RNA–Protein interactions for RNA: ENST00000594759.5

LIG1-207, Transcript of DNA ligase 1, humanhuman

TSL 1 (best)

Gene LIG1, Length 4,102 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-207ENST00000594759 CALRP27797 417 aaKnown RBP14.72□□□□□ -0.05
LIG1-207ENST00000594759 TOMM22Q9NS69 142 aa14.72□□□□□ -0.05
LIG1-207ENST00000594759 NOB1Q9ULX3 412 aaKnown RBP14.72□□□□□ -0.05
LIG1-207ENST00000594759 RAPGEF6Q8TEU7 1601 aa14.72□□□□□ -0.05
LIG1-207ENST00000594759 GGNBP2Q9H3C7 697 aa14.72□□□□□ -0.05
LIG1-207ENST00000594759 PAXBP1Q9Y5B6 917 aa14.72□□□□□ -0.05
LIG1-207ENST00000594759 DISP1Q96F81 1524 aa14.71□□□□□ -0.05
LIG1-207ENST00000594759 PER1O15534 1290 aaPredicted RBP14.71□□□□□ -0.05
LIG1-207ENST00000594759 EIF4G3O43432 1585 aaKnown RBP14.71□□□□□ -0.05
LIG1-207ENST00000594759 PTPN14Q15678 1187 aa14.71□□□□□ -0.05
LIG1-207ENST00000594759 CCDC27Q2M243 656 aa14.71□□□□□ -0.05
LIG1-207ENST00000594759 ATF7IPQ6VMQ6 1270 aa14.71□□□□□ -0.05
LIG1-207ENST00000594759 C10orf67Q8IYJ2 551 aa14.71□□□□□ -0.05
LIG1-207ENST00000594759 GDPD2Q9HCC8 539 aa14.71□□□□□ -0.05
LIG1-207ENST00000594759 ANO2Q9NQ90 1003 aa14.71□□□□□ -0.05
LIG1-207ENST00000594759 GCC1Q96CN9 775 aa14.71□□□□□ -0.06
LIG1-207ENST00000594759 CCDC183Q5T5S1 534 aa14.7□□□□□ -0.06
LIG1-207ENST00000594759 TMCO3Q6UWJ1 677 aa14.7□□□□□ -0.06
LIG1-207ENST00000594759 ERBINQ96RT1 1412 aa14.7□□□□□ -0.06
LIG1-207ENST00000594759 KIF14Q15058 1648 aa14.7□□□□□ -0.06
LIG1-207ENST00000594759 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.7□□□□□ -0.06
LIG1-207ENST00000594759 RNF20Q5VTR2 975 aa14.7□□□□□ -0.06
LIG1-207ENST00000594759 ZFP91Q96JP5 570 aaPredicted RBP14.7□□□□□ -0.06
LIG1-207ENST00000594759 ABCA5Q8WWZ7 1642 aa14.7□□□□□ -0.06
LIG1-207ENST00000594759 WDR33Q9C0J8 1336 aaKnown RBP14.7□□□□□ -0.06
LIG1-207ENST00000594759 CTR9Q6PD62 1173 aa14.7□□□□□ -0.06
LIG1-207ENST00000594759 RILPL2Q969X0 211 aa14.69□□□□□ -0.06
LIG1-207ENST00000594759 TMEM51Q9NW97 253 aa14.69□□□□□ -0.06
LIG1-207ENST00000594759 SMC3Q9UQE7 1217 aa14.69□□□□□ -0.06
LIG1-207ENST00000594759 VPS37CA5D8V6 355 aaPredicted RBP14.69□□□□□ -0.06
LIG1-207ENST00000594759 HSP90B2PQ58FF3 399 aa14.69□□□□□ -0.06
LIG1-207ENST00000594759 TMEM57Q8N5G2 664 aa14.69□□□□□ -0.06
LIG1-207ENST00000594759 TMX1Q9H3N1 280 aa14.69□□□□□ -0.06
LIG1-207ENST00000594759 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.68□□□□□ -0.06
LIG1-207ENST00000594759 V9GYY5 206 aaPredicted RBP14.68□□□□□ -0.06
LIG1-207ENST00000594759 KIAA0556O60303 1618 aa14.68□□□□□ -0.06
LIG1-207ENST00000594759 TBC1D9Q6ZT07 1266 aa14.68□□□□□ -0.06
LIG1-207ENST00000594759 KIF18AQ8NI77 898 aa14.68□□□□□ -0.06
LIG1-207ENST00000594759 UBXN4Q92575 508 aa14.68□□□□□ -0.06
LIG1-207ENST00000594759 EID1Q9Y6B2 187 aa14.68□□□□□ -0.06
LIG1-207ENST00000594759 WDR62O43379 1518 aa14.68□□□□□ -0.06
LIG1-207ENST00000594759 CLGNO14967 610 aa14.68□□□□□ -0.06
LIG1-207ENST00000594759 BMP2KLQ5H9B9 411 aa14.68□□□□□ -0.06
LIG1-207ENST00000594759 TXLNBQ8N3L3 684 aa14.68□□□□□ -0.06
LIG1-207ENST00000594759 NGDNQ8NEJ9 315 aaKnown RBP14.68□□□□□ -0.06
LIG1-207ENST00000594759 ZNF397Q8NF99 534 aaPredicted RBP14.68□□□□□ -0.06
LIG1-207ENST00000594759 JARID2Q92833 1246 aaPredicted RBP14.68□□□□□ -0.06
LIG1-207ENST00000594759 LMBRD1Q9NUN5 540 aa14.68□□□□□ -0.06
LIG1-207ENST00000594759 RSPH14Q9UHP6 348 aa14.68□□□□□ -0.06
LIG1-207ENST00000594759 HMMRO75330 724 aa14.67□□□□□ -0.06
LIG1-207ENST00000594759 HAP1P54257 671 aaPredicted RBP14.67□□□□□ -0.06
LIG1-207ENST00000594759 SKIDA1Q1XH10 827 aa14.67□□□□□ -0.06
LIG1-207ENST00000594759 BICD2Q8TD16 824 aa14.67□□□□□ -0.06
LIG1-207ENST00000594759 LMOD3Q0VAK6 560 aa14.67□□□□□ -0.06
LIG1-207ENST00000594759 AEBP2Q6ZN18 517 aaPredicted RBP14.67□□□□□ -0.06
LIG1-207ENST00000594759 MTHFSP49914 203 aa14.67□□□□□ -0.06
LIG1-207ENST00000594759 IRX5P78411 483 aaPredicted RBP14.67□□□□□ -0.06
LIG1-207ENST00000594759 WDR63Q8IWG1 891 aa14.67□□□□□ -0.06
LIG1-207ENST00000594759 LTV1Q96GA3 475 aaPredicted RBP14.67□□□□□ -0.06
LIG1-207ENST00000594759 SMTNL1A8MU46 457 aa14.66□□□□□ -0.06
LIG1-207ENST00000594759 DISP3Q9P2K9 1392 aa14.66□□□□□ -0.06
LIG1-207ENST00000594759 MAGI3Q5TCQ9 1506 aa14.66□□□□□ -0.06
LIG1-207ENST00000594759 CEP135Q66GS9 1140 aa14.66□□□□□ -0.06
LIG1-207ENST00000594759 HDAC5Q9UQL6 1122 aa14.66□□□□□ -0.06
LIG1-207ENST00000594759 CD109Q6YHK3 1445 aa14.65□□□□□ -0.06
LIG1-207ENST00000594759 TMEM63CQ9P1W3 806 aa14.65□□□□□ -0.06
LIG1-207ENST00000594759 FILIP1Q7Z7B0 1213 aa14.65□□□□□ -0.06
LIG1-207ENST00000594759 TEX14Q8IWB6 1497 aa14.65□□□□□ -0.06
LIG1-207ENST00000594759 CFAP43Q8NDM7 1665 aa14.65□□□□□ -0.06
LIG1-207ENST00000594759 IBTKQ9P2D0 1353 aaPredicted RBP14.64□□□□□ -0.07
LIG1-207ENST00000594759 DMRT2Q9Y5R5 561 aa14.64□□□□□ -0.07
LIG1-207ENST00000594759 ADGRF5Q8IZF2 1346 aa14.64□□□□□ -0.07
LIG1-207ENST00000594759 BRD2P25440 801 aaKnown RBP14.64□□□□□ -0.07
LIG1-207ENST00000594759 PRAM1Q96QH2 718 aa14.64□□□□□ -0.07
LIG1-207ENST00000594759 TARBP1Q13395 1621 aaKnown RBP14.64□□□□□ -0.07
LIG1-207ENST00000594759 TRIM27P14373 513 aa14.64□□□□□ -0.07
LIG1-207ENST00000594759 CCDC191Q8NCU4 936 aa14.64□□□□□ -0.07
LIG1-207ENST00000594759 SSH1Q8WYL5 1049 aa14.64□□□□□ -0.07
LIG1-207ENST00000594759 CCDC186Q7Z3E2 898 aa14.63□□□□□ -0.07
LIG1-207ENST00000594759 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.63□□□□□ -0.07
LIG1-207ENST00000594759 TRMT1Q9NXH9 659 aaKnown RBP14.63□□□□□ -0.07
LIG1-207ENST00000594759 ZMYM4Q5VZL5 1548 aa14.63□□□□□ -0.07
LIG1-207ENST00000594759 H0YHG0 523 aa14.63□□□□□ -0.07
LIG1-207ENST00000594759 ADGRL1O94910 1474 aa14.63□□□□□ -0.07
LIG1-207ENST00000594759 RDXP35241 583 aaKnown RBP14.62□□□□□ -0.07
LIG1-207ENST00000594759 ERC2O15083 957 aa14.62□□□□□ -0.07
LIG1-207ENST00000594759 FBXO31Q5XUX0 539 aaPredicted RBP14.62□□□□□ -0.07
LIG1-207ENST00000594759 GTF3C6Q969F1 213 aa14.62□□□□□ -0.07
LIG1-207ENST00000594759 LMAN1P49257 510 aa14.62□□□□□ -0.07
LIG1-207ENST00000594759 HDAC1Q13547 482 aaPredicted RBP14.62□□□□□ -0.07
LIG1-207ENST00000594759 ZBTB9Q96C00 473 aa14.62□□□□□ -0.07
LIG1-207ENST00000594759 PDLIM2Q96JY6 352 aa14.62□□□□□ -0.07
LIG1-207ENST00000594759 KDM4AO75164 1064 aa14.61□□□□□ -0.07
LIG1-207ENST00000594759 USP8P40818 1118 aa14.61□□□□□ -0.07
LIG1-207ENST00000594759 ZGPATQ8N5A5 531 aaKnown RBP14.61□□□□□ -0.07
LIG1-207ENST00000594759 TNMDQ9H2S6 317 aa14.61□□□□□ -0.07
LIG1-207ENST00000594759 KIF2AO00139 706 aaPredicted RBP14.61□□□□□ -0.07
LIG1-207ENST00000594759 BLMP54132 1417 aaPredicted RBP14.61□□□□□ -0.07
LIG1-207ENST00000594759 SLC4A10Q6U841 1118 aa14.61□□□□□ -0.07
LIG1-207ENST00000594759 CREBRFQ8IUR6 639 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms