RNA–Protein interactions for RNA: ENST00000604724.5

LINC01235-201, Transcript of long intergenic non-protein coding RNA 1235, humanhuman

TSL 2 BASIC

Gene LINC01235, Length 2,328 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01235-201ENST00000604724 DLG5Q8TDM6 1919 aa14.05□□□□□ -0.16
LINC01235-201ENST00000604724 NEFMP07197 916 aa14.04□□□□□ -0.16
LINC01235-201ENST00000604724 EXOSC9Q06265 439 aaKnown RBP14.04□□□□□ -0.16
LINC01235-201ENST00000604724 FRAT1Q92837 279 aaPredicted RBP14.04□□□□□ -0.16
LINC01235-201ENST00000604724 THUMPD2Q9BTF0 503 aaKnown RBP14.04□□□□□ -0.16
LINC01235-201ENST00000604724 IL16Q14005 1332 aa14.04□□□□□ -0.16
LINC01235-201ENST00000604724 NWD1Q149M9 1564 aa14.04□□□□□ -0.16
LINC01235-201ENST00000604724 RGPD1P0DJD0 1748 aa14.04□□□□□ -0.16
LINC01235-201ENST00000604724 NLRP6P59044 892 aa14.03□□□□□ -0.16
LINC01235-201ENST00000604724 PANK1Q8TE04 598 aa14.03□□□□□ -0.16
LINC01235-201ENST00000604724 PHF8Q9UPP1 1060 aa14.03□□□□□ -0.16
LINC01235-201ENST00000604724 TNNQ9UQP3 1299 aa14.03□□□□□ -0.16
LINC01235-201ENST00000604724 CANXP27824 592 aaKnown RBP14.03□□□□□ -0.16
LINC01235-201ENST00000604724 PAK3O75914 559 aaPredicted RBP14.02□□□□□ -0.16
LINC01235-201ENST00000604724 SULT6B1Q6IMI4 303 aa14.02□□□□□ -0.16
LINC01235-201ENST00000604724 USP54Q70EL1 1684 aa14.02□□□□□ -0.17
LINC01235-201ENST00000604724 PDE3AQ14432 1141 aa14.01□□□□□ -0.17
LINC01235-201ENST00000604724 C14orf37Q86TY3 774 aa14.01□□□□□ -0.17
LINC01235-201ENST00000604724 SKAP1Q86WV1 359 aa14.01□□□□□ -0.17
LINC01235-201ENST00000604724 ABTB2Q8N961 1025 aa14.01□□□□□ -0.17
LINC01235-201ENST00000604724 SBNO1A3KN83 1393 aa14.01□□□□□ -0.17
LINC01235-201ENST00000604724 FLT4P35916 1363 aa14.01□□□□□ -0.17
LINC01235-201ENST00000604724 RLBP1P12271 317 aa14.01□□□□□ -0.17
LINC01235-201ENST00000604724 ESCO1Q5FWF5 840 aa14.01□□□□□ -0.17
LINC01235-201ENST00000604724 COG6Q9Y2V7 657 aa14.01□□□□□ -0.17
LINC01235-201ENST00000604724 KDM2BQ8NHM5 1336 aa14.01□□□□□ -0.17
LINC01235-201ENST00000604724 FAM83GA6ND36 823 aa14□□□□□ -0.17
LINC01235-201ENST00000604724 LAS1LQ9Y4W2 734 aaKnown RBP13.99□□□□□ -0.17
LINC01235-201ENST00000604724 CT47B1P0C2W7 299 aaPredicted RBP13.98□□□□□ -0.17
LINC01235-201ENST00000604724 DCTN1Q14203 1278 aa13.98□□□□□ -0.17
LINC01235-201ENST00000604724 ORAI2Q96SN7 254 aa13.98□□□□□ -0.17
LINC01235-201ENST00000604724 AMPHP49418 695 aa13.98□□□□□ -0.17
LINC01235-201ENST00000604724 SSH1Q8WYL5 1049 aa13.98□□□□□ -0.17
LINC01235-201ENST00000604724 CLUAP1Q96AJ1 413 aa13.98□□□□□ -0.17
LINC01235-201ENST00000604724 SMC4Q9NTJ3 1288 aa13.97□□□□□ -0.17
LINC01235-201ENST00000604724 PROSER2Q86WR7 435 aaPredicted RBP13.97□□□□□ -0.17
LINC01235-201ENST00000604724 STRCP1A6NGW2 1772 aa13.96□□□□□ -0.17
LINC01235-201ENST00000604724 ARHGEF10O15013 1369 aa13.96□□□□□ -0.17
LINC01235-201ENST00000604724 ZNF853P0CG23 659 aa13.96□□□□□ -0.18
LINC01235-201ENST00000604724 HOXC9P31274 260 aa13.96□□□□□ -0.18
LINC01235-201ENST00000604724 HSPA2P54652 639 aa13.96□□□□□ -0.18
LINC01235-201ENST00000604724 PSME1Q06323 249 aa13.96□□□□□ -0.18
LINC01235-201ENST00000604724 LTN1O94822 1766 aa13.96□□□□□ -0.18
LINC01235-201ENST00000604724 XPCQ01831 940 aaPredicted RBP13.95□□□□□ -0.18
LINC01235-201ENST00000604724 EYA1Q99502 592 aa13.95□□□□□ -0.18
LINC01235-201ENST00000604724 MBIPQ9NS73 344 aa13.95□□□□□ -0.18
LINC01235-201ENST00000604724 IFT57Q9NWB7 429 aa13.95□□□□□ -0.18
LINC01235-201ENST00000604724 FOXO3O43524 673 aa13.95□□□□□ -0.18
LINC01235-201ENST00000604724 CENPQQ7L2Z9 268 aaPredicted RBP13.95□□□□□ -0.18
LINC01235-201ENST00000604724 KDRP35968 1356 aa13.94□□□□□ -0.18
LINC01235-201ENST00000604724 NFAT5O94916 1531 aa13.94□□□□□ -0.18
LINC01235-201ENST00000604724 IGSF1Q8N6C5 1336 aa13.94□□□□□ -0.18
LINC01235-201ENST00000604724 CALD1Q05682 793 aaKnown RBP13.94□□□□□ -0.18
LINC01235-201ENST00000604724 LMOD3Q0VAK6 560 aa13.94□□□□□ -0.18
LINC01235-201ENST00000604724 TSPYL6Q8N831 410 aa13.94□□□□□ -0.18
LINC01235-201ENST00000604724 GNAI1P63096 354 aa13.93□□□□□ -0.18
LINC01235-201ENST00000604724 ZKSCAN2Q63HK3 967 aa13.93□□□□□ -0.18
LINC01235-201ENST00000604724 TRIM27P14373 513 aa13.93□□□□□ -0.18
LINC01235-201ENST00000604724 MCM10Q7L590 875 aa13.93□□□□□ -0.18
LINC01235-201ENST00000604724 CFAP44Q96MT7 982 aa13.93□□□□□ -0.18
LINC01235-201ENST00000604724 IGHDP01880 384 aa13.92□□□□□ -0.18
LINC01235-201ENST00000604724 NOB1Q9ULX3 412 aaKnown RBP13.92□□□□□ -0.18
LINC01235-201ENST00000604724 KIF24Q5T7B8 1368 aa13.92□□□□□ -0.18
LINC01235-201ENST00000604724 ELL2O00472 640 aaPredicted RBP13.92□□□□□ -0.18
LINC01235-201ENST00000604724 C1orf167Q5SNV9 1468 aa13.92□□□□□ -0.18
LINC01235-201ENST00000604724 TMEM94Q12767 1356 aa13.91□□□□□ -0.18
LINC01235-201ENST00000604724 TCERG1O14776 1098 aaKnown RBP13.91□□□□□ -0.18
LINC01235-201ENST00000604724 MTHFSDQ2M296 383 aaKnown RBP13.91□□□□□ -0.18
LINC01235-201ENST00000604724 DZIP1LQ8IYY4 767 aaKnown RBP13.91□□□□□ -0.18
LINC01235-201ENST00000604724 LTV1Q96GA3 475 aaPredicted RBP13.91□□□□□ -0.18
LINC01235-201ENST00000604724 VAMP4O75379 141 aa13.91□□□□□ -0.18
LINC01235-201ENST00000604724 FTSJ3Q8IY81 847 aaKnown RBP13.91□□□□□ -0.18
LINC01235-201ENST00000604724 C19orf44Q9H6X5 657 aa13.91□□□□□ -0.18
LINC01235-201ENST00000604724 TRPM3Q9HCF6 1732 aaPredicted RBP13.91□□□□□ -0.18
LINC01235-201ENST00000604724 PLEKHG5O94827 1062 aa13.9□□□□□ -0.18
LINC01235-201ENST00000604724 MVPQ14764 893 aaKnown RBP13.9□□□□□ -0.18
LINC01235-201ENST00000604724 ATF7IPQ6VMQ6 1270 aa13.9□□□□□ -0.18
LINC01235-201ENST00000604724 C8orf58Q8NAV2 365 aa13.9□□□□□ -0.18
LINC01235-201ENST00000604724 ALDH1L2Q3SY69 923 aa13.9□□□□□ -0.18
LINC01235-201ENST00000604724 PCDHB15Q9Y5E8 787 aa13.9□□□□□ -0.18
LINC01235-201ENST00000604724 RTL1A6NKG5 1358 aa13.89□□□□□ -0.19
LINC01235-201ENST00000604724 KDM4FA0A1W2PPD8 638 aa13.89□□□□□ -0.19
LINC01235-201ENST00000604724 KIF1AQ12756 1690 aa13.88□□□□□ -0.19
LINC01235-201ENST00000604724 KIF16BQ96L93 1317 aa13.88□□□□□ -0.19
LINC01235-201ENST00000604724 MST1RQ04912 1400 aa13.88□□□□□ -0.19
LINC01235-201ENST00000604724 TWISTNBQ3B726 338 aaPredicted RBP13.88□□□□□ -0.19
LINC01235-201ENST00000604724 USHBP1Q8N6Y0 703 aa13.88□□□□□ -0.19
LINC01235-201ENST00000604724 ZBTB7CA1YPR0 619 aa13.87□□□□□ -0.19
LINC01235-201ENST00000604724 KRT24Q2M2I5 525 aa13.87□□□□□ -0.19
LINC01235-201ENST00000604724 CRB1P82279 1406 aa13.87□□□□□ -0.19
LINC01235-201ENST00000604724 LMTK3Q96Q04 1460 aa13.87□□□□□ -0.19
LINC01235-201ENST00000604724 SLIT3O75094 1523 aa13.87□□□□□ -0.19
LINC01235-201ENST00000604724 LMOD2Q6P5Q4 547 aa13.87□□□□□ -0.19
LINC01235-201ENST00000604724 IP6K1Q92551 441 aa13.87□□□□□ -0.19
LINC01235-201ENST00000604724 PHRF1Q9P1Y6 1649 aaKnown RBP13.87□□□□□ -0.19
LINC01235-201ENST00000604724 MS4A1P11836 297 aa13.86□□□□□ -0.19
LINC01235-201ENST00000604724 KRT28Q7Z3Y7 464 aa13.86□□□□□ -0.19
LINC01235-201ENST00000604724 TMEM57Q8N5G2 664 aa13.86□□□□□ -0.19
LINC01235-201ENST00000604724 MRPL50Q8N5N7 158 aaKnown RBP13.86□□□□□ -0.19
LINC01235-201ENST00000604724 ZNF428Q96B54 188 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms