RNA–Protein interactions for RNA: ENST00000599564.5

GRAMD1A-211, Transcript of GRAM domain containing 1A, humanhuman

TSL 5 BASIC

Gene GRAMD1A, Length 2,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-211ENST00000599564 FOXD4L6Q3SYB3 417 aaPredicted RBP20.62■□□□□ 0.89
GRAMD1A-211ENST00000599564 FOXD4L3Q6VB84 417 aaPredicted RBP20.62■□□□□ 0.89
GRAMD1A-211ENST00000599564 PLEKHM2Q8IWE5 1019 aa20.62■□□□□ 0.89
GRAMD1A-211ENST00000599564 TSPYL6Q8N831 410 aa20.62■□□□□ 0.89
GRAMD1A-211ENST00000599564 USP26Q9BXU7 913 aa20.62■□□□□ 0.89
GRAMD1A-211ENST00000599564 OTUD7AQ8TE49 926 aaPredicted RBP20.61■□□□□ 0.89
GRAMD1A-211ENST00000599564 ZNF830Q96NB3 372 aaPredicted RBP20.61■□□□□ 0.89
GRAMD1A-211ENST00000599564 ADGRL1O94910 1474 aa20.61■□□□□ 0.89
GRAMD1A-211ENST00000599564 MYOM2P54296 1465 aa20.61■□□□□ 0.89
GRAMD1A-211ENST00000599564 NCBP3Q53F19 620 aaKnown RBP20.61■□□□□ 0.89
GRAMD1A-211ENST00000599564 ALDH1L2Q3SY69 923 aa20.6■□□□□ 0.89
GRAMD1A-211ENST00000599564 TPRNQ4KMQ1 711 aa20.6■□□□□ 0.89
GRAMD1A-211ENST00000599564 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.6■□□□□ 0.899e-7■■■□□ 15.1
GRAMD1A-211ENST00000599564 ARHGAP31Q2M1Z3 1444 aa20.59■□□□□ 0.89
GRAMD1A-211ENST00000599564 PLCH2O75038 1416 aa20.59■□□□□ 0.89
GRAMD1A-211ENST00000599564 IL16Q14005 1332 aa20.59■□□□□ 0.89
GRAMD1A-211ENST00000599564 MTERF4Q7Z6M4 381 aaKnown RBP20.59■□□□□ 0.89
GRAMD1A-211ENST00000599564 C17orf53Q8N3J3 647 aaPredicted RBP20.58■□□□□ 0.89
GRAMD1A-211ENST00000599564 QRICH2Q9H0J4 1663 aa20.58■□□□□ 0.88
GRAMD1A-211ENST00000599564 MYO3AQ8NEV4 1616 aa20.58■□□□□ 0.88
GRAMD1A-211ENST00000599564 TET3O43151 1660 aa20.57■□□□□ 0.88
GRAMD1A-211ENST00000599564 MCM5P33992 734 aa20.57■□□□□ 0.88
GRAMD1A-211ENST00000599564 CCDC94Q9BW85 323 aaPredicted RBP20.57■□□□□ 0.88
GRAMD1A-211ENST00000599564 MRPL50Q8N5N7 158 aaKnown RBP20.57■□□□□ 0.88
GRAMD1A-211ENST00000599564 MED14O60244 1454 aa20.56■□□□□ 0.88
GRAMD1A-211ENST00000599564 ST18O60284 1047 aa20.56■□□□□ 0.88
GRAMD1A-211ENST00000599564 FBLN1P23142 703 aa20.56■□□□□ 0.88
GRAMD1A-211ENST00000599564 CBX1P83916 185 aa20.56■□□□□ 0.88
GRAMD1A-211ENST00000599564 KIAA2012Q0VF49 1180 aa20.56■□□□□ 0.88
GRAMD1A-211ENST00000599564 TTC22Q5TAA0 569 aa20.56■□□□□ 0.88
GRAMD1A-211ENST00000599564 NOL8Q76FK4 1167 aaKnown RBP20.56■□□□□ 0.88
GRAMD1A-211ENST00000599564 CWC22Q9HCG8 908 aaKnown RBP20.56■□□□□ 0.88
GRAMD1A-211ENST00000599564 ABCC1P33527 1531 aa20.56■□□□□ 0.88
GRAMD1A-211ENST00000599564 MROH2AA6NES4 1674 aa20.55■□□□□ 0.88
GRAMD1A-211ENST00000599564 ANKRD36BQ8N2N9 1353 aa20.55■□□□□ 0.88
GRAMD1A-211ENST00000599564 SMARCA5O60264 1052 aaPredicted RBP20.55■□□□□ 0.88
GRAMD1A-211ENST00000599564 VAMP4O75379 141 aa20.55■□□□□ 0.88
GRAMD1A-211ENST00000599564 GDPD2Q9HCC8 539 aa20.54■□□□□ 0.88
GRAMD1A-211ENST00000599564 DIAPH1O60610 1272 aaKnown RBP20.53■□□□□ 0.88
GRAMD1A-211ENST00000599564 ZSCAN20P17040 1043 aaPredicted RBP20.53■□□□□ 0.88
GRAMD1A-211ENST00000599564 INTS3Q68E01 1043 aaKnown RBP20.53■□□□□ 0.88
GRAMD1A-211ENST00000599564 ZNF710Q8N1W2 664 aa20.53■□□□□ 0.88
GRAMD1A-211ENST00000599564 C14orf93Q9H972 538 aaKnown RBP20.53■□□□□ 0.88
GRAMD1A-211ENST00000599564 EVC2Q86UK5 1308 aa20.53■□□□□ 0.88
GRAMD1A-211ENST00000599564 SDSP20132 328 aa20.53■□□□□ 0.88
GRAMD1A-211ENST00000599564 PRKAR2BP31323 418 aa20.53■□□□□ 0.88
GRAMD1A-211ENST00000599564 MYRIPQ8NFW9 859 aa20.52■□□□□ 0.88
GRAMD1A-211ENST00000599564 KIF1BO60333 1816 aa20.52■□□□□ 0.88
GRAMD1A-211ENST00000599564 TSPY26PQ9H489 355 aa20.52■□□□□ 0.88
GRAMD1A-211ENST00000599564 PPRC1Q5VV67 1664 aaKnown RBP20.52■□□□□ 0.87
GRAMD1A-211ENST00000599564 HMOX1P09601 288 aa20.51■□□□□ 0.87
GRAMD1A-211ENST00000599564 DMTNQ08495 405 aa20.51■□□□□ 0.87
GRAMD1A-211ENST00000599564 ZFYVE16Q7Z3T8 1539 aa20.51■□□□□ 0.87
GRAMD1A-211ENST00000599564 A0A1W2PP64 1363 aa20.51■□□□□ 0.87
GRAMD1A-211ENST00000599564 SRPK2P78362 688 aaKnown RBP20.51■□□□□ 0.87
GRAMD1A-211ENST00000599564 TTC12Q9H892 705 aaPredicted RBP20.51■□□□□ 0.87
GRAMD1A-211ENST00000599564 USP32Q8NFA0 1604 aa20.5■□□□□ 0.87
GRAMD1A-211ENST00000599564 NSD2O96028 1365 aa20.5■□□□□ 0.87
GRAMD1A-211ENST00000599564 PHACTR3Q96KR7 559 aa20.49■□□□□ 0.87
GRAMD1A-211ENST00000599564 NEK4P51957 841 aa20.49■□□□□ 0.87
GRAMD1A-211ENST00000599564 CHMP4BQ9H444 224 aaKnown RBP20.49■□□□□ 0.87
GRAMD1A-211ENST00000599564 COL3A1P02461 1466 aaPredicted RBP20.49■□□□□ 0.87
GRAMD1A-211ENST00000599564 FYB1O15117 783 aa20.49■□□□□ 0.87
GRAMD1A-211ENST00000599564 ZC3H13Q5T200 1668 aaKnown RBP20.49■□□□□ 0.87
GRAMD1A-211ENST00000599564 STK26Q9P289 416 aa20.49■□□□□ 0.87
GRAMD1A-211ENST00000599564 USP25Q9UHP3 1055 aa20.49■□□□□ 0.87
GRAMD1A-211ENST00000599564 NRXN1Q9ULB1 1477 aa20.48■□□□□ 0.87
GRAMD1A-211ENST00000599564 GADD45BO75293 160 aaPredicted RBP20.48■□□□□ 0.87
GRAMD1A-211ENST00000599564 CFAP65Q6ZU64 1925 aaKnown RBP20.48■□□□□ 0.87
GRAMD1A-211ENST00000599564 ABCC4O15439 1325 aa20.48■□□□□ 0.87
GRAMD1A-211ENST00000599564 TMX3Q96JJ7 454 aa20.48■□□□□ 0.87
GRAMD1A-211ENST00000599564 DEPDC5O75140 1603 aa20.48■□□□□ 0.87
GRAMD1A-211ENST00000599564 IFT172Q9UG01 1749 aa20.47■□□□□ 0.87
GRAMD1A-211ENST00000599564 MBD3O95983 291 aa20.47■□□□□ 0.87
GRAMD1A-211ENST00000599564 ATP2B3Q16720 1220 aa20.47■□□□□ 0.87
GRAMD1A-211ENST00000599564 PPP4R3BQ5MIZ7 849 aa20.47■□□□□ 0.87
GRAMD1A-211ENST00000599564 DCTPP1Q9H773 170 aa20.47■□□□□ 0.87
GRAMD1A-211ENST00000599564 INO80Q9ULG1 1556 aaPredicted RBP20.47■□□□□ 0.87
GRAMD1A-211ENST00000599564 SPDYE4A6NLX3 237 aa20.46■□□□□ 0.87
GRAMD1A-211ENST00000599564 NOLC1Q14978 699 aaKnown RBP eCLIP20.46■□□□□ 0.87
GRAMD1A-211ENST00000599564 TULP4Q9NRJ4 1543 aa20.46■□□□□ 0.87
GRAMD1A-211ENST00000599564 TWISTNBQ3B726 338 aaPredicted RBP20.46■□□□□ 0.87
GRAMD1A-211ENST00000599564 CASC1Q6TDU7 716 aa20.46■□□□□ 0.87
GRAMD1A-211ENST00000599564 C8orf58Q8NAV2 365 aa20.46■□□□□ 0.87
GRAMD1A-211ENST00000599564 ARHGAP45Q92619 1136 aa20.46■□□□□ 0.87
GRAMD1A-211ENST00000599564 MBIPQ9NS73 344 aa20.46■□□□□ 0.87
GRAMD1A-211ENST00000599564 PTCH1Q13635 1447 aa20.46■□□□□ 0.87
GRAMD1A-211ENST00000599564 BRPF1P55201 1214 aaPredicted RBP20.45■□□□□ 0.86
GRAMD1A-211ENST00000599564 ADGRB1O14514 1584 aa20.45■□□□□ 0.86
GRAMD1A-211ENST00000599564 PLCB2Q00722 1185 aa20.45■□□□□ 0.86
GRAMD1A-211ENST00000599564 PIK3R4Q99570 1358 aa20.44■□□□□ 0.86
GRAMD1A-211ENST00000599564 IGSF3O75054 1194 aa20.44■□□□□ 0.86
GRAMD1A-211ENST00000599564 PIBF1Q8WXW3 757 aa20.43■□□□□ 0.86
GRAMD1A-211ENST00000599564 SETBP1Q9Y6X0 1596 aa20.43■□□□□ 0.86
GRAMD1A-211ENST00000599564 UTP14CQ5TAP6 766 aaKnown RBP20.43■□□□□ 0.86
GRAMD1A-211ENST00000599564 TSHZ3Q63HK5 1081 aa20.43■□□□□ 0.86
GRAMD1A-211ENST00000599564 ERCC6L2Q5T890 1561 aa20.42■□□□□ 0.86
GRAMD1A-211ENST00000599564 REC8O95072 547 aa20.42■□□□□ 0.86
GRAMD1A-211ENST00000599564 BRD1O95696 1058 aa20.42■□□□□ 0.86
GRAMD1A-211ENST00000599564 KNDC1Q76NI1 1749 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms