RNA–Protein interactions for RNA: ENST00000596398.5

LINC00343-204, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 809 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-204ENST00000596398 ZNF772Q68DY9 489 aaPredicted RBP12.37□□□□□ -0.43
LINC00343-204ENST00000596398 PPP1R18Q6NYC8 613 aa12.37□□□□□ -0.43
LINC00343-204ENST00000596398 Q6ZNB5 142 aa12.37□□□□□ -0.43
LINC00343-204ENST00000596398 NCOA2Q15596 1464 aa12.37□□□□□ -0.43
LINC00343-204ENST00000596398 RTEL1-TNFRSF6BF6WH68 1400 aa12.37□□□□□ -0.43
LINC00343-204ENST00000596398 RXRBP28702 533 aa12.36□□□□□ -0.43
LINC00343-204ENST00000596398 ERVK-7P63135 1459 aa12.35□□□□□ -0.43
LINC00343-204ENST00000596398 PROSER2Q86WR7 435 aaPredicted RBP12.35□□□□□ -0.43
LINC00343-204ENST00000596398 PRKD2Q9BZL6 878 aa12.35□□□□□ -0.43
LINC00343-204ENST00000596398 COL16A1Q07092 1604 aaPredicted RBP12.35□□□□□ -0.43
LINC00343-204ENST00000596398 EP400Q96L91 3159 aa12.35□□□□□ -0.43
LINC00343-204ENST00000596398 LRRC9Q6ZRR7 1453 aa12.34□□□□□ -0.43
LINC00343-204ENST00000596398 ARHGAP23Q9P227 1491 aa12.34□□□□□ -0.43
LINC00343-204ENST00000596398 COPS2P61201 443 aa12.34□□□□□ -0.43
LINC00343-204ENST00000596398 NKX2-3Q8TAU0 364 aa12.34□□□□□ -0.43
LINC00343-204ENST00000596398 SLAIN2Q9P270 581 aa12.34□□□□□ -0.43
LINC00343-204ENST00000596398 ABCC3O15438 1527 aa12.33□□□□□ -0.44
LINC00343-204ENST00000596398 SLIT1O75093 1534 aa12.33□□□□□ -0.44
LINC00343-204ENST00000596398 NUTM2FA1L443 756 aa12.33□□□□□ -0.44
LINC00343-204ENST00000596398 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.33□□□□□ -0.44
LINC00343-204ENST00000596398 DNAJB2P25686 324 aa12.32□□□□□ -0.44
LINC00343-204ENST00000596398 LAPTM4AQ15012 233 aa12.32□□□□□ -0.44
LINC00343-204ENST00000596398 FYCO1Q9BQS8 1478 aa12.32□□□□□ -0.44
LINC00343-204ENST00000596398 TIAM1Q13009 1591 aa12.31□□□□□ -0.44
LINC00343-204ENST00000596398 KCNA6P17658 529 aa12.31□□□□□ -0.44
LINC00343-204ENST00000596398 RBM46Q8TBY0 533 aaKnown RBP12.31□□□□□ -0.44
LINC00343-204ENST00000596398 PRR14Q9BWN1 585 aa12.31□□□□□ -0.44
LINC00343-204ENST00000596398 ADGRG1Q9Y653 693 aa12.31□□□□□ -0.44
LINC00343-204ENST00000596398 EID1Q9Y6B2 187 aa12.31□□□□□ -0.44
LINC00343-204ENST00000596398 SPATA31A6Q5VVP1 1343 aa12.31□□□□□ -0.44
LINC00343-204ENST00000596398 CDK12Q9NYV4 1490 aaPredicted RBP12.3□□□□□ -0.44
LINC00343-204ENST00000596398 SLC26A8Q96RN1 970 aa12.3□□□□□ -0.44
LINC00343-204ENST00000596398 PRDM15P57071 1507 aaPredicted RBP12.3□□□□□ -0.44
LINC00343-204ENST00000596398 SETBP1Q9Y6X0 1596 aa12.3□□□□□ -0.44
LINC00343-204ENST00000596398 CEP152O94986 1710 aa12.29□□□□□ -0.44
LINC00343-204ENST00000596398 GFRA3O60609 400 aa12.29□□□□□ -0.44
LINC00343-204ENST00000596398 V9GY48 417 aaPredicted RBP12.29□□□□□ -0.44
LINC00343-204ENST00000596398 MSH6P52701 1360 aa12.29□□□□□ -0.44
LINC00343-204ENST00000596398 CCDC141Q6ZP82 1450 aa12.28□□□□□ -0.44
LINC00343-204ENST00000596398 NUTM2BA6NNL0 878 aaPredicted RBP12.28□□□□□ -0.44
LINC00343-204ENST00000596398 NUTM2EB1AL46 878 aaPredicted RBP12.28□□□□□ -0.44
LINC00343-204ENST00000596398 SEMA3EO15041 775 aa12.28□□□□□ -0.44
LINC00343-204ENST00000596398 NUTM2AQ8IVF1 878 aaPredicted RBP12.28□□□□□ -0.44
LINC00343-204ENST00000596398 TMEM134Q9H6X4 195 aa12.28□□□□□ -0.44
LINC00343-204ENST00000596398 PCDHB3Q9Y5E6 796 aa12.28□□□□□ -0.44
LINC00343-204ENST00000596398 SHPRHQ149N8 1683 aa12.28□□□□□ -0.44
LINC00343-204ENST00000596398 RGS12O14924 1447 aa12.28□□□□□ -0.44
LINC00343-204ENST00000596398 ZPR1O75312 459 aa12.27□□□□□ -0.45
LINC00343-204ENST00000596398 GGCXP38435 758 aa12.27□□□□□ -0.45
LINC00343-204ENST00000596398 FAM161AQ3B820 660 aa12.27□□□□□ -0.45
LINC00343-204ENST00000596398 NUTM2DQ5VT03 806 aaPredicted RBP12.27□□□□□ -0.45
LINC00343-204ENST00000596398 AFF2P51816 1311 aa12.27□□□□□ -0.45
LINC00343-204ENST00000596398 FGD6Q6ZV73 1430 aa12.27□□□□□ -0.45
LINC00343-204ENST00000596398 PIK3C2BO00750 1634 aa12.26□□□□□ -0.45
LINC00343-204ENST00000596398 TET3O43151 1660 aa12.26□□□□□ -0.45
LINC00343-204ENST00000596398 RCCD1A6NED2 376 aa12.26□□□□□ -0.45
LINC00343-204ENST00000596398 FCHSD2O94868 740 aa12.26□□□□□ -0.45
LINC00343-204ENST00000596398 MTUS2Q5JR59 1369 aa12.26□□□□□ -0.45
LINC00343-204ENST00000596398 TMEM2Q9UHN6 1383 aa12.26□□□□□ -0.45
LINC00343-204ENST00000596398 MROH1Q8NDA8 1641 aa12.26□□□□□ -0.45
LINC00343-204ENST00000596398 KDM5AP29375 1690 aaKnown RBP12.24□□□□□ -0.45
LINC00343-204ENST00000596398 NKTRP30414 1462 aaKnown RBP12.24□□□□□ -0.45
LINC00343-204ENST00000596398 NWD1Q149M9 1564 aa12.24□□□□□ -0.45
LINC00343-204ENST00000596398 BLOC1S3Q6QNY0 202 aa12.24□□□□□ -0.45
LINC00343-204ENST00000596398 CAMSAP2Q08AD1 1489 aa12.23□□□□□ -0.45
LINC00343-204ENST00000596398 TMUB1Q9BVT8 246 aa12.22□□□□□ -0.45
LINC00343-204ENST00000596398 QTRT2Q9H974 415 aaKnown RBP12.22□□□□□ -0.45
LINC00343-204ENST00000596398 AHDC1Q5TGY3 1603 aaPredicted RBP12.22□□□□□ -0.45
LINC00343-204ENST00000596398 DIP2AQ14689 1571 aa12.21□□□□□ -0.46
LINC00343-204ENST00000596398 NRG2O14511 850 aaPredicted RBP12.2□□□□□ -0.46
LINC00343-204ENST00000596398 LCE2BO14633 110 aa12.2□□□□□ -0.46
LINC00343-204ENST00000596398 RBM6P78332 1123 aaKnown RBP12.2□□□□□ -0.46
LINC00343-204ENST00000596398 KMT5BQ4FZB7 885 aa12.2□□□□□ -0.46
LINC00343-204ENST00000596398 BCANQ96GW7 911 aa12.2□□□□□ -0.46
LINC00343-204ENST00000596398 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.19□□□□□ -0.46
LINC00343-204ENST00000596398 ACTN4O43707 911 aaKnown RBP12.19□□□□□ -0.46
LINC00343-204ENST00000596398 CFHP08603 1231 aa12.19□□□□□ -0.46
LINC00343-204ENST00000596398 TSPY4P0CV99 314 aa12.19□□□□□ -0.46
LINC00343-204ENST00000596398 TSPY10P0CW01 314 aa12.19□□□□□ -0.46
LINC00343-204ENST00000596398 C8orf37Q96NL8 207 aa12.19□□□□□ -0.46
LINC00343-204ENST00000596398 EFCAB6Q5THR3 1501 aa12.19□□□□□ -0.46
LINC00343-204ENST00000596398 EIF2AK4Q9P2K8 1649 aaKnown RBP12.19□□□□□ -0.46
LINC00343-204ENST00000596398 ATAD2Q6PL18 1390 aa12.18□□□□□ -0.46
LINC00343-204ENST00000596398 CHD2O14647 1828 aaKnown RBP12.18□□□□□ -0.46
LINC00343-204ENST00000596398 TRAF7Q6Q0C0 670 aa12.18□□□□□ -0.46
LINC00343-204ENST00000596398 MAST1Q9Y2H9 1570 aa12.18□□□□□ -0.46
LINC00343-204ENST00000596398 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.17□□□□□ -0.46
LINC00343-204ENST00000596398 TLL1O43897 1013 aa12.17□□□□□ -0.46
LINC00343-204ENST00000596398 RSPH4AQ5TD94 716 aa12.17□□□□□ -0.46
LINC00343-204ENST00000596398 C14orf37Q86TY3 774 aa12.17□□□□□ -0.46
LINC00343-204ENST00000596398 ARHGEF5Q12774 1597 aa12.17□□□□□ -0.46
LINC00343-204ENST00000596398 EHBP1L1Q8N3D4 1523 aa12.16□□□□□ -0.46
LINC00343-204ENST00000596398 OATP04181 439 aa12.16□□□□□ -0.46
LINC00343-204ENST00000596398 SLC10A3P09131 477 aa12.16□□□□□ -0.46
LINC00343-204ENST00000596398 IDI1Q13907 227 aa12.16□□□□□ -0.46
LINC00343-204ENST00000596398 PXYLP1Q8TE99 480 aa12.16□□□□□ -0.46
LINC00343-204ENST00000596398 ARHGAP31Q2M1Z3 1444 aa12.16□□□□□ -0.46
LINC00343-204ENST00000596398 CEP162Q5TB80 1403 aa12.16□□□□□ -0.46
LINC00343-204ENST00000596398 TESPA1A2RU30 521 aaPredicted RBP12.15□□□□□ -0.46
LINC00343-204ENST00000596398 RNF223E7ERA6 249 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms