NEN0 867 aa9.27□□□□□ -0.93
HMGB1P51-201ENST00000605166 FAM174AQ8TBP5 190 aa9.27□□□□□ -0.93
HMGB1P51-201ENST00000605166 STK32AQ8WU08 396 aa9.27□□□□□ -0.93
HMGB1P51-201ENST00000605166 PDZRN3Q9UPQ7 1066 aa9.27□□□□□ -0.93
HMGB1P51-201ENST00000605166 NRG2O14511 850 aaPredicted RBP9.26□□□□□ -0.93
HMGB1P51-201ENST00000605166 CTHP32929 405 aa9.26□□□□□ -0.93
HMGB1P51-201ENST00000605166 PTK2Q05397 1052 aa9.26□□□□□ -0.93
HMGB1P51-201ENST00000605166 CCER1Q8TC90 406 aaPredicted RBP9.26□□□□□ -0.93
HMGB1P51-201ENST00000605166 ZNF428Q96B54 188 aa9.26□□□□□ -0.93
HMGB1P51-201ENST00000605166 FCF1Q9Y324 198 aaKnown RBP9.26□□□□□ -0.93
HMGB1P51-201ENST00000605166 USP17L15C9J2P7 530 aa9.25□□□□□ -0.93
HMGB1P51-201ENST00000605166 USP17L10C9JJH3 530 aa9.25□□□□□ -0.93
HMGB1P51-201ENST00000605166 USP17L13C9JLJ4 530 aa9.25□□□□□ -0.93
HMGB1P51-201ENST00000605166 USP17L12C9JPN9 530 aa9.25□□□□□ -0.93
HMGB1P51-201ENST00000605166 USP17L11C9JVI0 530 aa9.25□□□□□ -0.93
HMGB1P51-201ENST00000605166 USP17L21D6R901 530 aa9.25□□□□□ -0.93
HMGB1P51-201ENST00000605166 USP17L18D6R9N7 530 aa9.25□□□□□ -0.93
HMGB1P51-201ENST00000605166 USP17L22D6RA61 530 aa9.25□□□□□ -0.93
HMGB1P51-201ENST00000605166 USP17L17D6RBQ6 530 aa9.25□□□□□ -0.93
HMGB1P51-201ENST00000605166 USP17L19D6RCP7 530 aa9.25□□□□□ -0.93
HMGB1P51-201ENST00000605166 USP17L20D6RJB6 530 aa9.25□□□□□ -0.93
HMGB1P51-201ENST00000605166 LZTS3O60299 673 aaPredicted RBP9.25□□□□□ -0.93
HMGB1P51-201ENST00000605166 USP17L24Q0WX57 530 aa9.25□□□□□ -0.93
HMGB1P51-201ENST00000605166 SLFNL1Q499Z3 407 aa9.25□□□□□ -0.93
HMGB1P51-201ENST00000605166 PDXDC2PQ6P474 469 aa9.25□□□□□ -0.93
HMGB1P51-201ENST00000605166 Q6ZNB5 142 aa9.25□□□□□ -0.93
HMGB1P51-201ENST00000605166 LIAT1Q6ZQX7 453 aa9.25□□□□□ -0.93
HMGB1P51-201ENST00000605166 CEP126Q9P2H0 1117 aa9.25□□□□□ -0.93
HMGB1P51-201ENST00000605166 MKRN1Q9UHC7 482 aaKnown RBP9.25□□□□□ -0.93
HMGB1P51-201ENST00000605166 ATP5J2-PTCD1G3V325 749 aa9.24□□□□□ -0.93
HMGB1P51-201ENST00000605166 CCNYL3P0C7X3 344 aa9.24□□□□□ -0.93
HMGB1P51-201ENST00000605166 MMP16P51512 607 aa9.24□□□□□ -0.93
HMGB1P51-201ENST00000605166 TXNDC2Q86VQ3 553 aa9.24□□□□□ -0.93
HMGB1P51-201ENST00000605166 DEPDC4Q8N2C3 294 aa9.24□□□□□ -0.93
HMGB1P51-201ENST00000605166 EVA1BQ9NVM1 165 aa9.24□□□□□ -0.93
HMGB1P51-201ENST00000605166 CRTC2Q53ET0 693 aaPredicted RBP9.23□□□□□ -0.93
HMGB1P51-201ENST00000605166 ZNF697Q5TEC3 545 aa9.23□□□□□ -0.93
HMGB1P51-201ENST00000605166 NBPF14Q5TI25 921 aa9.23□□□□□ -0.93
HMGB1P51-201ENST00000605166 LARP1Q6PKG0 1096 aaKnown RBP9.23□□□□□ -0.93
HMGB1P51-201ENST00000605166 E9PSI1 815 aa9.22□□□□□ -0.93
HMGB1P51-201ENST00000605166 DXOO77932 396 aaKnown RBP9.22□□□□□ -0.93
HMGB1P51-201ENST00000605166 KCNH2Q12809 1159 aa9.22□□□□□ -0.93
HMGB1P51-201ENST00000605166 PTK7Q13308 1070 aa9.22□□□□□ -0.93
HMGB1P51-201ENST00000605166 NCOA4Q13772 614 aa9.22□□□□□ -0.93
HMGB1P51-201ENST00000605166 PHLDB3Q6NSJ2 640 aa9.22□□□□□ -0.93
HMGB1P51-201ENST00000605166 RNF135Q8IUD6 432 aa9.22□□□□□ -0.93
HMGB1P51-201ENST00000605166 PHTF2Q8N3S3 785 aa9.22□□□□□ -0.93
HMGB1P51-201ENST00000605166 PRDM9Q9NQV7 894 aa9.22□□□□□ -0.93
HMGB1P51-201ENST00000605166 RASA1P20936 1047 aa9.21□□□□□ -0.94
HMGB1P51-201ENST00000605166 SSFA2P28290 1259 aa9.21□□□□□ -0.94
HMGB1P51-201ENST00000605166 MAP7D1Q3KQU3 841 aa9.21□□□□□ -0.94
HMGB1P51-201ENST00000605166 PLPP7Q8NBV4 271 aa9.21□□□□□ -0.94
HMGB1P51-201ENST00000605166 FAM200AQ8TCP9 573 aa9.21□□□□□ -0.94
HMGB1P51-201ENST00000605166 NUDT12Q9BQG2 462 aa9.21□□□□□ -0.94
HMGB1P51-201ENST00000605166 OCSTAMPQ9BR26 566 aa9.21□□□□□ -0.94
HMGB1P51-201ENST00000605166 CHIC2Q9UKJ5 165 aa9.21□□□□□ -0.94
HMGB1P51-201ENST00000605166 PCDHB9Q9Y5E1 797 aa9.21□□□□□ -0.94
HMGB1P51-201ENST00000605166 ARID4AP29374 1257 aaPredicted RBP9.2□□□□□ -0.94
HMGB1P51-201ENST00000605166 PRR20EP86478 221 aa9.2□□□□□ -0.94
HMGB1P51-201ENST00000605166 PRR20CP86479 221 aa9.2□□□□□ -0.94
HMGB1P51-201ENST00000605166 PRR20DP86480 221 aa9.2□□□□□ -0.94
HMGB1P51-201ENST00000605166 PRR20BP86481 221 aa9.2□□□□□ -0.94
HMGB1P51-201ENST00000605166 PRR20AP86496 221 aa9.2□□□□□ -0.94
HMGB1P51-201ENST00000605166 PLA2G2CQ5R387 149 aa9.2□□□□□ -0.94
HMGB1P51-201ENST00000605166 CLP1Q92989 425 aaKnown RBP9.2□□□□□ -0.94
HMGB1P51-201ENST00000605166 EMID1Q96A84 441 aaPredicted RBP9.2□□□□□ -0.94
HMGB1P51-201ENST00000605166 CDCA7Q9BWT1 371 aaPredicted RBP9.2□□□□□ -0.94
HMGB1P51-201ENST00000605166 FAM69CQ0P6D2 419 aa9.19□□□□□ -0.94
HMGB1P51-201ENST00000605166 EML3Q32P44 896 aa9.18□□□□□ -0.94
HMGB1P51-201ENST00000605166 ANKMY2Q8IV38 441 aa9.18□□□□□ -0.94
HMGB1P51-201ENST00000605166 CCDC24Q8N4L8 307 aa9.18□□□□□ -0.94
HMGB1P51-201ENST00000605166 SWI5Q1ZZU3 235 aa9.17□□□□□ -0.94
HMGB1P51-201ENST00000605166 ADAM32Q8TC27 787 aa9.17□□□□□ -0.94
HMGB1P51-201ENST00000605166 ARHGAP9Q9BRR9 750 aa9.17□□□□□ -0.94
HMGB1P51-201ENST00000605166 SLAIN2Q9P270 581 aa9.17□□□□□ -0.94
HMGB1P51-201ENST00000605166 TRAF7Q6Q0C0 670 aa9.16□□□□□ -0.94
HMGB1P51-201ENST00000605166 TRIM50Q86XT4 487 aa9.16□□□□□ -0.94
HMGB1P51-201ENST00000605166 OGFOD1Q8N543 542 aa9.16□□□□□ -0.94
HMGB1P51-201ENST00000605166 ATP1A2P50993 1020 aa9.15□□□□□ -0.94
HMGB1P51-201ENST00000605166 GDF9O60383 454 aa9.14□□□□□ -0.95
HMGB1P51-201ENST00000605166 DGAT1O75907 488 aa9.14□□□□□ -0.95
HMGB1P51-201ENST00000605166 ERCC3P19447 782 aa9.14□□□□□ -0.95
HMGB1P51-201ENST00000605166 ATP2B4P23634 1241 aa9.14□□□□□ -0.95
HMGB1P51-201ENST00000605166 DPYDQ12882 1025 aa9.14□□□□□ -0.95
HMGB1P51-201ENST00000605166 FOXC1Q12948 553 aa9.14□□□□□ -0.95
HMGB1P51-201ENST00000605166 PKDCCQ504Y2 493 aa9.14□□□□□ -0.95
HMGB1P51-201ENST00000605166 SH3BP5LQ7L8J4 393 aa9.14□□□□□ -0.95
HMGB1P51-201ENST00000605166 ZBTB33Q86T24 672 aa9.14□□□□□ -0.95
HMGB1P51-201ENST00000605166 NOD1Q9Y239 953 aa9.14□□□□□ -0.95
HMGB1P51-201ENST00000605166 CLDN10P78369 228 aa9.13□□□□□ -0.95
HMGB1P51-201ENST00000605166 TRIM32Q13049 653 aa9.13□□□□□ -0.95
HMGB1P51-201ENST00000605166 TRIM67Q6ZTA4 783 aa9.13□□□□□ -0.95
HMGB1P51-201ENST00000605166 LARGE2Q8N3Y3 721 aa9.13□□□□□ -0.95
HMGB1P51-201ENST00000605166 DNAAF2Q9NVR5 837 aaKnown RBP9.13□□□□□ -0.95
HMGB1P51-201ENST00000605166 SOWAHDA6NJG2 315 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms