RNA–Protein interactions for RNA: ENST00000596288.5

MCM3-205, Transcript of minichromosome maintenance complex component 3, humanhuman

TSL 1 (best) BASIC

Gene MCM3, Length 3,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-205ENST00000596288 CDK12Q9NYV4 1490 aaPredicted RBP11.27□□□□□ -0.61
MCM3-205ENST00000596288 C3P01024 1663 aa11.27□□□□□ -0.61
MCM3-205ENST00000596288 ALDH1L2Q3SY69 923 aa11.27□□□□□ -0.61
MCM3-205ENST00000596288 PHACTR3Q96KR7 559 aa11.27□□□□□ -0.61
MCM3-205ENST00000596288 CPS1P31327 1500 aa11.26□□□□□ -0.61
MCM3-205ENST00000596288 AKAP12Q02952 1782 aa11.26□□□□□ -0.61
MCM3-205ENST00000596288 PTCH1Q13635 1447 aa11.26□□□□□ -0.61
MCM3-205ENST00000596288 SOX12O15370 315 aa11.26□□□□□ -0.61
MCM3-205ENST00000596288 ITPRIPQ8IWB1 547 aa11.26□□□□□ -0.61
MCM3-205ENST00000596288 EDC4Q6P2E9 1401 aaKnown RBP11.26□□□□□ -0.61
MCM3-205ENST00000596288 KIF16BQ96L93 1317 aa11.26□□□□□ -0.61
MCM3-205ENST00000596288 PRKAR2BP31323 418 aa11.26□□□□□ -0.61
MCM3-205ENST00000596288 C1orf115Q9H7X2 142 aa11.26□□□□□ -0.61
MCM3-205ENST00000596288 PODXL2Q9NZ53 605 aa11.26□□□□□ -0.61
MCM3-205ENST00000596288 FAM43AQ8N2R8 423 aa11.25□□□□□ -0.61
MCM3-205ENST00000596288 METP08581 1390 aa11.25□□□□□ -0.61
MCM3-205ENST00000596288 ZNF853P0CG23 659 aa11.25□□□□□ -0.61
MCM3-205ENST00000596288 IL13P35225 146 aa11.25□□□□□ -0.61
MCM3-205ENST00000596288 NRKQ7Z2Y5 1582 aa11.25□□□□□ -0.61
MCM3-205ENST00000596288 TECPR2O15040 1411 aa11.25□□□□□ -0.61
MCM3-205ENST00000596288 AATKQ6ZMQ8 1374 aa11.25□□□□□ -0.61
MCM3-205ENST00000596288 PPP6R1Q9UPN7 881 aa11.24□□□□□ -0.61
MCM3-205ENST00000596288 TSPOAP1O95153 1857 aa11.24□□□□□ -0.61
MCM3-205ENST00000596288 BECN1Q14457 450 aa11.24□□□□□ -0.61
MCM3-205ENST00000596288 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.24□□□□□ -0.61
MCM3-205ENST00000596288 NUCB1Q02818 461 aa11.24□□□□□ -0.61
MCM3-205ENST00000596288 EMILIN1Q9Y6C2 1016 aa11.24□□□□□ -0.61
MCM3-205ENST00000596288 VAMP4O75379 141 aa11.23□□□□□ -0.61
MCM3-205ENST00000596288 NFE2L2Q16236 605 aa11.23□□□□□ -0.61
MCM3-205ENST00000596288 TSPYL6Q8N831 410 aa11.23□□□□□ -0.61
MCM3-205ENST00000596288 ZRANB1Q9UGI0 708 aa11.23□□□□□ -0.61
MCM3-205ENST00000596288 ZBTB7BO15156 539 aaPredicted RBP11.22□□□□□ -0.61
MCM3-205ENST00000596288 FOXD4L5Q5VV16 416 aaPredicted RBP11.22□□□□□ -0.61
MCM3-205ENST00000596288 MRPL50Q8N5N7 158 aaKnown RBP11.22□□□□□ -0.61
MCM3-205ENST00000596288 FOXD4L4Q8WXT5 416 aaPredicted RBP11.22□□□□□ -0.61
MCM3-205ENST00000596288 ZNF428Q96B54 188 aa11.22□□□□□ -0.61
MCM3-205ENST00000596288 THUMPD2Q9BTF0 503 aaKnown RBP11.22□□□□□ -0.61
MCM3-205ENST00000596288 NCOA3Q9Y6Q9 1424 aa11.22□□□□□ -0.61
MCM3-205ENST00000596288 NME9Q86XW9 330 aa11.22□□□□□ -0.61
MCM3-205ENST00000596288 WASLO00401 505 aaPredicted RBP11.22□□□□□ -0.61
MCM3-205ENST00000596288 LNPKQ9C0E8 428 aa11.22□□□□□ -0.61
MCM3-205ENST00000596288 UPF2Q9HAU5 1272 aaKnown RBP11.22□□□□□ -0.61
MCM3-205ENST00000596288 TOPAZ1Q8N9V7 1692 aa11.21□□□□□ -0.61
MCM3-205ENST00000596288 HMOX1P09601 288 aa11.21□□□□□ -0.61
MCM3-205ENST00000596288 XRCC6P12956 609 aaKnown RBP eCLIP11.21□□□□□ -0.61
MCM3-205ENST00000596288 C22orf23Q9BZE7 217 aa11.21□□□□□ -0.61
MCM3-205ENST00000596288 ITSN1Q15811 1721 aa11.21□□□□□ -0.61
MCM3-205ENST00000596288 ABCC4O15439 1325 aa11.21□□□□□ -0.61
MCM3-205ENST00000596288 NCKAP5LQ9HCH0 1330 aa11.21□□□□□ -0.61
MCM3-205ENST00000596288 IPO8O15397 1037 aaKnown RBP11.21□□□□□ -0.62
MCM3-205ENST00000596288 FOXD4L6Q3SYB3 417 aaPredicted RBP11.21□□□□□ -0.62
MCM3-205ENST00000596288 FOXD4L3Q6VB84 417 aaPredicted RBP11.21□□□□□ -0.62
MCM3-205ENST00000596288 ZNF692Q9BU19 519 aaPredicted RBP11.21□□□□□ -0.62
MCM3-205ENST00000596288 NUTM2FA1L443 756 aa11.2□□□□□ -0.62
MCM3-205ENST00000596288 SIRT2Q8IXJ6 389 aa11.2□□□□□ -0.62
MCM3-205ENST00000596288 ARHGAP45Q92619 1136 aa11.2□□□□□ -0.62
MCM3-205ENST00000596288 GOLGA6L3A6NEY3 463 aa11.2□□□□□ -0.62
MCM3-205ENST00000596288 ADRA2BP18089 450 aa11.2□□□□□ -0.62
MCM3-205ENST00000596288 DDIT3P35638 169 aa11.2□□□□□ -0.62
MCM3-205ENST00000596288 FAM69CQ0P6D2 419 aa11.2□□□□□ -0.62
MCM3-205ENST00000596288 MPNDQ8N594 471 aa11.2□□□□□ -0.62
MCM3-205ENST00000596288 MBIPQ9NS73 344 aa11.2□□□□□ -0.62
MCM3-205ENST00000596288 IFT57Q9NWB7 429 aa11.2□□□□□ -0.62
MCM3-205ENST00000596288 RGPD1P0DJD0 1748 aa11.2□□□□□ -0.62
MCM3-205ENST00000596288 CYB5RLQ6IPT4 315 aa11.2□□□□□ -0.62
MCM3-205ENST00000596288 NALCNQ8IZF0 1738 aa11.19□□□□□ -0.62
MCM3-205ENST00000596288 RBM25P49756 843 aaKnown RBP11.19□□□□□ -0.62
MCM3-205ENST00000596288 PRDM10Q9NQV6 1147 aa11.19□□□□□ -0.62
MCM3-205ENST00000596288 PRR36Q9H6K5 1346 aa11.19□□□□□ -0.62
MCM3-205ENST00000596288 NCLP19338 710 aaKnown RBP11.19□□□□□ -0.62
MCM3-205ENST00000596288 STAG3Q9UJ98 1225 aa11.19□□□□□ -0.62
MCM3-205ENST00000596288 UBR1Q8IWV7 1749 aa11.18□□□□□ -0.62
MCM3-205ENST00000596288 PEAK1Q9H792 1746 aa11.18□□□□□ -0.62
MCM3-205ENST00000596288 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.18□□□□□ -0.62
MCM3-205ENST00000596288 CHD1LQ86WJ1 897 aa11.18□□□□□ -0.62
MCM3-205ENST00000596288 DTNBO60941 627 aa11.18□□□□□ -0.62
MCM3-205ENST00000596288 SIRT1Q96EB6 747 aa11.18□□□□□ -0.62
MCM3-205ENST00000596288 FAM13BQ9NYF5 915 aa11.18□□□□□ -0.62
MCM3-205ENST00000596288 RGS12O14924 1447 aa11.18□□□□□ -0.62
MCM3-205ENST00000596288 TRIM44Q96DX7 344 aaPredicted RBP11.18□□□□□ -0.62
MCM3-205ENST00000596288 KIF2CQ99661 725 aa11.18□□□□□ -0.62
MCM3-205ENST00000596288 C8orf58Q8NAV2 365 aa11.17□□□□□ -0.62
MCM3-205ENST00000596288 NUDT16Q96DE0 195 aaKnown RBP11.17□□□□□ -0.62
MCM3-205ENST00000596288 BMP2KLQ5H9B9 411 aa11.17□□□□□ -0.62
MCM3-205ENST00000596288 CFAP44Q96MT7 982 aa11.17□□□□□ -0.62
MCM3-205ENST00000596288 RBM42Q9BTD8 480 aaKnown RBP11.17□□□□□ -0.62
MCM3-205ENST00000596288 FAM83GA6ND36 823 aa11.16□□□□□ -0.62
MCM3-205ENST00000596288 GNAI1P63096 354 aa11.16□□□□□ -0.62
MCM3-205ENST00000596288 TXNDC2Q86VQ3 553 aa11.16□□□□□ -0.62
MCM3-205ENST00000596288 OVOS2A0A0J9YW53 1432 aa11.16□□□□□ -0.62
MCM3-205ENST00000596288 OVOS2Q6IE36 1432 aa11.16□□□□□ -0.62
MCM3-205ENST00000596288 ADAMTS13Q76LX8 1427 aa11.16□□□□□ -0.62
MCM3-205ENST00000596288 RRS1Q15050 365 aaKnown RBP11.16□□□□□ -0.62
MCM3-205ENST00000596288 NOL8Q76FK4 1167 aaKnown RBP11.16□□□□□ -0.62
MCM3-205ENST00000596288 CHAMP1Q96JM3 812 aa11.16□□□□□ -0.62
MCM3-205ENST00000596288 ROBO2Q9HCK4 1378 aa11.16□□□□□ -0.62
MCM3-205ENST00000596288 KIF13AQ9H1H9 1805 aa11.15□□□□□ -0.62
MCM3-205ENST00000596288 TAOK2Q9UL54 1235 aa11.15□□□□□ -0.62
MCM3-205ENST00000596288 CCDC61Q9Y6R9 512 aa11.15□□□□□ -0.62
MCM3-205ENST00000596288 CALD1Q05682 793 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms