RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 MLECQ14165 292 aa20.67■□□□□ 0.9
LIG1-206ENST00000594067 IFT57Q9NWB7 429 aa20.67■□□□□ 0.9
LIG1-206ENST00000594067 NCKAP5LQ9HCH0 1330 aa20.67■□□□□ 0.9
LIG1-206ENST00000594067 WASLO00401 505 aaPredicted RBP20.67■□□□□ 0.9
LIG1-206ENST00000594067 DLC1Q96QB1 1528 aa20.67■□□□□ 0.9
LIG1-206ENST00000594067 RRS1Q15050 365 aaKnown RBP20.66■□□□□ 0.9
LIG1-206ENST00000594067 CYB5RLQ6IPT4 315 aa20.66■□□□□ 0.9
LIG1-206ENST00000594067 UBE2Q2Q8WVN8 375 aa20.66■□□□□ 0.9
LIG1-206ENST00000594067 ARXQ96QS3 562 aa20.66■□□□□ 0.9
LIG1-206ENST00000594067 ARHGAP45Q92619 1136 aa20.66■□□□□ 0.9
LIG1-206ENST00000594067 MAP2P11137 1827 aaKnown RBP20.66■□□□□ 0.9
LIG1-206ENST00000594067 FAM69CQ0P6D2 419 aa20.65■□□□□ 0.9
LIG1-206ENST00000594067 GZF1Q9H116 711 aaPredicted RBP20.65■□□□□ 0.9
LIG1-206ENST00000594067 ZNF853P0CG23 659 aa20.65■□□□□ 0.9
LIG1-206ENST00000594067 RBM25P49756 843 aaKnown RBP20.65■□□□□ 0.9
LIG1-206ENST00000594067 TWISTNBQ3B726 338 aaPredicted RBP20.65■□□□□ 0.9
LIG1-206ENST00000594067 TXNDC2Q86VQ3 553 aa20.65■□□□□ 0.9
LIG1-206ENST00000594067 EDC4Q6P2E9 1401 aaKnown RBP20.65■□□□□ 0.9
LIG1-206ENST00000594067 FAM83GA6ND36 823 aa20.64■□□□□ 0.9
LIG1-206ENST00000594067 C8orf58Q8NAV2 365 aa20.64■□□□□ 0.9
LIG1-206ENST00000594067 GCC1Q96CN9 775 aa20.64■□□□□ 0.9
LIG1-206ENST00000594067 CPSF1Q10570 1443 aaKnown RBP20.64■□□□□ 0.89
LIG1-206ENST00000594067 PTCH1Q13635 1447 aa20.64■□□□□ 0.89
LIG1-206ENST00000594067 BMP2KLQ5H9B9 411 aa20.64■□□□□ 0.89
LIG1-206ENST00000594067 SIRT2Q8IXJ6 389 aa20.63■□□□□ 0.89
LIG1-206ENST00000594067 PIK3R4Q99570 1358 aa20.63■□□□□ 0.89
LIG1-206ENST00000594067 TRAK2O60296 914 aa20.63■□□□□ 0.89
LIG1-206ENST00000594067 COG3Q96JB2 828 aa20.63■□□□□ 0.89
LIG1-206ENST00000594067 PANK2Q9BZ23 570 aa20.63■□□□□ 0.89
LIG1-206ENST00000594067 CHMP4BQ9H444 224 aaKnown RBP20.63■□□□□ 0.89
LIG1-206ENST00000594067 DCTN1Q14203 1278 aa20.62■□□□□ 0.89
LIG1-206ENST00000594067 NUDT16Q96DE0 195 aaKnown RBP20.62■□□□□ 0.89
LIG1-206ENST00000594067 ZNF692Q9BU19 519 aaPredicted RBP20.62■□□□□ 0.89
LIG1-206ENST00000594067 ABCC4O15439 1325 aa20.62■□□□□ 0.89
LIG1-206ENST00000594067 CFAP44Q96MT7 982 aa20.61■□□□□ 0.89
LIG1-206ENST00000594067 METP08581 1390 aa20.61■□□□□ 0.89
LIG1-206ENST00000594067 RIMBP3CA6NJZ7 1639 aa20.61■□□□□ 0.89
LIG1-206ENST00000594067 RIMBP3BA6NNM3 1639 aa20.61■□□□□ 0.89
LIG1-206ENST00000594067 RIMBP3Q9UFD9 1639 aa20.61■□□□□ 0.89
LIG1-206ENST00000594067 CDK12Q9NYV4 1490 aaPredicted RBP20.6■□□□□ 0.89
LIG1-206ENST00000594067 LMOD3Q0VAK6 560 aa20.6■□□□□ 0.89
LIG1-206ENST00000594067 SNX21Q969T3 373 aa20.59■□□□□ 0.89
LIG1-206ENST00000594067 SETD1AO15047 1707 aaKnown RBP20.59■□□□□ 0.89
LIG1-206ENST00000594067 AATKQ6ZMQ8 1374 aa20.59■□□□□ 0.89
LIG1-206ENST00000594067 CPS1P31327 1500 aa20.59■□□□□ 0.89
LIG1-206ENST00000594067 PPP6R1Q9UPN7 881 aa20.59■□□□□ 0.89
LIG1-206ENST00000594067 TBC1D9Q6ZT07 1266 aa20.58■□□□□ 0.88
LIG1-206ENST00000594067 CCDC61Q9Y6R9 512 aa20.58■□□□□ 0.88
LIG1-206ENST00000594067 HSP90AB1P08238 724 aaKnown RBP20.57■□□□□ 0.88
LIG1-206ENST00000594067 DDIT3P35638 169 aa20.57■□□□□ 0.88
LIG1-206ENST00000594067 API5Q9BZZ5 524 aaKnown RBP20.57■□□□□ 0.88
LIG1-206ENST00000594067 KIF2CQ99661 725 aa20.57■□□□□ 0.88
LIG1-206ENST00000594067 SPATA31D1Q6ZQQ2 1576 aa20.57■□□□□ 0.88
LIG1-206ENST00000594067 NCOA3Q9Y6Q9 1424 aa20.56■□□□□ 0.88
LIG1-206ENST00000594067 MRE11P49959 708 aa20.55■□□□□ 0.88
LIG1-206ENST00000594067 AEBP1Q8IUX7 1158 aa20.55■□□□□ 0.88
LIG1-206ENST00000594067 CLCN1P35523 988 aa20.54■□□□□ 0.88
LIG1-206ENST00000594067 CD2BP2O95400 341 aaKnown RBP20.54■□□□□ 0.88
LIG1-206ENST00000594067 AGLP35573 1532 aa20.53■□□□□ 0.88
LIG1-206ENST00000594067 DDX11L8A8MPP1 907 aa20.53■□□□□ 0.88
LIG1-206ENST00000594067 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.53■□□□□ 0.88
LIG1-206ENST00000594067 FOXD4L1Q9NU39 408 aa20.53■□□□□ 0.88
LIG1-206ENST00000594067 KRT24Q2M2I5 525 aa20.53■□□□□ 0.88
LIG1-206ENST00000594067 RBM42Q9BTD8 480 aaKnown RBP20.53■□□□□ 0.88
LIG1-206ENST00000594067 NRXN3Q9Y4C0 1643 aa20.53■□□□□ 0.88
LIG1-206ENST00000594067 PRR36Q9H6K5 1346 aa20.52■□□□□ 0.88
LIG1-206ENST00000594067 TNPO1Q92973 898 aaKnown RBP20.52■□□□□ 0.88
LIG1-206ENST00000594067 DLG5Q8TDM6 1919 aa20.52■□□□□ 0.87
LIG1-206ENST00000594067 TSPOAP1O95153 1857 aa20.52■□□□□ 0.87
LIG1-206ENST00000594067 SULT6B1Q6IMI4 303 aa20.51■□□□□ 0.87
LIG1-206ENST00000594067 GSPT1P15170 499 aaKnown RBP20.5■□□□□ 0.87
LIG1-206ENST00000594067 EIF4A2Q14240 407 aaKnown RBP20.5■□□□□ 0.87
LIG1-206ENST00000594067 GRPEL1Q9HAV7 217 aa20.5■□□□□ 0.87
LIG1-206ENST00000594067 CDC45O75419 566 aa20.5■□□□□ 0.87
LIG1-206ENST00000594067 HSP90AA1P07900 732 aaKnown RBP20.5■□□□□ 0.87
LIG1-206ENST00000594067 REREQ9P2R6 1566 aa20.5■□□□□ 0.87
LIG1-206ENST00000594067 PLEKHM2Q8IWE5 1019 aa20.49■□□□□ 0.87
LIG1-206ENST00000594067 MCM10Q7L590 875 aa20.49■□□□□ 0.87
LIG1-206ENST00000594067 NUTM2FA1L443 756 aa20.48■□□□□ 0.87
LIG1-206ENST00000594067 C16orf71Q8IYS4 520 aaPredicted RBP20.48■□□□□ 0.87
LIG1-206ENST00000594067 DCTPP1Q9H773 170 aa20.48■□□□□ 0.87
LIG1-206ENST00000594067 ISY1Q9ULR0 285 aaKnown RBP20.48■□□□□ 0.87
LIG1-206ENST00000594067 CIZ1Q9ULV3 898 aaPredicted RBP20.48■□□□□ 0.87
LIG1-206ENST00000594067 DIP2BQ9P265 1576 aa20.47■□□□□ 0.87
LIG1-206ENST00000594067 K7ELQ4 463 aaPredicted RBP20.47■□□□□ 0.87
LIG1-206ENST00000594067 INTS3Q68E01 1043 aaKnown RBP20.47■□□□□ 0.87
LIG1-206ENST00000594067 ESF1Q9H501 851 aaKnown RBP20.47■□□□□ 0.87
LIG1-206ENST00000594067 MON2Q7Z3U7 1717 aa20.47■□□□□ 0.87
LIG1-206ENST00000594067 RAB3GAP1Q15042 981 aa20.47■□□□□ 0.87
LIG1-206ENST00000594067 KNDC1Q76NI1 1749 aa20.46■□□□□ 0.87
LIG1-206ENST00000594067 KIF24Q5T7B8 1368 aa20.46■□□□□ 0.87
LIG1-206ENST00000594067 SIRT1Q96EB6 747 aa20.46■□□□□ 0.87
LIG1-206ENST00000594067 TTC21BQ7Z4L5 1316 aa20.45■□□□□ 0.86
LIG1-206ENST00000594067 C3P01024 1663 aa20.45■□□□□ 0.86
LIG1-206ENST00000594067 SOX12O15370 315 aa20.45■□□□□ 0.86
LIG1-206ENST00000594067 CHL1O00533 1208 aa20.44■□□□□ 0.86
LIG1-206ENST00000594067 ANKRD44Q8N8A2 993 aa20.44■□□□□ 0.86
LIG1-206ENST00000594067 HSP90AB2PQ58FF8 381 aa20.44■□□□□ 0.86
LIG1-206ENST00000594067 TTC22Q5TAA0 569 aa20.44■□□□□ 0.86
LIG1-206ENST00000594067 GAS2L2Q8NHY3 880 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms