RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 PDE3AQ14432 1141 aa18.36■□□□□ 0.53
RANBP3-229ENST00000592771 PEAK1Q9H792 1746 aa18.36■□□□□ 0.53
RANBP3-229ENST00000592771 RIPK4P57078 832 aa18.35■□□□□ 0.53
RANBP3-229ENST00000592771 PIK3C2AO00443 1686 aa18.35■□□□□ 0.53
RANBP3-229ENST00000592771 NPHP4O75161 1426 aaPredicted RBP18.35■□□□□ 0.53
RANBP3-229ENST00000592771 FAM161AQ3B820 660 aa18.35■□□□□ 0.53
RANBP3-229ENST00000592771 RGPD1P0DJD0 1748 aa18.33■□□□□ 0.53
RANBP3-229ENST00000592771 PMFBP1Q8TBY8 1022 aa18.33■□□□□ 0.53
RANBP3-229ENST00000592771 AAMPQ13685 434 aa18.33■□□□□ 0.52
RANBP3-229ENST00000592771 NFE2L2Q16236 605 aa18.33■□□□□ 0.52
RANBP3-229ENST00000592771 NGDNQ8NEJ9 315 aaKnown RBP18.32■□□□□ 0.52
RANBP3-229ENST00000592771 MARF1Q9Y4F3 1742 aaKnown RBP18.32■□□□□ 0.52
RANBP3-229ENST00000592771 NWD1Q149M9 1564 aa18.32■□□□□ 0.52
RANBP3-229ENST00000592771 NEFMP07197 916 aa18.31■□□□□ 0.52
RANBP3-229ENST00000592771 HMOX1P09601 288 aa18.31■□□□□ 0.52
RANBP3-229ENST00000592771 PHACTR3Q96KR7 559 aa18.31■□□□□ 0.52
RANBP3-229ENST00000592771 ADGRL3Q9HAR2 1447 aa18.31■□□□□ 0.52
RANBP3-229ENST00000592771 DLG5Q8TDM6 1919 aa18.3■□□□□ 0.52
RANBP3-229ENST00000592771 EIF4A2Q14240 407 aaKnown RBP18.29■□□□□ 0.52
RANBP3-229ENST00000592771 TSR2Q969E8 191 aaKnown RBP18.29■□□□□ 0.52
RANBP3-229ENST00000592771 LMTK3Q96Q04 1460 aa18.29■□□□□ 0.52
RANBP3-229ENST00000592771 EXOSC9Q06265 439 aaKnown RBP18.27■□□□□ 0.51
RANBP3-229ENST00000592771 SBNO1A3KN83 1393 aa18.27■□□□□ 0.51
RANBP3-229ENST00000592771 C8orf34Q49A92 452 aa18.26■□□□□ 0.51
RANBP3-229ENST00000592771 MAP3K19Q56UN5 1328 aa18.26■□□□□ 0.51
RANBP3-229ENST00000592771 FLT4P35916 1363 aa18.25■□□□□ 0.51
RANBP3-229ENST00000592771 CANXP27824 592 aaKnown RBP18.25■□□□□ 0.51
RANBP3-229ENST00000592771 CALD1Q05682 793 aaKnown RBP18.25■□□□□ 0.51
RANBP3-229ENST00000592771 ARHGEF10O15013 1369 aa18.24■□□□□ 0.51
RANBP3-229ENST00000592771 HSP90AB2PQ58FF8 381 aa18.24■□□□□ 0.51
RANBP3-229ENST00000592771 KIF24Q5T7B8 1368 aa18.24■□□□□ 0.51
RANBP3-229ENST00000592771 PANK1Q8TE04 598 aa18.24■□□□□ 0.51
RANBP3-229ENST00000592771 LMOD3Q0VAK6 560 aa18.23■□□□□ 0.51
RANBP3-229ENST00000592771 PHF8Q9UPP1 1060 aa18.23■□□□□ 0.51
RANBP3-229ENST00000592771 ZNF853P0CG23 659 aa18.23■□□□□ 0.51
RANBP3-229ENST00000592771 FRAT1Q92837 279 aaPredicted RBP18.23■□□□□ 0.51
RANBP3-229ENST00000592771 DAXXQ9UER7 740 aaPredicted RBP18.23■□□□□ 0.51
RANBP3-229ENST00000592771 VIRMAQ69YN4 1812 aaKnown RBP18.23■□□□□ 0.51
RANBP3-229ENST00000592771 AEBP2Q6ZN18 517 aaPredicted RBP18.22■□□□□ 0.51
RANBP3-229ENST00000592771 IFT57Q9NWB7 429 aa18.22■□□□□ 0.51
RANBP3-229ENST00000592771 RLBP1P12271 317 aa18.21■□□□□ 0.51
RANBP3-229ENST00000592771 AEBP1Q8IUX7 1158 aa18.21■□□□□ 0.51
RANBP3-229ENST00000592771 BCL2L13Q9BXK5 485 aa18.21■□□□□ 0.51
RANBP3-229ENST00000592771 COG6Q9Y2V7 657 aa18.21■□□□□ 0.51
RANBP3-229ENST00000592771 NLRP6P59044 892 aa18.21■□□□□ 0.51
RANBP3-229ENST00000592771 SULT6B1Q6IMI4 303 aa18.21■□□□□ 0.51
RANBP3-229ENST00000592771 SSH1Q8WYL5 1049 aa18.2■□□□□ 0.5
RANBP3-229ENST00000592771 CLUAP1Q96AJ1 413 aa18.2■□□□□ 0.5
RANBP3-229ENST00000592771 ZNF428Q96B54 188 aa18.2■□□□□ 0.5
RANBP3-229ENST00000592771 LAS1LQ9Y4W2 734 aaKnown RBP18.2■□□□□ 0.5
RANBP3-229ENST00000592771 KDRP35968 1356 aa18.2■□□□□ 0.5
RANBP3-229ENST00000592771 GNAI1P63096 354 aa18.19■□□□□ 0.5
RANBP3-229ENST00000592771 ZKSCAN2Q63HK3 967 aa18.19■□□□□ 0.5
RANBP3-229ENST00000592771 SKAP1Q86WV1 359 aa18.19■□□□□ 0.5
RANBP3-229ENST00000592771 ALDH1L2Q3SY69 923 aa18.19■□□□□ 0.5
RANBP3-229ENST00000592771 SMC4Q9NTJ3 1288 aa18.19■□□□□ 0.5
RANBP3-229ENST00000592771 TNNQ9UQP3 1299 aa18.19■□□□□ 0.5
RANBP3-229ENST00000592771 BRPF1P55201 1214 aaPredicted RBP18.18■□□□□ 0.5
RANBP3-229ENST00000592771 THUMPD2Q9BTF0 503 aaKnown RBP18.18■□□□□ 0.5
RANBP3-229ENST00000592771 RBM33Q96EV2 1170 aaKnown RBP18.17■□□□□ 0.5
RANBP3-229ENST00000592771 IGSF1Q8N6C5 1336 aa18.17■□□□□ 0.5
RANBP3-229ENST00000592771 SOX12O15370 315 aa18.17■□□□□ 0.5
RANBP3-229ENST00000592771 CFAP44Q96MT7 982 aa18.17■□□□□ 0.5
RANBP3-229ENST00000592771 ABTB2Q8N961 1025 aa18.16■□□□□ 0.5
RANBP3-229ENST00000592771 RTL1A6NKG5 1358 aa18.16■□□□□ 0.5
RANBP3-229ENST00000592771 NFAT5O94916 1531 aa18.16■□□□□ 0.5
RANBP3-229ENST00000592771 AMPHP49418 695 aa18.15■□□□□ 0.5
RANBP3-229ENST00000592771 KIF16BQ96L93 1317 aa18.15■□□□□ 0.5
RANBP3-229ENST00000592771 RGS3P49796 1198 aa18.15■□□□□ 0.5
RANBP3-229ENST00000592771 MVPQ14764 893 aaKnown RBP18.15■□□□□ 0.5
RANBP3-229ENST00000592771 DZIP1LQ8IYY4 767 aaKnown RBP18.15■□□□□ 0.5
RANBP3-229ENST00000592771 MBIPQ9NS73 344 aa18.15■□□□□ 0.5
RANBP3-229ENST00000592771 PHRF1Q9P1Y6 1649 aaKnown RBP18.14■□□□□ 0.49
RANBP3-229ENST00000592771 HOXC9P31274 260 aa18.14■□□□□ 0.49
RANBP3-229ENST00000592771 LTN1O94822 1766 aa18.14■□□□□ 0.49
RANBP3-229ENST00000592771 VAMP4O75379 141 aa18.13■□□□□ 0.49
RANBP3-229ENST00000592771 IGHDP01880 384 aa18.13■□□□□ 0.49
RANBP3-229ENST00000592771 TRIM27P14373 513 aa18.13■□□□□ 0.49
RANBP3-229ENST00000592771 ATF7IPQ6VMQ6 1270 aa18.13■□□□□ 0.49
RANBP3-229ENST00000592771 FAM83GA6ND36 823 aa18.13■□□□□ 0.49
RANBP3-229ENST00000592771 ESCO1Q5FWF5 840 aa18.13■□□□□ 0.49
RANBP3-229ENST00000592771 EYA1Q99502 592 aa18.13■□□□□ 0.49
RANBP3-229ENST00000592771 KIF1AQ12756 1690 aa18.12■□□□□ 0.49
RANBP3-229ENST00000592771 STRCQ7RTU9 1775 aa18.12■□□□□ 0.49
RANBP3-229ENST00000592771 NUTM2GQ5VZR2 741 aa18.11■□□□□ 0.49
RANBP3-229ENST00000592771 NOB1Q9ULX3 412 aaKnown RBP18.11■□□□□ 0.49
RANBP3-229ENST00000592771 TRPM3Q9HCF6 1732 aaPredicted RBP18.11■□□□□ 0.49
RANBP3-229ENST00000592771 IPO8O15397 1037 aaKnown RBP18.11■□□□□ 0.49
RANBP3-229ENST00000592771 NFKBIBQ15653 356 aa18.11■□□□□ 0.49
RANBP3-229ENST00000592771 FTSJ3Q8IY81 847 aaKnown RBP18.11■□□□□ 0.49
RANBP3-229ENST00000592771 DCTN1Q14203 1278 aa18.1■□□□□ 0.49
RANBP3-229ENST00000592771 C14orf37Q86TY3 774 aa18.1■□□□□ 0.49
RANBP3-229ENST00000592771 PROSER2Q86WR7 435 aaPredicted RBP18.1■□□□□ 0.49
RANBP3-229ENST00000592771 STRCP1A6NGW2 1772 aa18.1■□□□□ 0.49
RANBP3-229ENST00000592771 PSME1Q06323 249 aa18.1■□□□□ 0.49
RANBP3-229ENST00000592771 TSPYL6Q8N831 410 aa18.1■□□□□ 0.49
RANBP3-229ENST00000592771 PCDHB15Q9Y5E8 787 aa18.1■□□□□ 0.49
RANBP3-229ENST00000592771 CRB1P82279 1406 aa18.09■□□□□ 0.49
RANBP3-229ENST00000592771 NCOA3Q9Y6Q9 1424 aa18.09■□□□□ 0.49
RANBP3-229ENST00000592771 C1orf167Q5SNV9 1468 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms