RNA–Protein interactions for RNA: ENST00000596411.1

SPTBN4-209, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 2

Gene SPTBN4, Length 1,885 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-209ENST00000596411 PIK3R4Q99570 1358 aa29.26■■■□□ 2.27
SPTBN4-209ENST00000596411 ARHGAP23Q9P227 1491 aa29.25■■■□□ 2.27
SPTBN4-209ENST00000596411 ZNF853P0CG23 659 aa29.25■■■□□ 2.27
SPTBN4-209ENST00000596411 OVOS2A0A0J9YW53 1432 aa29.25■■■□□ 2.27
SPTBN4-209ENST00000596411 GNAI1P63096 354 aa29.25■■■□□ 2.27
SPTBN4-209ENST00000596411 PTCH1Q13635 1447 aa29.25■■■□□ 2.27
SPTBN4-209ENST00000596411 OVOS2Q6IE36 1432 aa29.25■■■□□ 2.27
SPTBN4-209ENST00000596411 DAXXQ9UER7 740 aaPredicted RBP29.25■■■□□ 2.27
SPTBN4-209ENST00000596411 DLG5Q8TDM6 1919 aa29.24■■■□□ 2.27
SPTBN4-209ENST00000596411 ARHGAP45Q92619 1136 aa29.24■■■□□ 2.27
SPTBN4-209ENST00000596411 PLEKHG3A1L390 1219 aa29.23■■■□□ 2.27
SPTBN4-209ENST00000596411 PHACTR3Q96KR7 559 aa29.23■■■□□ 2.27
SPTBN4-209ENST00000596411 ZBTB40Q9NUA8 1239 aa29.23■■■□□ 2.27
SPTBN4-209ENST00000596411 LAS1LQ9Y4W2 734 aaKnown RBP29.23■■■□□ 2.27
SPTBN4-209ENST00000596411 DIP2AQ14689 1571 aa29.22■■■□□ 2.27
SPTBN4-209ENST00000596411 FBLN1P23142 703 aa29.21■■■□□ 2.27
SPTBN4-209ENST00000596411 ITPRIPQ8IWB1 547 aa29.21■■■□□ 2.27
SPTBN4-209ENST00000596411 SMC5Q8IY18 1101 aa29.21■■■□□ 2.27
SPTBN4-209ENST00000596411 TMEM57Q8N5G2 664 aa29.2■■■□□ 2.26
SPTBN4-209ENST00000596411 CHMP4BQ9H444 224 aaKnown RBP29.2■■■□□ 2.26
SPTBN4-209ENST00000596411 USP6P35125 1406 aa29.19■■■□□ 2.26
SPTBN4-209ENST00000596411 HMOX1P09601 288 aa29.19■■■□□ 2.26
SPTBN4-209ENST00000596411 ZRANB1Q9UGI0 708 aa29.19■■■□□ 2.26
SPTBN4-209ENST00000596411 USP31Q70CQ4 1352 aa29.18■■■□□ 2.26
SPTBN4-209ENST00000596411 RGPD1P0DJD0 1748 aa29.18■■■□□ 2.26
SPTBN4-209ENST00000596411 TTC21BQ7Z4L5 1316 aa29.18■■■□□ 2.26
SPTBN4-209ENST00000596411 SSH2Q76I76 1423 aa29.17■■■□□ 2.26
SPTBN4-209ENST00000596411 RIMS1Q86UR5 1692 aaKnown RBP29.17■■■□□ 2.26
SPTBN4-209ENST00000596411 VAMP4O75379 141 aa29.17■■■□□ 2.26
SPTBN4-209ENST00000596411 NCKAP5LQ9HCH0 1330 aa29.16■■■□□ 2.26
SPTBN4-209ENST00000596411 PTPRUQ92729 1446 aa29.16■■■□□ 2.26
SPTBN4-209ENST00000596411 CFAP44Q96MT7 982 aa29.15■■■□□ 2.26
SPTBN4-209ENST00000596411 LTKP29376 864 aa29.14■■■□□ 2.26
SPTBN4-209ENST00000596411 MRPL50Q8N5N7 158 aaKnown RBP29.14■■■□□ 2.26
SPTBN4-209ENST00000596411 SEC24BO95487 1268 aa29.13■■■□□ 2.25
SPTBN4-209ENST00000596411 UPF2Q9HAU5 1272 aaKnown RBP29.13■■■□□ 2.25
SPTBN4-209ENST00000596411 ACEP12821 1306 aa29.12■■■□□ 2.25
SPTBN4-209ENST00000596411 RRS1Q15050 365 aaKnown RBP29.12■■■□□ 2.25
SPTBN4-209ENST00000596411 TBC1D32Q96NH3 1257 aa29.12■■■□□ 2.25
SPTBN4-209ENST00000596411 MBIPQ9NS73 344 aa29.11■■■□□ 2.25
SPTBN4-209ENST00000596411 PEAK1Q9H792 1746 aa29.1■■■□□ 2.25
SPTBN4-209ENST00000596411 KIF24Q5T7B8 1368 aa29.1■■■□□ 2.25
SPTBN4-209ENST00000596411 ABCC4O15439 1325 aa29.1■■■□□ 2.25
SPTBN4-209ENST00000596411 TBX22Q9Y458 520 aa29.1■■■□□ 2.25
SPTBN4-209ENST00000596411 EID1Q9Y6B2 187 aa29.1■■■□□ 2.25
SPTBN4-209ENST00000596411 TTC21AQ8NDW8 1320 aa29.09■■■□□ 2.25
SPTBN4-209ENST00000596411 BECN1Q14457 450 aa29.09■■■□□ 2.25
SPTBN4-209ENST00000596411 XRN1Q8IZH2 1706 aaKnown RBP29.08■■■□□ 2.25
SPTBN4-209ENST00000596411 SLC4A3P48751 1232 aa29.08■■■□□ 2.25
SPTBN4-209ENST00000596411 FER1L4A9Z1Z3 1794 aa29.07■■■□□ 2.24
SPTBN4-209ENST00000596411 EIF4A2Q14240 407 aaKnown RBP29.06■■■□□ 2.24
SPTBN4-209ENST00000596411 NFKBIBQ15653 356 aa29.06■■■□□ 2.24
SPTBN4-209ENST00000596411 THUMPD2Q9BTF0 503 aaKnown RBP29.06■■■□□ 2.24
SPTBN4-209ENST00000596411 FMN2Q9NZ56 1722 aa29.05■■■□□ 2.24
SPTBN4-209ENST00000596411 ZBTB7BO15156 539 aaPredicted RBP29.05■■■□□ 2.24
SPTBN4-209ENST00000596411 NUCB1Q02818 461 aa29.05■■■□□ 2.24
SPTBN4-209ENST00000596411 HAP1P54257 671 aaPredicted RBP29.04■■■□□ 2.24
SPTBN4-209ENST00000596411 TWISTNBQ3B726 338 aaPredicted RBP29.04■■■□□ 2.24
SPTBN4-209ENST00000596411 TSPYL6Q8N831 410 aa29.04■■■□□ 2.24
SPTBN4-209ENST00000596411 USP54Q70EL1 1684 aa29.03■■■□□ 2.24
SPTBN4-209ENST00000596411 ARHGEF10O15013 1369 aa29.03■■■□□ 2.24
SPTBN4-209ENST00000596411 API5Q9BZZ5 524 aaKnown RBP29.02■■■□□ 2.24
SPTBN4-209ENST00000596411 KIAA0232Q92628 1395 aa29.01■■■□□ 2.23
SPTBN4-209ENST00000596411 ANKARQ7Z5J8 1434 aa29.01■■■□□ 2.23
SPTBN4-209ENST00000596411 GCC1Q96CN9 775 aa29.01■■■□□ 2.23
SPTBN4-209ENST00000596411 BCL11AQ9H165 835 aa29■■■□□ 2.23
SPTBN4-209ENST00000596411 AMOTL2Q9Y2J4 779 aa28.98■■■□□ 2.23
SPTBN4-209ENST00000596411 C8orf58Q8NAV2 365 aa28.97■■■□□ 2.23
SPTBN4-209ENST00000596411 SULT6B1Q6IMI4 303 aa28.96■■■□□ 2.23
SPTBN4-209ENST00000596411 SBNO1A3KN83 1393 aa28.96■■■□□ 2.23
SPTBN4-209ENST00000596411 CHL1O00533 1208 aa28.95■■■□□ 2.23
SPTBN4-209ENST00000596411 KDRP35968 1356 aa28.95■■■□□ 2.22
SPTBN4-209ENST00000596411 CHD1LQ86WJ1 897 aa28.95■■■□□ 2.22
SPTBN4-209ENST00000596411 THEMISQ8N1K5 641 aaPredicted RBP28.95■■■□□ 2.22
SPTBN4-209ENST00000596411 FLT4P35916 1363 aa28.94■■■□□ 2.22
SPTBN4-209ENST00000596411 SLC26A8Q96RN1 970 aa28.94■■■□□ 2.22
SPTBN4-209ENST00000596411 PIK3C2AO00443 1686 aa28.94■■■□□ 2.22
SPTBN4-209ENST00000596411 AEBP1Q8IUX7 1158 aa28.93■■■□□ 2.22
SPTBN4-209ENST00000596411 FAM83GA6ND36 823 aa28.93■■■□□ 2.22
SPTBN4-209ENST00000596411 CEBPAP49715 358 aaPredicted RBP28.93■■■□□ 2.22
SPTBN4-209ENST00000596411 CRB1P82279 1406 aa28.92■■■□□ 2.22
SPTBN4-209ENST00000596411 BMP2KLQ5H9B9 411 aa28.9■■■□□ 2.22
SPTBN4-209ENST00000596411 RGPD8O14715 1765 aaPredicted RBP28.9■■■□□ 2.22
SPTBN4-209ENST00000596411 HSP90AB2PQ58FF8 381 aa28.89■■■□□ 2.22
SPTBN4-209ENST00000596411 INTS3Q68E01 1043 aaKnown RBP28.89■■■□□ 2.22
SPTBN4-209ENST00000596411 RGS12O14924 1447 aa28.89■■■□□ 2.22
SPTBN4-209ENST00000596411 C22orf23Q9BZE7 217 aa28.89■■■□□ 2.21
SPTBN4-209ENST00000596411 MAP3K19Q56UN5 1328 aa28.88■■■□□ 2.21
SPTBN4-209ENST00000596411 TRHP20396 242 aaPredicted RBP28.88■■■□□ 2.21
SPTBN4-209ENST00000596411 DCTN1Q14203 1278 aa28.87■■■□□ 2.21
SPTBN4-209ENST00000596411 ANTXR1Q9H6X2 564 aa28.87■■■□□ 2.21
SPTBN4-209ENST00000596411 MARF1Q9Y4F3 1742 aaKnown RBP28.87■■■□□ 2.21
SPTBN4-209ENST00000596411 LRRC37A3O60309 1634 aa28.87■■■□□ 2.21
SPTBN4-209ENST00000596411 PTPRCP08575 1304 aa28.86■■■□□ 2.21
SPTBN4-209ENST00000596411 TBC1D2Q9BYX2 928 aa28.86■■■□□ 2.21
SPTBN4-209ENST00000596411 IGSF1Q8N6C5 1336 aa28.86■■■□□ 2.21
SPTBN4-209ENST00000596411 ELL2O00472 640 aaPredicted RBP28.85■■■□□ 2.21
SPTBN4-209ENST00000596411 SIRT2Q8IXJ6 389 aa28.85■■■□□ 2.21
SPTBN4-209ENST00000596411 LNPKQ9C0E8 428 aa28.85■■■□□ 2.21
SPTBN4-209ENST00000596411 CEP170BQ9Y4F5 1589 aaPredicted RBP28.85■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms