RNA–Protein interactions for RNA: ENST00000593160.2

CACNA1A-212, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,651 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-212ENST00000593160 MED1Q15648 1581 aaPredicted RBP16.77■□□□□ 0.28
CACNA1A-212ENST00000593160 SLFN5Q08AF3 891 aa16.77■□□□□ 0.28
CACNA1A-212ENST00000593160 TRMT2AQ8IZ69 625 aaKnown RBP16.77■□□□□ 0.28
CACNA1A-212ENST00000593160 MAPK8IP3Q9UPT6 1336 aa16.77■□□□□ 0.27
CACNA1A-212ENST00000593160 NEFLP07196 543 aa16.76■□□□□ 0.27
CACNA1A-212ENST00000593160 PRKAR2BP31323 418 aa16.76■□□□□ 0.27
CACNA1A-212ENST00000593160 PNNQ9H307 717 aaKnown RBP16.76■□□□□ 0.27
CACNA1A-212ENST00000593160 SPINK5Q9NQ38 1064 aaPredicted RBP16.76■□□□□ 0.27
CACNA1A-212ENST00000593160 FKBP8Q14318 412 aa16.75■□□□□ 0.27
CACNA1A-212ENST00000593160 LTBP4Q8N2S1 1624 aa16.75■□□□□ 0.27
CACNA1A-212ENST00000593160 NPHP3Q7Z494 1330 aa16.75■□□□□ 0.27
CACNA1A-212ENST00000593160 ARHGEF10O15013 1369 aa16.75■□□□□ 0.27
CACNA1A-212ENST00000593160 DLG5Q8TDM6 1919 aa16.75■□□□□ 0.27
CACNA1A-212ENST00000593160 TNS3Q68CZ2 1445 aa16.75■□□□□ 0.27
CACNA1A-212ENST00000593160 NHSL1Q5SYE7 1610 aa16.75■□□□□ 0.27
CACNA1A-212ENST00000593160 HMOX1P09601 288 aa16.75■□□□□ 0.27
CACNA1A-212ENST00000593160 TMPOP42166 694 aaKnown RBP16.75■□□□□ 0.27
CACNA1A-212ENST00000593160 HOXC9P31274 260 aa16.74■□□□□ 0.27
CACNA1A-212ENST00000593160 NEUROD2Q15784 382 aa16.74■□□□□ 0.27
CACNA1A-212ENST00000593160 BRINP3Q76B58 766 aa16.74■□□□□ 0.27
CACNA1A-212ENST00000593160 E9PSI1 815 aa16.73■□□□□ 0.27
CACNA1A-212ENST00000593160 AMPHP49418 695 aa16.73■□□□□ 0.27
CACNA1A-212ENST00000593160 KCNH5Q8NCM2 988 aa16.73■□□□□ 0.27
CACNA1A-212ENST00000593160 DDX17Q92841 729 aaKnown RBP16.73■□□□□ 0.27
CACNA1A-212ENST00000593160 WDR63Q8IWG1 891 aa16.72■□□□□ 0.27
CACNA1A-212ENST00000593160 KDRP35968 1356 aa16.72■□□□□ 0.27
CACNA1A-212ENST00000593160 RCAN3Q9UKA8 241 aa16.72■□□□□ 0.27
CACNA1A-212ENST00000593160 TRIM35Q9UPQ4 493 aa16.72■□□□□ 0.27
CACNA1A-212ENST00000593160 AEBP1Q8IUX7 1158 aa16.71■□□□□ 0.27
CACNA1A-212ENST00000593160 PHACTR3Q96KR7 559 aa16.71■□□□□ 0.27
CACNA1A-212ENST00000593160 IGSF1Q8N6C5 1336 aa16.71■□□□□ 0.27
CACNA1A-212ENST00000593160 SLAIN2Q9P270 581 aa16.7■□□□□ 0.26
CACNA1A-212ENST00000593160 CAMTA1Q9Y6Y1 1673 aa16.7■□□□□ 0.26
CACNA1A-212ENST00000593160 GCP02774 474 aa16.69■□□□□ 0.26
CACNA1A-212ENST00000593160 ABCA3Q99758 1704 aa16.69■□□□□ 0.26
CACNA1A-212ENST00000593160 SPATA31A3Q5VYP0 1347 aa16.69■□□□□ 0.26
CACNA1A-212ENST00000593160 IRX6P78412 446 aaPredicted RBP16.69■□□□□ 0.26
CACNA1A-212ENST00000593160 NFE2L2Q16236 605 aa16.69■□□□□ 0.26
CACNA1A-212ENST00000593160 SULT6B1Q6IMI4 303 aa16.69■□□□□ 0.26
CACNA1A-212ENST00000593160 IP6K1Q92551 441 aa16.69■□□□□ 0.26
CACNA1A-212ENST00000593160 RGPD2P0DJD1 1756 aa16.68■□□□□ 0.26
CACNA1A-212ENST00000593160 NEFMP07197 916 aa16.68■□□□□ 0.26
CACNA1A-212ENST00000593160 RIPK4P57078 832 aa16.68■□□□□ 0.26
CACNA1A-212ENST00000593160 COL18A1P39060 1754 aa16.67■□□□□ 0.26
CACNA1A-212ENST00000593160 RGPD5Q99666 1765 aa16.67■□□□□ 0.26
CACNA1A-212ENST00000593160 LMOD2Q6P5Q4 547 aa16.67■□□□□ 0.26
CACNA1A-212ENST00000593160 ARHGEF25Q86VW2 580 aa16.67■□□□□ 0.26
CACNA1A-212ENST00000593160 EYA1Q99502 592 aa16.67■□□□□ 0.26
CACNA1A-212ENST00000593160 SOS2Q07890 1332 aaPredicted RBP16.66■□□□□ 0.26
CACNA1A-212ENST00000593160 RRP1P56182 461 aaKnown RBP16.66■□□□□ 0.26
CACNA1A-212ENST00000593160 ABCC6O95255 1503 aa16.66■□□□□ 0.26
CACNA1A-212ENST00000593160 IL16Q14005 1332 aa16.66■□□□□ 0.26
CACNA1A-212ENST00000593160 LMO7Q8WWI1 1683 aa16.65■□□□□ 0.26
CACNA1A-212ENST00000593160 NCAPD2Q15021 1401 aa16.65■□□□□ 0.26
CACNA1A-212ENST00000593160 ROBO1Q9Y6N7 1651 aa16.64■□□□□ 0.25
CACNA1A-212ENST00000593160 ERICH6BQ5W0A0 696 aa16.64■□□□□ 0.25
CACNA1A-212ENST00000593160 MYH16Q9H6N6 1097 aa16.62■□□□□ 0.25
CACNA1A-212ENST00000593160 AHDC1Q5TGY3 1603 aaPredicted RBP16.62■□□□□ 0.25
CACNA1A-212ENST00000593160 FANCIQ9NVI1 1328 aa16.61■□□□□ 0.25
CACNA1A-212ENST00000593160 FAM208AQ9UK61 1670 aaKnown RBP16.61■□□□□ 0.25
CACNA1A-212ENST00000593160 LRRC37A3O60309 1634 aa16.61■□□□□ 0.25
CACNA1A-212ENST00000593160 LTV1Q96GA3 475 aaPredicted RBP16.61■□□□□ 0.25
CACNA1A-212ENST00000593160 PLEKHG5O94827 1062 aa16.6■□□□□ 0.25
CACNA1A-212ENST00000593160 LMOD3Q0VAK6 560 aa16.6■□□□□ 0.25
CACNA1A-212ENST00000593160 CPDO75976 1380 aa16.59■□□□□ 0.25
CACNA1A-212ENST00000593160 ZBTB7CA1YPR0 619 aa16.59■□□□□ 0.25
CACNA1A-212ENST00000593160 NBPF6Q5VWK0 638 aa16.58■□□□□ 0.24
CACNA1A-212ENST00000593160 CABLES1Q8TDN4 633 aa16.58■□□□□ 0.24
CACNA1A-212ENST00000593160 TSR2Q969E8 191 aaKnown RBP16.58■□□□□ 0.24
CACNA1A-212ENST00000593160 NBPF4Q96M43 638 aa16.58■□□□□ 0.24
CACNA1A-212ENST00000593160 AXIN2Q9Y2T1 843 aa16.58■□□□□ 0.24
CACNA1A-212ENST00000593160 ZC3H6P61129 1189 aaKnown RBP16.57■□□□□ 0.24
CACNA1A-212ENST00000593160 MTHFSDQ2M296 383 aaKnown RBP16.57■□□□□ 0.24
CACNA1A-212ENST00000593160 THUMPD2Q9BTF0 503 aaKnown RBP16.57■□□□□ 0.24
CACNA1A-212ENST00000593160 ERBB3P21860 1342 aa16.57■□□□□ 0.24
CACNA1A-212ENST00000593160 CALD1Q05682 793 aaKnown RBP16.56■□□□□ 0.24
CACNA1A-212ENST00000593160 USHBP1Q8N6Y0 703 aa16.56■□□□□ 0.24
CACNA1A-212ENST00000593160 ANKRD24Q8TF21 1146 aa16.56■□□□□ 0.24
CACNA1A-212ENST00000593160 FAM83GA6ND36 823 aa16.56■□□□□ 0.24
CACNA1A-212ENST00000593160 ZNF853P0CG23 659 aa16.56■□□□□ 0.24
CACNA1A-212ENST00000593160 COL22A1Q8NFW1 1626 aaPredicted RBP16.56■□□□□ 0.24
CACNA1A-212ENST00000593160 KIAA0232Q92628 1395 aa16.55■□□□□ 0.24
CACNA1A-212ENST00000593160 LRRC59Q96AG4 307 aaKnown RBP16.55■□□□□ 0.24
CACNA1A-212ENST00000593160 IFT57Q9NWB7 429 aa16.55■□□□□ 0.24
CACNA1A-212ENST00000593160 PLIN1O60240 522 aa16.54■□□□□ 0.24
CACNA1A-212ENST00000593160 GAS2L2Q8NHY3 880 aa16.54■□□□□ 0.24
CACNA1A-212ENST00000593160 CRB1P82279 1406 aa16.54■□□□□ 0.24
CACNA1A-212ENST00000593160 CT47B1P0C2W7 299 aaPredicted RBP16.53■□□□□ 0.24
CACNA1A-212ENST00000593160 DCTN1Q14203 1278 aa16.53■□□□□ 0.24
CACNA1A-212ENST00000593160 BCAR3O75815 825 aa16.53■□□□□ 0.24
CACNA1A-212ENST00000593160 RARSP54136 660 aaKnown RBP16.53■□□□□ 0.24
CACNA1A-212ENST00000593160 GNAI1P63096 354 aa16.53■□□□□ 0.24
CACNA1A-212ENST00000593160 EXOSC9Q06265 439 aaKnown RBP16.53■□□□□ 0.24
CACNA1A-212ENST00000593160 PPP4R2Q9NY27 417 aa16.53■□□□□ 0.24
CACNA1A-212ENST00000593160 COL16A1Q07092 1604 aaPredicted RBP16.52■□□□□ 0.24
CACNA1A-212ENST00000593160 CFAP44Q96MT7 982 aa16.51■□□□□ 0.23
CACNA1A-212ENST00000593160 MAP3K5Q99683 1374 aa16.51■□□□□ 0.23
CACNA1A-212ENST00000593160 VIRMAQ69YN4 1812 aaKnown RBP16.51■□□□□ 0.23
CACNA1A-212ENST00000593160 MCM10Q7L590 875 aa16.5■□□□□ 0.23
CACNA1A-212ENST00000593160 MBIPQ9NS73 344 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms