RNA–Protein interactions for RNA: ENST00000598478.1

LINC00343-206, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 618 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-206ENST00000598478 ZNF772Q68DY9 489 aaPredicted RBP12.37□□□□□ -0.43
LINC00343-206ENST00000598478 PPP1R18Q6NYC8 613 aa12.37□□□□□ -0.43
LINC00343-206ENST00000598478 Q6ZNB5 142 aa12.37□□□□□ -0.43
LINC00343-206ENST00000598478 NCOA2Q15596 1464 aa12.37□□□□□ -0.43
LINC00343-206ENST00000598478 RTEL1-TNFRSF6BF6WH68 1400 aa12.37□□□□□ -0.43
LINC00343-206ENST00000598478 RXRBP28702 533 aa12.36□□□□□ -0.43
LINC00343-206ENST00000598478 ERVK-7P63135 1459 aa12.35□□□□□ -0.43
LINC00343-206ENST00000598478 PROSER2Q86WR7 435 aaPredicted RBP12.35□□□□□ -0.43
LINC00343-206ENST00000598478 PRKD2Q9BZL6 878 aa12.35□□□□□ -0.43
LINC00343-206ENST00000598478 COL16A1Q07092 1604 aaPredicted RBP12.35□□□□□ -0.43
LINC00343-206ENST00000598478 EP400Q96L91 3159 aa12.35□□□□□ -0.43
LINC00343-206ENST00000598478 LRRC9Q6ZRR7 1453 aa12.34□□□□□ -0.43
LINC00343-206ENST00000598478 ARHGAP23Q9P227 1491 aa12.34□□□□□ -0.43
LINC00343-206ENST00000598478 COPS2P61201 443 aa12.34□□□□□ -0.43
LINC00343-206ENST00000598478 NKX2-3Q8TAU0 364 aa12.34□□□□□ -0.43
LINC00343-206ENST00000598478 SLAIN2Q9P270 581 aa12.34□□□□□ -0.43
LINC00343-206ENST00000598478 ABCC3O15438 1527 aa12.33□□□□□ -0.44
LINC00343-206ENST00000598478 SLIT1O75093 1534 aa12.33□□□□□ -0.44
LINC00343-206ENST00000598478 NUTM2FA1L443 756 aa12.33□□□□□ -0.44
LINC00343-206ENST00000598478 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.33□□□□□ -0.44
LINC00343-206ENST00000598478 DNAJB2P25686 324 aa12.32□□□□□ -0.44
LINC00343-206ENST00000598478 LAPTM4AQ15012 233 aa12.32□□□□□ -0.44
LINC00343-206ENST00000598478 FYCO1Q9BQS8 1478 aa12.32□□□□□ -0.44
LINC00343-206ENST00000598478 TIAM1Q13009 1591 aa12.31□□□□□ -0.44
LINC00343-206ENST00000598478 KCNA6P17658 529 aa12.31□□□□□ -0.44
LINC00343-206ENST00000598478 RBM46Q8TBY0 533 aaKnown RBP12.31□□□□□ -0.44
LINC00343-206ENST00000598478 PRR14Q9BWN1 585 aa12.31□□□□□ -0.44
LINC00343-206ENST00000598478 ADGRG1Q9Y653 693 aa12.31□□□□□ -0.44
LINC00343-206ENST00000598478 EID1Q9Y6B2 187 aa12.31□□□□□ -0.44
LINC00343-206ENST00000598478 SPATA31A6Q5VVP1 1343 aa12.31□□□□□ -0.44
LINC00343-206ENST00000598478 CDK12Q9NYV4 1490 aaPredicted RBP12.3□□□□□ -0.44
LINC00343-206ENST00000598478 SLC26A8Q96RN1 970 aa12.3□□□□□ -0.44
LINC00343-206ENST00000598478 PRDM15P57071 1507 aaPredicted RBP12.3□□□□□ -0.44
LINC00343-206ENST00000598478 SETBP1Q9Y6X0 1596 aa12.3□□□□□ -0.44
LINC00343-206ENST00000598478 CEP152O94986 1710 aa12.29□□□□□ -0.44
LINC00343-206ENST00000598478 GFRA3O60609 400 aa12.29□□□□□ -0.44
LINC00343-206ENST00000598478 V9GY48 417 aaPredicted RBP12.29□□□□□ -0.44
LINC00343-206ENST00000598478 MSH6P52701 1360 aa12.29□□□□□ -0.44
LINC00343-206ENST00000598478 CCDC141Q6ZP82 1450 aa12.28□□□□□ -0.44
LINC00343-206ENST00000598478 NUTM2BA6NNL0 878 aaPredicted RBP12.28□□□□□ -0.44
LINC00343-206ENST00000598478 NUTM2EB1AL46 878 aaPredicted RBP12.28□□□□□ -0.44
LINC00343-206ENST00000598478 SEMA3EO15041 775 aa12.28□□□□□ -0.44
LINC00343-206ENST00000598478 NUTM2AQ8IVF1 878 aaPredicted RBP12.28□□□□□ -0.44
LINC00343-206ENST00000598478 TMEM134Q9H6X4 195 aa12.28□□□□□ -0.44
LINC00343-206ENST00000598478 PCDHB3Q9Y5E6 796 aa12.28□□□□□ -0.44
LINC00343-206ENST00000598478 SHPRHQ149N8 1683 aa12.28□□□□□ -0.44
LINC00343-206ENST00000598478 RGS12O14924 1447 aa12.28□□□□□ -0.44
LINC00343-206ENST00000598478 ZPR1O75312 459 aa12.27□□□□□ -0.45
LINC00343-206ENST00000598478 GGCXP38435 758 aa12.27□□□□□ -0.45
LINC00343-206ENST00000598478 FAM161AQ3B820 660 aa12.27□□□□□ -0.45
LINC00343-206ENST00000598478 NUTM2DQ5VT03 806 aaPredicted RBP12.27□□□□□ -0.45
LINC00343-206ENST00000598478 AFF2P51816 1311 aa12.27□□□□□ -0.45
LINC00343-206ENST00000598478 FGD6Q6ZV73 1430 aa12.27□□□□□ -0.45
LINC00343-206ENST00000598478 PIK3C2BO00750 1634 aa12.26□□□□□ -0.45
LINC00343-206ENST00000598478 TET3O43151 1660 aa12.26□□□□□ -0.45
LINC00343-206ENST00000598478 RCCD1A6NED2 376 aa12.26□□□□□ -0.45
LINC00343-206ENST00000598478 FCHSD2O94868 740 aa12.26□□□□□ -0.45
LINC00343-206ENST00000598478 MTUS2Q5JR59 1369 aa12.26□□□□□ -0.45
LINC00343-206ENST00000598478 TMEM2Q9UHN6 1383 aa12.26□□□□□ -0.45
LINC00343-206ENST00000598478 MROH1Q8NDA8 1641 aa12.26□□□□□ -0.45
LINC00343-206ENST00000598478 KDM5AP29375 1690 aaKnown RBP12.24□□□□□ -0.45
LINC00343-206ENST00000598478 NKTRP30414 1462 aaKnown RBP12.24□□□□□ -0.45
LINC00343-206ENST00000598478 NWD1Q149M9 1564 aa12.24□□□□□ -0.45
LINC00343-206ENST00000598478 BLOC1S3Q6QNY0 202 aa12.24□□□□□ -0.45
LINC00343-206ENST00000598478 CAMSAP2Q08AD1 1489 aa12.23□□□□□ -0.45
LINC00343-206ENST00000598478 TMUB1Q9BVT8 246 aa12.22□□□□□ -0.45
LINC00343-206ENST00000598478 QTRT2Q9H974 415 aaKnown RBP12.22□□□□□ -0.45
LINC00343-206ENST00000598478 AHDC1Q5TGY3 1603 aaPredicted RBP12.22□□□□□ -0.45
LINC00343-206ENST00000598478 DIP2AQ14689 1571 aa12.21□□□□□ -0.46
LINC00343-206ENST00000598478 NRG2O14511 850 aaPredicted RBP12.2□□□□□ -0.46
LINC00343-206ENST00000598478 LCE2BO14633 110 aa12.2□□□□□ -0.46
LINC00343-206ENST00000598478 RBM6P78332 1123 aaKnown RBP12.2□□□□□ -0.46
LINC00343-206ENST00000598478 KMT5BQ4FZB7 885 aa12.2□□□□□ -0.46
LINC00343-206ENST00000598478 BCANQ96GW7 911 aa12.2□□□□□ -0.46
LINC00343-206ENST00000598478 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.19□□□□□ -0.46
LINC00343-206ENST00000598478 ACTN4O43707 911 aaKnown RBP12.19□□□□□ -0.46
LINC00343-206ENST00000598478 CFHP08603 1231 aa12.19□□□□□ -0.46
LINC00343-206ENST00000598478 TSPY4P0CV99 314 aa12.19□□□□□ -0.46
LINC00343-206ENST00000598478 TSPY10P0CW01 314 aa12.19□□□□□ -0.46
LINC00343-206ENST00000598478 C8orf37Q96NL8 207 aa12.19□□□□□ -0.46
LINC00343-206ENST00000598478 EFCAB6Q5THR3 1501 aa12.19□□□□□ -0.46
LINC00343-206ENST00000598478 EIF2AK4Q9P2K8 1649 aaKnown RBP12.19□□□□□ -0.46
LINC00343-206ENST00000598478 ATAD2Q6PL18 1390 aa12.18□□□□□ -0.46
LINC00343-206ENST00000598478 CHD2O14647 1828 aaKnown RBP12.18□□□□□ -0.46
LINC00343-206ENST00000598478 TRAF7Q6Q0C0 670 aa12.18□□□□□ -0.46
LINC00343-206ENST00000598478 MAST1Q9Y2H9 1570 aa12.18□□□□□ -0.46
LINC00343-206ENST00000598478 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.17□□□□□ -0.46
LINC00343-206ENST00000598478 TLL1O43897 1013 aa12.17□□□□□ -0.46
LINC00343-206ENST00000598478 RSPH4AQ5TD94 716 aa12.17□□□□□ -0.46
LINC00343-206ENST00000598478 C14orf37Q86TY3 774 aa12.17□□□□□ -0.46
LINC00343-206ENST00000598478 ARHGEF5Q12774 1597 aa12.17□□□□□ -0.46
LINC00343-206ENST00000598478 EHBP1L1Q8N3D4 1523 aa12.16□□□□□ -0.46
LINC00343-206ENST00000598478 OATP04181 439 aa12.16□□□□□ -0.46
LINC00343-206ENST00000598478 SLC10A3P09131 477 aa12.16□□□□□ -0.46
LINC00343-206ENST00000598478 IDI1Q13907 227 aa12.16□□□□□ -0.46
LINC00343-206ENST00000598478 PXYLP1Q8TE99 480 aa12.16□□□□□ -0.46
LINC00343-206ENST00000598478 ARHGAP31Q2M1Z3 1444 aa12.16□□□□□ -0.46
LINC00343-206ENST00000598478 CEP162Q5TB80 1403 aa12.16□□□□□ -0.46
LINC00343-206ENST00000598478 TESPA1A2RU30 521 aaPredicted RBP12.15□□□□□ -0.46
LINC00343-206ENST00000598478 RNF223E7ERA6 249 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms