RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 ESCO1Q5FWF5 840 aa15.51■□□□□ 0.07
NPC1-214ENST00000593280 MAP3K19Q56UN5 1328 aa15.51■□□□□ 0.07
NPC1-214ENST00000593280 ABTB2Q8N961 1025 aa15.5■□□□□ 0.07
NPC1-214ENST00000593280 CRBNQ96SW2 442 aa15.5■□□□□ 0.07
NPC1-214ENST00000593280 LTN1O94822 1766 aa15.5■□□□□ 0.07
NPC1-214ENST00000593280 STRCQ7RTU9 1775 aa15.49■□□□□ 0.07
NPC1-214ENST00000593280 FANCIQ9NVI1 1328 aa15.49■□□□□ 0.07
NPC1-214ENST00000593280 C20orf194Q5TEA3 1177 aa15.49■□□□□ 0.07
NPC1-214ENST00000593280 PHACTR3Q96KR7 559 aa15.49■□□□□ 0.07
NPC1-214ENST00000593280 ARHGEF10O15013 1369 aa15.48■□□□□ 0.07
NPC1-214ENST00000593280 KIF24Q5T7B8 1368 aa15.48■□□□□ 0.07
NPC1-214ENST00000593280 BCAR3O75815 825 aa15.48■□□□□ 0.07
NPC1-214ENST00000593280 HSPA2P54652 639 aa15.48■□□□□ 0.07
NPC1-214ENST00000593280 PSME1Q06323 249 aa15.48■□□□□ 0.07
NPC1-214ENST00000593280 HSP90AB2PQ58FF8 381 aa15.48■□□□□ 0.07
NPC1-214ENST00000593280 NUTM2GQ5VZR2 741 aa15.48■□□□□ 0.07
NPC1-214ENST00000593280 TSHZ2Q9NRE2 1034 aa15.48■□□□□ 0.07
NPC1-214ENST00000593280 AMPHP49418 695 aa15.47■□□□□ 0.07
NPC1-214ENST00000593280 TRPM3Q9HCF6 1732 aaPredicted RBP15.47■□□□□ 0.07
NPC1-214ENST00000593280 DCCP43146 1447 aa15.47■□□□□ 0.07
NPC1-214ENST00000593280 NCOA3Q9Y6Q9 1424 aa15.47■□□□□ 0.07
NPC1-214ENST00000593280 CT47B1P0C2W7 299 aaPredicted RBP15.46■□□□□ 0.07
NPC1-214ENST00000593280 CALD1Q05682 793 aaKnown RBP15.46■□□□□ 0.07
NPC1-214ENST00000593280 LMOD3Q0VAK6 560 aa15.46■□□□□ 0.07
NPC1-214ENST00000593280 SULT6B1Q6IMI4 303 aa15.46■□□□□ 0.07
NPC1-214ENST00000593280 TSR2Q969E8 191 aaKnown RBP15.46■□□□□ 0.07
NPC1-214ENST00000593280 C19orf44Q9H6X5 657 aa15.46■□□□□ 0.07
NPC1-214ENST00000593280 C1orf167Q5SNV9 1468 aa15.46■□□□□ 0.07
NPC1-214ENST00000593280 NFAT5O94916 1531 aa15.46■□□□□ 0.07
NPC1-214ENST00000593280 RARSP54136 660 aaKnown RBP15.46■□□□□ 0.06
NPC1-214ENST00000593280 RTL1A6NKG5 1358 aa15.45■□□□□ 0.06
NPC1-214ENST00000593280 TMEM94Q12767 1356 aa15.45■□□□□ 0.06
NPC1-214ENST00000593280 CANXP27824 592 aaKnown RBP15.45■□□□□ 0.06
NPC1-214ENST00000593280 AEBP1Q8IUX7 1158 aa15.45■□□□□ 0.06
NPC1-214ENST00000593280 ORAI2Q96SN7 254 aa15.45■□□□□ 0.06
NPC1-214ENST00000593280 PHRF1Q9P1Y6 1649 aaKnown RBP15.44■□□□□ 0.06
NPC1-214ENST00000593280 MST1RQ04912 1400 aa15.43■□□□□ 0.06
NPC1-214ENST00000593280 ATF3P18847 181 aa15.43■□□□□ 0.06
NPC1-214ENST00000593280 EXOSC9Q06265 439 aaKnown RBP15.43■□□□□ 0.06
NPC1-214ENST00000593280 SLIT3O75094 1523 aa15.42■□□□□ 0.06
NPC1-214ENST00000593280 XIRP1Q702N8 1843 aaKnown RBP15.42■□□□□ 0.06
NPC1-214ENST00000593280 HOXC9P31274 260 aa15.42■□□□□ 0.06
NPC1-214ENST00000593280 PDE3AQ14432 1141 aa15.42■□□□□ 0.06
NPC1-214ENST00000593280 FOXO3O43524 673 aa15.41■□□□□ 0.06
NPC1-214ENST00000593280 IGSF1Q8N6C5 1336 aa15.41■□□□□ 0.06
NPC1-214ENST00000593280 KDRP35968 1356 aa15.41■□□□□ 0.06
NPC1-214ENST00000593280 ALS2Q96Q42 1657 aa15.4■□□□□ 0.06
NPC1-214ENST00000593280 KCNH5Q8NCM2 988 aa15.4■□□□□ 0.06
NPC1-214ENST00000593280 IFT57Q9NWB7 429 aa15.4■□□□□ 0.06
NPC1-214ENST00000593280 GNAI1P63096 354 aa15.39■□□□□ 0.05
NPC1-214ENST00000593280 FRAT1Q92837 279 aaPredicted RBP15.39■□□□□ 0.05
NPC1-214ENST00000593280 THUMPD2Q9BTF0 503 aaKnown RBP15.39■□□□□ 0.05
NPC1-214ENST00000593280 LAS1LQ9Y4W2 734 aaKnown RBP15.39■□□□□ 0.05
NPC1-214ENST00000593280 MSH6P52701 1360 aa15.39■□□□□ 0.05
NPC1-214ENST00000593280 XPCQ01831 940 aaPredicted RBP15.39■□□□□ 0.05
NPC1-214ENST00000593280 CERKQ8TCT0 537 aa15.39■□□□□ 0.05
NPC1-214ENST00000593280 BCL2L13Q9BXK5 485 aa15.39■□□□□ 0.05
NPC1-214ENST00000593280 KRT28Q7Z3Y7 464 aa15.38■□□□□ 0.05
NPC1-214ENST00000593280 EYA1Q99502 592 aa15.38■□□□□ 0.05
NPC1-214ENST00000593280 CADPS2Q86UW7 1296 aa15.37■□□□□ 0.05
NPC1-214ENST00000593280 SMC4Q9NTJ3 1288 aa15.37■□□□□ 0.05
NPC1-214ENST00000593280 ZNF853P0CG23 659 aa15.36■□□□□ 0.05
NPC1-214ENST00000593280 PANK1Q8TE04 598 aa15.36■□□□□ 0.05
NPC1-214ENST00000593280 IP6K1Q92551 441 aa15.36■□□□□ 0.05
NPC1-214ENST00000593280 USP19O94966 1318 aa15.36■□□□□ 0.05
NPC1-214ENST00000593280 FAM83GA6ND36 823 aa15.35■□□□□ 0.05
NPC1-214ENST00000593280 LMOD2Q6P5Q4 547 aa15.35■□□□□ 0.05
NPC1-214ENST00000593280 CFAP44Q96MT7 982 aa15.35■□□□□ 0.05
NPC1-214ENST00000593280 LTV1Q96GA3 475 aaPredicted RBP15.35■□□□□ 0.05
NPC1-214ENST00000593280 MBIPQ9NS73 344 aa15.35■□□□□ 0.05
NPC1-214ENST00000593280 DCTN1Q14203 1278 aa15.34■□□□□ 0.05
NPC1-214ENST00000593280 ALDH1L2Q3SY69 923 aa15.34■□□□□ 0.05
NPC1-214ENST00000593280 ZKSCAN2Q63HK3 967 aa15.34■□□□□ 0.05
NPC1-214ENST00000593280 SSH1Q8WYL5 1049 aa15.34■□□□□ 0.05
NPC1-214ENST00000593280 ZNF428Q96B54 188 aa15.34■□□□□ 0.05
NPC1-214ENST00000593280 LRRC37A3O60309 1634 aa15.34■□□□□ 0.05
NPC1-214ENST00000593280 ZBTB7CA1YPR0 619 aa15.33■□□□□ 0.04
NPC1-214ENST00000593280 MS4A1P11836 297 aa15.33■□□□□ 0.04
NPC1-214ENST00000593280 GAS2L2Q8NHY3 880 aa15.33■□□□□ 0.04
NPC1-214ENST00000593280 COG6Q9Y2V7 657 aa15.33■□□□□ 0.04
NPC1-214ENST00000593280 RGPD2P0DJD1 1756 aa15.33■□□□□ 0.04
NPC1-214ENST00000593280 KIF16BQ96L93 1317 aa15.33■□□□□ 0.04
NPC1-214ENST00000593280 GCP02774 474 aa15.32■□□□□ 0.04
NPC1-214ENST00000593280 MTHFSDQ2M296 383 aaKnown RBP15.32■□□□□ 0.04
NPC1-214ENST00000593280 MED1Q15648 1581 aaPredicted RBP15.32■□□□□ 0.04
NPC1-214ENST00000593280 NPHP3Q7Z494 1330 aa15.32■□□□□ 0.04
NPC1-214ENST00000593280 KDM2BQ8NHM5 1336 aa15.32■□□□□ 0.04
NPC1-214ENST00000593280 CENPQQ7L2Z9 268 aaPredicted RBP15.32■□□□□ 0.04
NPC1-214ENST00000593280 MCM10Q7L590 875 aa15.32■□□□□ 0.04
NPC1-214ENST00000593280 RLBP1P12271 317 aa15.31■□□□□ 0.04
NPC1-214ENST00000593280 AAMPQ13685 434 aa15.31■□□□□ 0.04
NPC1-214ENST00000593280 ARHGEF25Q86VW2 580 aa15.31■□□□□ 0.04
NPC1-214ENST00000593280 FTSJ3Q8IY81 847 aaKnown RBP15.31■□□□□ 0.04
NPC1-214ENST00000593280 RTF1Q92541 710 aaKnown RBP15.31■□□□□ 0.04
NPC1-214ENST00000593280 TNS3Q68CZ2 1445 aa15.3■□□□□ 0.04
NPC1-214ENST00000593280 CAMTA1Q9Y6Y1 1673 aa15.3■□□□□ 0.04
NPC1-214ENST00000593280 PXDNQ92626 1479 aa15.3■□□□□ 0.04
NPC1-214ENST00000593280 DZIP1LQ8IYY4 767 aaKnown RBP15.3■□□□□ 0.04
NPC1-214ENST00000593280 CLUAP1Q96AJ1 413 aa15.3■□□□□ 0.04
NPC1-214ENST00000593280 TNNQ9UQP3 1299 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms