RNA–Protein interactions for RNA: ENST00000604543.5

ZNF559-ZNF177-210, Transcript of ZNF559-ZNF177 readthrough, humanhuman

TSL 4

Gene ZNF559-ZNF177, Length 585 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559-ZNF177-210ENST00000604543 FARP1Q9Y4F1 1045 aaPredicted RBP11.4□□□□□ -0.58
ZNF559-ZNF177-210ENST00000604543 FOXO3O43524 673 aa11.39□□□□□ -0.59
ZNF559-ZNF177-210ENST00000604543 ABTB2Q8N961 1025 aa11.39□□□□□ -0.59
ZNF559-ZNF177-210ENST00000604543 MAP2P11137 1827 aaKnown RBP11.39□□□□□ -0.59
ZNF559-ZNF177-210ENST00000604543 KIF24Q5T7B8 1368 aa11.39□□□□□ -0.59
ZNF559-ZNF177-210ENST00000604543 CDK12Q9NYV4 1490 aaPredicted RBP11.38□□□□□ -0.59
ZNF559-ZNF177-210ENST00000604543 DIAPH1O60610 1272 aaKnown RBP11.38□□□□□ -0.59
ZNF559-ZNF177-210ENST00000604543 NLRP6P59044 892 aa11.38□□□□□ -0.59
ZNF559-ZNF177-210ENST00000604543 KRT28Q7Z3Y7 464 aa11.38□□□□□ -0.59
ZNF559-ZNF177-210ENST00000604543 PIK3C2AO00443 1686 aa11.38□□□□□ -0.59
ZNF559-ZNF177-210ENST00000604543 SHPRHQ149N8 1683 aa11.38□□□□□ -0.59
ZNF559-ZNF177-210ENST00000604543 SBNO1A3KN83 1393 aa11.38□□□□□ -0.59
ZNF559-ZNF177-210ENST00000604543 PDE3BQ13370 1112 aa11.37□□□□□ -0.59
ZNF559-ZNF177-210ENST00000604543 SLAIN2Q9P270 581 aa11.37□□□□□ -0.59
ZNF559-ZNF177-210ENST00000604543 NPHP3Q7Z494 1330 aa11.36□□□□□ -0.59
ZNF559-ZNF177-210ENST00000604543 PAK3O75914 559 aaPredicted RBP11.36□□□□□ -0.59
ZNF559-ZNF177-210ENST00000604543 FBLN1P23142 703 aa11.36□□□□□ -0.59
ZNF559-ZNF177-210ENST00000604543 IL13P35225 146 aa11.36□□□□□ -0.59
ZNF559-ZNF177-210ENST00000604543 RUNDC1Q96C34 613 aa11.36□□□□□ -0.59
ZNF559-ZNF177-210ENST00000604543 PNNQ9H307 717 aaKnown RBP11.36□□□□□ -0.59
ZNF559-ZNF177-210ENST00000604543 EMILIN1Q9Y6C2 1016 aa11.36□□□□□ -0.59
ZNF559-ZNF177-210ENST00000604543 FCHSD2O94868 740 aa11.35□□□□□ -0.59
ZNF559-ZNF177-210ENST00000604543 RRS1Q15050 365 aaKnown RBP11.35□□□□□ -0.59
ZNF559-ZNF177-210ENST00000604543 KCNH5Q8NCM2 988 aa11.35□□□□□ -0.59
ZNF559-ZNF177-210ENST00000604543 TRPM3Q9HCF6 1732 aaPredicted RBP11.35□□□□□ -0.59
ZNF559-ZNF177-210ENST00000604543 MARF1Q9Y4F3 1742 aaKnown RBP11.35□□□□□ -0.59
ZNF559-ZNF177-210ENST00000604543 LTBP4Q8N2S1 1624 aa11.35□□□□□ -0.59
ZNF559-ZNF177-210ENST00000604543 PPM1GO15355 546 aaPredicted RBP11.34□□□□□ -0.59
ZNF559-ZNF177-210ENST00000604543 U2AF1L5P0DN76 240 aaPredicted RBP11.34□□□□□ -0.59
ZNF559-ZNF177-210ENST00000604543 U2AF1Q01081 240 aaKnown RBP eCLIP11.34□□□□□ -0.59
ZNF559-ZNF177-210ENST00000604543 BRINP3Q76B58 766 aa11.34□□□□□ -0.59
ZNF559-ZNF177-210ENST00000604543 USP19O94966 1318 aa11.34□□□□□ -0.59
ZNF559-ZNF177-210ENST00000604543 MAP3K19Q56UN5 1328 aa11.34□□□□□ -0.59
ZNF559-ZNF177-210ENST00000604543 NUBP1P53384 320 aa11.33□□□□□ -0.6
ZNF559-ZNF177-210ENST00000604543 PLEKHF1Q96S99 279 aa11.33□□□□□ -0.6
ZNF559-ZNF177-210ENST00000604543 CIZ1Q9ULV3 898 aaPredicted RBP11.33□□□□□ -0.6
ZNF559-ZNF177-210ENST00000604543 ZNF521Q96K83 1311 aa11.33□□□□□ -0.6
ZNF559-ZNF177-210ENST00000604543 PXDNQ92626 1479 aa11.32□□□□□ -0.6
ZNF559-ZNF177-210ENST00000604543 FLT4P35916 1363 aa11.32□□□□□ -0.6
ZNF559-ZNF177-210ENST00000604543 SLIT3O75094 1523 aa11.32□□□□□ -0.6
ZNF559-ZNF177-210ENST00000604543 SOS2Q07890 1332 aaPredicted RBP11.32□□□□□ -0.6
ZNF559-ZNF177-210ENST00000604543 RTL1A6NKG5 1358 aa11.31□□□□□ -0.6
ZNF559-ZNF177-210ENST00000604543 ALS2Q96Q42 1657 aa11.31□□□□□ -0.6
ZNF559-ZNF177-210ENST00000604543 APAF1O14727 1248 aa11.31□□□□□ -0.6
ZNF559-ZNF177-210ENST00000604543 U2SURPO15042 1029 aaKnown RBP11.31□□□□□ -0.6
ZNF559-ZNF177-210ENST00000604543 CCDC27Q2M243 656 aa11.31□□□□□ -0.6
ZNF559-ZNF177-210ENST00000604543 CCDC146Q8IYE0 955 aa11.31□□□□□ -0.6
ZNF559-ZNF177-210ENST00000604543 SPATA31A3Q5VYP0 1347 aa11.31□□□□□ -0.6
ZNF559-ZNF177-210ENST00000604543 NFAT5O94916 1531 aa11.3□□□□□ -0.6
ZNF559-ZNF177-210ENST00000604543 ARHGEF10O15013 1369 aa11.3□□□□□ -0.6
ZNF559-ZNF177-210ENST00000604543 GCP02774 474 aa11.3□□□□□ -0.6
ZNF559-ZNF177-210ENST00000604543 AMPHP49418 695 aa11.3□□□□□ -0.6
ZNF559-ZNF177-210ENST00000604543 XPCQ01831 940 aaPredicted RBP11.3□□□□□ -0.6
ZNF559-ZNF177-210ENST00000604543 EIF4A2Q14240 407 aaKnown RBP11.3□□□□□ -0.6
ZNF559-ZNF177-210ENST00000604543 HSP90AB2PQ58FF8 381 aa11.3□□□□□ -0.6
ZNF559-ZNF177-210ENST00000604543 DCAF8Q5TAQ9 597 aa11.3□□□□□ -0.6
ZNF559-ZNF177-210ENST00000604543 NUTM2GQ5VZR2 741 aa11.3□□□□□ -0.6
ZNF559-ZNF177-210ENST00000604543 TCP11L2Q8N4U5 519 aa11.3□□□□□ -0.6
ZNF559-ZNF177-210ENST00000604543 RSPH6AQ9H0K4 717 aa11.3□□□□□ -0.6
ZNF559-ZNF177-210ENST00000604543 IQSEC2Q5JU85 1478 aa11.3□□□□□ -0.6
ZNF559-ZNF177-210ENST00000604543 PEAK1Q9H792 1746 aa11.29□□□□□ -0.6
ZNF559-ZNF177-210ENST00000604543 TNS3Q68CZ2 1445 aa11.29□□□□□ -0.6
ZNF559-ZNF177-210ENST00000604543 PHRF1Q9P1Y6 1649 aaKnown RBP11.29□□□□□ -0.6
ZNF559-ZNF177-210ENST00000604543 HOXC9P31274 260 aa11.29□□□□□ -0.6
ZNF559-ZNF177-210ENST00000604543 GSE1Q14687 1217 aa11.29□□□□□ -0.6
ZNF559-ZNF177-210ENST00000604543 ARHGEF25Q86VW2 580 aa11.29□□□□□ -0.6
ZNF559-ZNF177-210ENST00000604543 IP6K1Q92551 441 aa11.29□□□□□ -0.6
ZNF559-ZNF177-210ENST00000604543 FAM212AQ96EL1 285 aa11.29□□□□□ -0.6
ZNF559-ZNF177-210ENST00000604543 DDX17Q92841 729 aaKnown RBP11.28□□□□□ -0.6
ZNF559-ZNF177-210ENST00000604543 SOX12O15370 315 aa11.27□□□□□ -0.61
ZNF559-ZNF177-210ENST00000604543 NEFMP07197 916 aa11.27□□□□□ -0.61
ZNF559-ZNF177-210ENST00000604543 TMPOP42166 694 aaKnown RBP11.27□□□□□ -0.61
ZNF559-ZNF177-210ENST00000604543 GOLGA2Q08379 1002 aa11.27□□□□□ -0.61
ZNF559-ZNF177-210ENST00000604543 WDR63Q8IWG1 891 aa11.27□□□□□ -0.61
ZNF559-ZNF177-210ENST00000604543 WWC1Q8IX03 1113 aa11.27□□□□□ -0.61
ZNF559-ZNF177-210ENST00000604543 RASEFQ8IZ41 740 aa11.27□□□□□ -0.61
ZNF559-ZNF177-210ENST00000604543 TRMT2AQ8IZ69 625 aaKnown RBP11.27□□□□□ -0.61
ZNF559-ZNF177-210ENST00000604543 MAPK8IP3Q9UPT6 1336 aa11.27□□□□□ -0.61
ZNF559-ZNF177-210ENST00000604543 MED1Q15648 1581 aaPredicted RBP11.26□□□□□ -0.61
ZNF559-ZNF177-210ENST00000604543 LMOD2Q6P5Q4 547 aa11.26□□□□□ -0.61
ZNF559-ZNF177-210ENST00000604543 SALL2Q9Y467 1007 aaPredicted RBP11.26□□□□□ -0.61
ZNF559-ZNF177-210ENST00000604543 IGSF1Q8N6C5 1336 aa11.26□□□□□ -0.61
ZNF559-ZNF177-210ENST00000604543 KDRP35968 1356 aa11.26□□□□□ -0.61
ZNF559-ZNF177-210ENST00000604543 RGPD1P0DJD0 1748 aa11.26□□□□□ -0.61
ZNF559-ZNF177-210ENST00000604543 NHSL1Q5SYE7 1610 aa11.25□□□□□ -0.61
ZNF559-ZNF177-210ENST00000604543 E9PSI1 815 aa11.25□□□□□ -0.61
ZNF559-ZNF177-210ENST00000604543 PRKAR2BP31323 418 aa11.25□□□□□ -0.61
ZNF559-ZNF177-210ENST00000604543 SLFN5Q08AF3 891 aa11.25□□□□□ -0.61
ZNF559-ZNF177-210ENST00000604543 NFE2L2Q16236 605 aa11.24□□□□□ -0.61
ZNF559-ZNF177-210ENST00000604543 SULT6B1Q6IMI4 303 aa11.24□□□□□ -0.61
ZNF559-ZNF177-210ENST00000604543 CDCA7LQ96GN5 454 aa11.24□□□□□ -0.61
ZNF559-ZNF177-210ENST00000604543 EYA1Q99502 592 aa11.24□□□□□ -0.61
ZNF559-ZNF177-210ENST00000604543 CPDO75976 1380 aa11.24□□□□□ -0.61
ZNF559-ZNF177-210ENST00000604543 ABCC6O95255 1503 aa11.24□□□□□ -0.61
ZNF559-ZNF177-210ENST00000604543 LTN1O94822 1766 aa11.23□□□□□ -0.61
ZNF559-ZNF177-210ENST00000604543 SENP3-EIF4A1A0A087X0R7 540 aa11.23□□□□□ -0.61
ZNF559-ZNF177-210ENST00000604543 TOM1O60784 492 aa11.23□□□□□ -0.61
ZNF559-ZNF177-210ENST00000604543 HMOX1P09601 288 aa11.23□□□□□ -0.61
ZNF559-ZNF177-210ENST00000604543 DUSP27Q5VZP5 1158 aa11.23□□□□□ -0.61
ZNF559-ZNF177-210ENST00000604543 TSPYL2Q9H2G4 693 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms